RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX39A-201ENST00000242776 LRP2BPQ9P2M1 347 aa16.99■□□□□ 0.31
DDX39A-201ENST00000242776 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
DDX39A-201ENST00000242776 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
DDX39A-201ENST00000242776 Q3C1V9 767 aa16.98■□□□□ 0.31
DDX39A-201ENST00000242776 GPR153Q6NV75 609 aa16.98■□□□□ 0.31
DDX39A-201ENST00000242776 NOL10Q9BSC4 688 aaKnown RBP16.98■□□□□ 0.31
DDX39A-201ENST00000242776 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
DDX39A-201ENST00000242776 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
DDX39A-201ENST00000242776 PORCNQ9H237 461 aa16.98■□□□□ 0.31
DDX39A-201ENST00000242776 SNRKQ9NRH2 765 aa16.98■□□□□ 0.31
DDX39A-201ENST00000242776 UNC80Q8N2C7 3258 aa16.97■□□□□ 0.31
DDX39A-201ENST00000242776 BACE1P56817 501 aa16.97■□□□□ 0.31
DDX39A-201ENST00000242776 ZYXQ15942 572 aaKnown RBP16.97■□□□□ 0.31
DDX39A-201ENST00000242776 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
DDX39A-201ENST00000242776 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
DDX39A-201ENST00000242776 CRACR2BQ8N4Y2 399 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-201ENST00000242776 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
DDX39A-201ENST00000242776 RBPJLQ9UBG7 517 aa16.97■□□□□ 0.31
DDX39A-201ENST00000242776 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
DDX39A-201ENST00000242776 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
DDX39A-201ENST00000242776 WDR78Q5VTH9 848 aa16.96■□□□□ 0.31
DDX39A-201ENST00000242776 SOCS4Q8WXH5 440 aa16.96■□□□□ 0.31
DDX39A-201ENST00000242776 COL25A1Q9BXS0 654 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-201ENST00000242776 PI4KBQ9UBF8 816 aa16.96■□□□□ 0.31
DDX39A-201ENST00000242776 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
DDX39A-201ENST00000242776 COL2A1P02458 1487 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-201ENST00000242776 MCAMP43121 646 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 ATN1P54259 1190 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-201ENST00000242776 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 ERVK-24P63145 666 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 GPR142Q7Z601 462 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 WDR18Q9BV38 432 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
DDX39A-201ENST00000242776 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-201ENST00000242776 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 HDAC5Q9UQL6 1122 aa16.95■□□□□ 0.3
DDX39A-201ENST00000242776 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 ASNSP08243 561 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 COL6A1P12109 1028 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 CNGA1P29973 690 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 MAPK4P31152 587 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 RGS2P41220 211 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 LHX8Q68G74 356 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 PLEKHH3Q7Z736 793 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
DDX39A-201ENST00000242776 XRCC5P13010 732 aaKnown RBP16.93■□□□□ 0.3
DDX39A-201ENST00000242776 HOXA7P31268 230 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-201ENST00000242776 NAA16Q6N069 864 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-201ENST00000242776 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 DNAH12Q6ZR08 3092 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 MYH1P12882 1939 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 MAST2Q6P0Q8 1798 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 ZBTB22O15209 634 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 ARID4AP29374 1257 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-201ENST00000242776 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDX39A-201ENST00000242776 GUCD1Q96NT3 240 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 LBHD1Q9BQE6 289 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-201ENST00000242776 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 FLRT1Q9NZU1 646 aa16.93■□□□□ 0.3
DDX39A-201ENST00000242776 FLT1P17948 1338 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 BAG3O95817 575 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-201ENST00000242776 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-201ENST00000242776 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-201ENST00000242776 TTC39AQ5SRH9 613 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 MORN1Q5T089 497 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 TRMT44Q8IYL2 757 aaKnown RBP16.92■□□□□ 0.3
DDX39A-201ENST00000242776 USP6NLQ92738 828 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 APBA2Q99767 749 aa16.92■□□□□ 0.3
DDX39A-201ENST00000242776 DHX36Q9H2U1 1008 aaKnown RBP16.92■□□□□ 0.3
DDX39A-201ENST00000242776 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-201ENST00000242776 DYNLL1P63167 89 aaKnown RBP16.91■□□□□ 0.3
DDX39A-201ENST00000242776 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX39A-201ENST00000242776 FEZ1Q99689 392 aa16.91■□□□□ 0.3
DDX39A-201ENST00000242776 LAMA2P24043 3122 aaKnown RBP16.9■□□□□ 0.3
DDX39A-201ENST00000242776 GH2P01242 217 aa16.9■□□□□ 0.3
DDX39A-201ENST00000242776 GNAI3P08754 354 aa16.9■□□□□ 0.3
DDX39A-201ENST00000242776 UQCRFS1P1P0C7P4 283 aa16.9■□□□□ 0.3
DDX39A-201ENST00000242776 MAP2K5Q13163 448 aa16.9■□□□□ 0.3
DDX39A-201ENST00000242776 USP17L2Q6R6M4 530 aa16.9■□□□□ 0.3
DDX39A-201ENST00000242776 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
DDX39A-201ENST00000242776 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
DDX39A-201ENST00000242776 PNMA6EA0A0J9YXQ4 647 aa16.89■□□□□ 0.29
DDX39A-201ENST00000242776 CNMDO75829 334 aa16.89■□□□□ 0.29
DDX39A-201ENST00000242776 MFSD14CQ5VZR4 134 aa16.89■□□□□ 0.29
DDX39A-201ENST00000242776 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
DDX39A-201ENST00000242776 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-201ENST00000242776 ATP11BQ9Y2G3 1177 aa16.89■□□□□ 0.29
DDX39A-201ENST00000242776 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
DDX39A-201ENST00000242776 CYP2C19P33261 490 aa16.88■□□□□ 0.29
DDX39A-201ENST00000242776 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
DDX39A-201ENST00000242776 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
DDX39A-201ENST00000242776 DBNDD2Q9BQY9 259 aa16.88■□□□□ 0.29
DDX39A-201ENST00000242776 POTEB2H3BUK9 544 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 PLCG2P16885 1265 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms