RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 HMGCS2P54868 508 aa30.08■■■□□ 2.41
TSR3-201ENST00000007390 HDAC1Q13547 482 aaPredicted RBP30.08■■■□□ 2.41
TSR3-201ENST00000007390 TREML2Q5T2D2 321 aa30.08■■■□□ 2.41
TSR3-201ENST00000007390 SDR42E1Q8WUS8 393 aa30.08■■■□□ 2.41
TSR3-201ENST00000007390 MCM9Q9NXL9 1143 aa30.08■■■□□ 2.41
TSR3-201ENST00000007390 MYH7P12883 1935 aa30.08■■■□□ 2.41
TSR3-201ENST00000007390 POLR3DP05423 398 aaPredicted RBP30.07■■■□□ 2.4
TSR3-201ENST00000007390 SHROOM1Q2M3G4 852 aaPredicted RBP30.07■■■□□ 2.4
TSR3-201ENST00000007390 TSHZ3Q63HK5 1081 aa30.07■■■□□ 2.4
TSR3-201ENST00000007390 KBTBD3Q8NAB2 608 aa30.07■■■□□ 2.4
TSR3-201ENST00000007390 ATP8A2Q9NTI2 1148 aa30.07■■■□□ 2.4
TSR3-201ENST00000007390 PNMA3Q9UL41 463 aa30.07■■■□□ 2.4
TSR3-201ENST00000007390 TAOK2Q9UL54 1235 aa30.07■■■□□ 2.4
TSR3-201ENST00000007390 CHGBP05060 677 aa30.06■■■□□ 2.4
TSR3-201ENST00000007390 SOX10P56693 466 aa30.06■■■□□ 2.4
TSR3-201ENST00000007390 BACE1P56817 501 aa30.06■■■□□ 2.4
TSR3-201ENST00000007390 GABPAQ06546 454 aa30.06■■■□□ 2.4
TSR3-201ENST00000007390 GH2P01242 217 aa30.05■■■□□ 2.4
TSR3-201ENST00000007390 SHMT1P34896 483 aa30.05■■■□□ 2.4
TSR3-201ENST00000007390 PRMT2P55345 433 aa30.05■■■□□ 2.4
TSR3-201ENST00000007390 PABPC4Q13310 644 aaKnown RBP eCLIP30.05■■■□□ 2.47e-52■■■■■ 172.4
TSR3-201ENST00000007390 MTMR2Q13614 643 aa30.05■■■□□ 2.4
TSR3-201ENST00000007390 ARMC5Q96C12 935 aa30.05■■■□□ 2.4
TSR3-201ENST00000007390 CENPFP49454 3210 aa30.04■■■□□ 2.4
TSR3-201ENST00000007390 SMCR8Q8TEV9 937 aaPredicted RBP30.04■■■□□ 2.4
TSR3-201ENST00000007390 GCC1Q96CN9 775 aa30.04■■■□□ 2.4
TSR3-201ENST00000007390 ZSWIM8A7E2V4 1837 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 C19orf81C9J6K1 198 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 ERC2O15083 957 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 PRKAB2O43741 272 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 CTGFP29279 349 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 PSMC4P43686 418 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 MLLT1Q03111 559 aaPredicted RBP30.03■■■□□ 2.4
TSR3-201ENST00000007390 CERKLQ49MI3 558 aaPredicted RBP30.03■■■□□ 2.4
TSR3-201ENST00000007390 TRIM47Q96LD4 638 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 PTCH2Q9Y6C5 1203 aa30.03■■■□□ 2.4
TSR3-201ENST00000007390 USP17L10C9JJH3 530 aa30.02■■■□□ 2.4
TSR3-201ENST00000007390 PI4K2BQ8TCG2 481 aa30.02■■■□□ 2.4
TSR3-201ENST00000007390 OTUD7AQ8TE49 926 aaPredicted RBP30.02■■■□□ 2.4
TSR3-201ENST00000007390 PUS7LQ9H0K6 701 aaKnown RBP30.02■■■□□ 2.4
TSR3-201ENST00000007390 TMOD4Q9NZQ9 345 aa30.02■■■□□ 2.4
TSR3-201ENST00000007390 SALL3Q9BXA9 1300 aa30.01■■■□□ 2.4
TSR3-201ENST00000007390 GLRX3O76003 335 aaKnown RBP30.01■■■□□ 2.39
TSR3-201ENST00000007390 ABCB5Q2M3G0 1257 aa30.01■■■□□ 2.39
TSR3-201ENST00000007390 ZFYP08048 801 aaPredicted RBP30■■■□□ 2.39
TSR3-201ENST00000007390 MX1P20591 662 aa30■■■□□ 2.39
TSR3-201ENST00000007390 EVX2Q03828 476 aa30■■■□□ 2.39
TSR3-201ENST00000007390 FMNL1O95466 1100 aaPredicted RBP29.99■■■□□ 2.39
TSR3-201ENST00000007390 CYP2D6P10635 497 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 OSBPP22059 807 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 HOXD10P28358 340 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 HOXA7P31268 230 aaPredicted RBP29.99■■■□□ 2.39
TSR3-201ENST00000007390 APPBP2Q92624 585 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 ASCC2Q9H1I8 757 aaPredicted RBP29.99■■■□□ 2.39
TSR3-201ENST00000007390 CABP5Q9NP86 173 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 ZBTB47Q9UFB7 747 aaPredicted RBP29.99■■■□□ 2.39
TSR3-201ENST00000007390 SRRDQ9UH36 339 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 SWAP70Q9UH65 585 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 SLC4A4Q9Y6R1 1079 aa29.99■■■□□ 2.39
TSR3-201ENST00000007390 RNF113AO15541 343 aaKnown RBP29.98■■■□□ 2.39
TSR3-201ENST00000007390 GCLCP48506 637 aaPredicted RBP29.98■■■□□ 2.39
TSR3-201ENST00000007390 FCGRTP55899 365 aa29.98■■■□□ 2.39
TSR3-201ENST00000007390 FAM110CQ1W6H9 321 aa29.98■■■□□ 2.39
TSR3-201ENST00000007390 ANKRD45Q5TZF3 282 aa29.98■■■□□ 2.39
TSR3-201ENST00000007390 DDRGK1Q96HY6 314 aa29.98■■■□□ 2.39
TSR3-201ENST00000007390 LRRFIP1Q32MZ4 808 aaKnown RBP29.97■■■□□ 2.39
TSR3-201ENST00000007390 SLC9C1Q4G0N8 1177 aa29.97■■■□□ 2.39
TSR3-201ENST00000007390 C12orf60Q5U649 245 aa29.97■■■□□ 2.39
TSR3-201ENST00000007390 USP17L2Q6R6M4 530 aa29.97■■■□□ 2.39
TSR3-201ENST00000007390 STRBPQ96SI9 672 aaKnown RBP29.97■■■□□ 2.39
TSR3-201ENST00000007390 RAB3GAP1Q15042 981 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 NBPF11Q86T75 865 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 AMOTL1Q8IY63 956 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 OSBP2Q969R2 916 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 ZNF333Q96JL9 665 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 C12orf42Q96LP6 360 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 EMILIN3Q9NT22 766 aa29.96■■■□□ 2.39
TSR3-201ENST00000007390 GUCY1A2P33402 732 aa29.95■■■□□ 2.39
TSR3-201ENST00000007390 ANKRD13CQ8N6S4 541 aa29.95■■■□□ 2.39
TSR3-201ENST00000007390 KIAA1683Q9H0B3 1180 aa29.95■■■□□ 2.39
TSR3-201ENST00000007390 USP17L12C9JPN9 530 aa29.94■■■□□ 2.38
TSR3-201ENST00000007390 USP17L21D6R901 530 aa29.94■■■□□ 2.38
TSR3-201ENST00000007390 ECM2O94769 699 aaPredicted RBP29.94■■■□□ 2.38
TSR3-201ENST00000007390 IRX3P78415 501 aaPredicted RBP29.94■■■□□ 2.38
TSR3-201ENST00000007390 SLC44A5Q8NCS7 719 aa29.94■■■□□ 2.38
TSR3-201ENST00000007390 FEZ1Q99689 392 aa29.94■■■□□ 2.38
TSR3-201ENST00000007390 STAP2Q9UGK3 403 aa29.94■■■□□ 2.38
TSR3-201ENST00000007390 BAZ2AQ9UIF9 1905 aaKnown RBP29.94■■■□□ 2.38
TSR3-201ENST00000007390 MYPNQ86TC9 1320 aa29.94■■■□□ 2.38
TSR3-201ENST00000007390 TNRC18O15417 2968 aaPredicted RBP29.94■■■□□ 2.38
TSR3-201ENST00000007390 USP14P54578 494 aa29.93■■■□□ 2.38
TSR3-201ENST00000007390 GIMAP6Q6P9H5 292 aa29.93■■■□□ 2.38
TSR3-201ENST00000007390 EXOC6Q8TAG9 804 aa29.93■■■□□ 2.38
TSR3-201ENST00000007390 DYNLL2Q96FJ2 89 aa29.93■■■□□ 2.38
TSR3-201ENST00000007390 RWDD1Q9H446 243 aaPredicted RBP29.93■■■□□ 2.38
TSR3-201ENST00000007390 SEPT2Q15019 361 aa29.92■■■□□ 2.38
TSR3-201ENST00000007390 CTR9Q6PD62 1173 aa29.92■■■□□ 2.38
TSR3-201ENST00000007390 SMC5Q8IY18 1101 aa29.92■■■□□ 2.38
TSR3-201ENST00000007390 ARPP21Q9UBL0 812 aaPredicted RBP29.92■■■□□ 2.38
TSR3-201ENST00000007390 MGAMO43451 1857 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms