RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 RSRC2Q7L4I2 434 aaKnown RBP19.48■□□□□ 0.71
SPG7-201ENST00000268704 CABP5Q9NP86 173 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 STRN4Q9NRL3 753 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 LIFRP42702 1097 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
SPG7-201ENST00000268704 RTN1Q16799 776 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 MLKLQ8NB16 471 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 HOOK1Q9UJC3 728 aaKnown RBP19.47■□□□□ 0.71
SPG7-201ENST00000268704 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 TNS2Q63HR2 1409 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 IRS4O14654 1257 aaPredicted RBP19.47■□□□□ 0.71
SPG7-201ENST00000268704 RAD9BQ6WBX8 426 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 STK36Q9NRP7 1315 aa19.47■□□□□ 0.71
SPG7-201ENST00000268704 MYO1BO43795 1136 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 CD44P16070 742 aaKnown RBP19.46■□□□□ 0.71
SPG7-201ENST00000268704 NR1I3Q14994 352 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 NT5DC1Q5TFE4 455 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 NUTM2AQ8IVF1 878 aaPredicted RBP19.46■□□□□ 0.71
SPG7-201ENST00000268704 GPR161Q8N6U8 529 aaKnown RBP19.46■□□□□ 0.71
SPG7-201ENST00000268704 EPSTI1Q96J88 318 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 PUF60Q9UHX1 559 aaKnown RBP19.46■□□□□ 0.71
SPG7-201ENST00000268704 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
SPG7-201ENST00000268704 AKNAD1Q5T1N1 836 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 ZFP91Q96JP5 570 aaPredicted RBP19.46■□□□□ 0.71
SPG7-201ENST00000268704 TMOD3Q9NYL9 352 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 STRCP1A6NGW2 1772 aa19.46■□□□□ 0.71
SPG7-201ENST00000268704 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 PATL2C9JE40 543 aaKnown RBP19.45■□□□□ 0.7
SPG7-201ENST00000268704 RBL2Q08999 1139 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 RASGRF1Q13972 1273 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 MFSD6Q6ZSS7 791 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 TRIM22Q8IYM9 498 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 LCORLQ8N3X6 602 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 MIGA1Q8NAN2 632 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
SPG7-201ENST00000268704 IL2RBP14784 551 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 ARID4AP29374 1257 aaPredicted RBP19.45■□□□□ 0.7
SPG7-201ENST00000268704 EARS2Q5JPH6 523 aaKnown RBP19.45■□□□□ 0.7
SPG7-201ENST00000268704 GIGYF2Q6Y7W6 1299 aaKnown RBP19.45■□□□□ 0.7
SPG7-201ENST00000268704 STAMQ92783 540 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 LRP6O75581 1613 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 MAP3K15Q6ZN16 1313 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 WNT7AO00755 349 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 TDO2P48775 406 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 PLCD1P51178 756 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 RILPL1Q5EBL4 403 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 SPATA5Q8NB90 893 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 RGS22Q8NE09 1264 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 UBXN6Q9BZV1 441 aa19.45■□□□□ 0.7
SPG7-201ENST00000268704 GOLGA6L9A6NEM1 432 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 TPM1P09493 284 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 WTAPQ15007 396 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 APTXQ7Z2E3 356 aaKnown RBP19.44■□□□□ 0.7
SPG7-201ENST00000268704 ARFGAP3Q9NP61 516 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 A0A1B0GTH6 734 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 AKR1B15C9JRZ8 316 aaPredicted RBP19.44■□□□□ 0.7
SPG7-201ENST00000268704 ABL1P00519 1130 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 NKX1-1Q15270 411 aaPredicted RBP19.44■□□□□ 0.7
SPG7-201ENST00000268704 ZNF512BQ96KM6 892 aaPredicted RBP19.44■□□□□ 0.7
SPG7-201ENST00000268704 FUT8Q9BYC5 575 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 TOGARAM1Q9Y4F4 1720 aa19.44■□□□□ 0.7
SPG7-201ENST00000268704 PRDM1O75626 825 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 CRACR2BQ8N4Y2 399 aaPredicted RBP19.43■□□□□ 0.7
SPG7-201ENST00000268704 IGSF22Q8N9C0 903 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 FOXP1Q9H334 677 aaPredicted RBP19.43■□□□□ 0.7
SPG7-201ENST00000268704 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 CALCOCO1Q9P1Z2 691 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 DACH1Q9UI36 760 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 SRPRBQ9Y5M8 271 aaKnown RBP19.43■□□□□ 0.7
SPG7-201ENST00000268704 CCDC175P0C221 793 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 NOM1Q5C9Z4 860 aaKnown RBP19.43■□□□□ 0.7
SPG7-201ENST00000268704 WASF1Q92558 559 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 GOLGA1Q92805 767 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
SPG7-201ENST00000268704 MYH3P11055 1940 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 PLEKHG2Q9H7P9 1386 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 PIGBQ92521 554 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 RABGGTAQ92696 567 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 ADGRG1Q9Y653 693 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 MYH8P13535 1937 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 SYNRGQ9UMZ2 1314 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 H3BQF6 201 aa19.42■□□□□ 0.7
SPG7-201ENST00000268704 CDHR2Q9BYE9 1310 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 MYH6P13533 1939 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 DEXIO95424 95 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 PUM3Q15397 648 aaKnown RBP19.41■□□□□ 0.7
SPG7-201ENST00000268704 ALX1Q15699 326 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 LONRF2Q1L5Z9 754 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 ZNF654Q8IZM8 581 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 CASP14P31944 242 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 CCT6AP40227 531 aaKnown RBP19.41■□□□□ 0.7
SPG7-201ENST00000268704 CHMP4BP1P59074 171 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 ELOA2Q8IYF1 753 aaPredicted RBP19.41■□□□□ 0.7
SPG7-201ENST00000268704 SPATA20Q8TB22 786 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 KRT23Q9C075 422 aa19.41■□□□□ 0.7
SPG7-201ENST00000268704 IQSEC3Q9UPP2 1182 aaPredicted RBP19.41■□□□□ 0.7
SPG7-201ENST00000268704 TXLNAP40222 546 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms