RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 RXRAP19793 462 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 LONRF3Q496Y0 759 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 MRFAP1L1Q96HT8 127 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 KIF22Q14807 665 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 POLR3CQ9BUI4 534 aaPredicted RBP16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 SLC8A1P32418 973 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 TUBB2AQ13885 445 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 IWS1Q96ST2 819 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 TUBB2BQ9BVA1 445 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 PALMDQ9NP74 551 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 SCINQ9Y6U3 715 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 A0A1B0GVL5 298 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 PRPF6O94906 941 aaKnown RBP16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 NOP14P78316 857 aaKnown RBP16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 SERPINI2O75830 405 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 GCNT3O95395 438 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 KIF11P52732 1056 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 LETM2Q2VYF4 491 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 RAPH1Q70E73 1250 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ZNF804AQ7Z570 1209 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 SPATA17Q96L03 361 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 FGD4Q96M96 766 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 HELLSQ9NRZ9 838 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 PDE4DQ08499 809 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 TTF2Q9UNY4 1162 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 LONP1P36776 959 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 BMP2KLQ5H9B9 411 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 KRT82Q9NSB4 513 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ANKRD20A4Q4UJ75 823 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ANKRD20A8PQ5CZ79 823 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ANKRD20A2Q5SQ80 823 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ANKRD20A1Q5TYW2 823 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 CARD6Q9BX69 1037 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 CCDC68Q9H2F9 335 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 MAN1A2O60476 641 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 PYGLP06737 847 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 SNCBQ16143 134 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 GDAP1L1Q96MZ0 367 aa16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 SPATS2LQ9NUQ6 558 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-201ENST00000216484 CTNNA1P35221 906 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 NUCB1Q02818 461 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 EP400NLQ6ZTU2 488 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 MRPL44Q9H9J2 332 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 TRPA1O75762 1119 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 ATP1A2P50993 1020 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 PARD3BQ8TEW8 1205 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 NVLO15381 856 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 MYL5Q02045 173 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 CAPN12Q6ZSI9 719 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 SKOR1P84550 965 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 RCN2Q14257 317 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 ZNF174Q15697 407 aa16.12■□□□□ 0.17
SPTLC2-201ENST00000216484 GTPBP10A4D1E9 387 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 SLC9C2Q5TAH2 1124 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 TBC1D32Q96NH3 1257 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 ANAPC5Q9UJX4 755 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 PFDN6O15212 129 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 ZSCAN26Q16670 478 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 TMEM259Q4ZIN3 620 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 MED10Q9BTT4 135 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 IPO11Q9UI26 975 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 IFNB1P01574 187 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 LRRC23Q53EV4 343 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 TRIM50Q86XT4 487 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 THAP12O43422 761 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 LPXNO60711 386 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 TRIM27P14373 513 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 BRD3Q15059 726 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 GPIHBP1Q8IV16 184 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 ATP6V0A1Q93050 837 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 NR1H4Q96RI1 486 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 NUP58Q9BVL2 599 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 RPS6KA1Q15418 735 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 GIMAP4Q9NUV9 329 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 EXOC7Q9UPT5 735 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 ITM2BQ9Y287 266 aa16.11■□□□□ 0.17
SPTLC2-201ENST00000216484 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 FBXW4P57775 412 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 IFT122Q9HBG6 1241 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 MAD1L1Q9Y6D9 718 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 SDSP20132 328 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 FAM186BQ8IYM0 893 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 CSGALNACT2Q8N6G5 542 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 GSTA4O15217 222 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 FLOT1O75955 427 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms