RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 DHX8Q14562 1220 aaKnown RBP19.53■□□□□ 0.72
FOXA1-201ENST00000250448 MYSM1Q5VVJ2 828 aa19.53■□□□□ 0.72
FOXA1-201ENST00000250448 BRAPQ7Z569 592 aa19.53■□□□□ 0.72
FOXA1-201ENST00000250448 ZNF622Q969S3 477 aaKnown RBP eCLIP19.53■□□□□ 0.72
FOXA1-201ENST00000250448 EPB41L4AQ9HCS5 686 aaPredicted RBP19.53■□□□□ 0.72
FOXA1-201ENST00000250448 BBOX1O75936 387 aa19.53■□□□□ 0.72
FOXA1-201ENST00000250448 DYNLL1P63167 89 aaKnown RBP19.53■□□□□ 0.72
FOXA1-201ENST00000250448 IMMTQ16891 758 aaKnown RBP19.53■□□□□ 0.72
FOXA1-201ENST00000250448 LEMD3Q9Y2U8 911 aa19.53■□□□□ 0.72
FOXA1-201ENST00000250448 BIN1O00499 593 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 NRDCO43847 1150 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 BAG6P46379 1132 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 FBXO18Q8NFZ0 1043 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 NBPF3Q9H094 633 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 GGA1Q9UJY5 639 aa19.52■□□□□ 0.72
FOXA1-201ENST00000250448 RIMBP2O15034 1052 aa19.52■□□□□ 0.71
FOXA1-201ENST00000250448 NCAPHQ15003 741 aa19.52■□□□□ 0.71
FOXA1-201ENST00000250448 GRIK5Q16478 980 aa19.52■□□□□ 0.71
FOXA1-201ENST00000250448 SDR42E1Q8WUS8 393 aa19.52■□□□□ 0.71
FOXA1-201ENST00000250448 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.71
FOXA1-201ENST00000250448 GOLGA8BA8MQT2 603 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 ZNF202O95125 648 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 CHRNA5P30532 468 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 SYT10Q6XYQ8 523 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 SLC4A4Q9Y6R1 1079 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 MYH13Q9UKX3 1938 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 KLF18A0A0U1RQI7 1052 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 ZNF213O14771 459 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
FOXA1-201ENST00000250448 TBC1D16Q8TBP0 767 aa19.51■□□□□ 0.71
FOXA1-201ENST00000250448 SMIM22K7EJ46 135 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 MECOMQ03112 1051 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 TERF2Q15554 542 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 TBC1D10CQ8IV04 446 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 GSG1L2A8MUP6 293 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 PRC1O43663 620 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 PFKFB1P16118 471 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 CTDSPL2Q05D32 466 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 AXDND1Q5T1B0 1012 aaPredicted RBP19.5■□□□□ 0.71
FOXA1-201ENST00000250448 ANO1Q5XXA6 986 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 IFNL3Q8IZI9 196 aa19.5■□□□□ 0.71
FOXA1-201ENST00000250448 RGPD3A6NKT7 1758 aaPredicted RBP19.49■□□□□ 0.71
FOXA1-201ENST00000250448 RGPD4Q7Z3J3 1758 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 KIF28PB7ZC32 967 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 TUBB4AP04350 444 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 NPR1P16066 1061 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 CCDC93Q567U6 631 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 C2CD5Q86YS7 1000 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 COL11A2P13942 1736 aaPredicted RBP19.49■□□□□ 0.71
FOXA1-201ENST00000250448 MROH7-TTC4A0A0A0MT08 1334 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 NRXN2Q9P2S2 1712 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 VGLL3A8MV65 326 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 H2AFXP16104 143 aaPredicted RBP19.49■□□□□ 0.71
FOXA1-201ENST00000250448 CMA1P23946 247 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 PDE6BP35913 854 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 FANCCQ00597 558 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 MB21D2Q8IYB1 491 aaPredicted RBP19.49■□□□□ 0.71
FOXA1-201ENST00000250448 NSUN4Q96CB9 384 aaKnown RBP19.49■□□□□ 0.71
FOXA1-201ENST00000250448 NAPBQ9H115 298 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 ZNF446Q9NWS9 450 aa19.49■□□□□ 0.71
FOXA1-201ENST00000250448 CACNA1SQ13698 1873 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 MAGEB6P1A0A0J9YX57 407 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 PATL2C9JE40 543 aaKnown RBP19.48■□□□□ 0.71
FOXA1-201ENST00000250448 IKBKBO14920 756 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 KIF23Q02241 960 aaPredicted RBP19.48■□□□□ 0.71
FOXA1-201ENST00000250448 ERCC6LQ2NKX8 1250 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 TAF3Q5VWG9 929 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 ZNF804AQ7Z570 1209 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 CPLX1O14810 134 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 SEMA3EO15041 775 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 ATP2B4P23634 1241 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 LMOD1P29536 600 aaPredicted RBP19.48■□□□□ 0.71
FOXA1-201ENST00000250448 LRRN4CLQ8ND94 238 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 GJB4Q9NTQ9 266 aa19.48■□□□□ 0.71
FOXA1-201ENST00000250448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.48■□□□□ 0.71
FOXA1-201ENST00000250448 TDO2P48775 406 aa19.47■□□□□ 0.71
FOXA1-201ENST00000250448 RAB11FIP4Q86YS3 637 aa19.47■□□□□ 0.71
FOXA1-201ENST00000250448 CD209Q9NNX6 404 aa19.47■□□□□ 0.71
FOXA1-201ENST00000250448 AATFQ9NY61 560 aaKnown RBP eCLIP19.47■□□□□ 0.71
FOXA1-201ENST00000250448 ATP6V0A2Q9Y487 856 aa19.47■□□□□ 0.71
FOXA1-201ENST00000250448 TACC3Q9Y6A5 838 aa19.47■□□□□ 0.71
FOXA1-201ENST00000250448 CCP110O43303 1012 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 ANTXR2P58335 489 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 DIXDC1Q155Q3 683 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 SP8Q8IXZ3 490 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 MASTLQ96GX5 879 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 RIOK1Q9BRS2 568 aaKnown RBP19.46■□□□□ 0.71
FOXA1-201ENST00000250448 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 SLC4A8Q2Y0W8 1093 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 TIGD1Q96MW7 591 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 PHLPP2Q6ZVD8 1323 aa19.46■□□□□ 0.71
FOXA1-201ENST00000250448 WDHD1O75717 1129 aaPredicted RBP19.45■□□□□ 0.7
FOXA1-201ENST00000250448 ATP1A3P13637 1013 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 EVX2Q03828 476 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
FOXA1-201ENST00000250448 DZIP1Q86YF9 867 aaKnown RBP19.45■□□□□ 0.7
FOXA1-201ENST00000250448 HOMER1Q86YM7 354 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms