RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Dnph1Q80VJ3 173 aa16.75■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Lrrd1Q8C0R9 853 aa16.75■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Apobec3Q99J72 440 aaKnown RBP16.75■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Epb41l2O70318 988 aaKnown RBP16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 PparaP23204 468 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Sept1P42209 366 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Rasal3Q8C2K5 1041 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Lrrc59Q922Q8 307 aaKnown RBP16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ndufb9Q9CQJ8 179 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Mfap3lQ9D3X9 409 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Myo1cQ9WTI7 1063 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Nkx2-5P42582 318 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Slc27a1Q60714 646 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Hps6Q8BLY7 805 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Rbm28Q8CGC6 750 aaKnown RBP16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Kcnq5Q9JK45 933 aa16.74■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Slc4a4O88343 1079 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Gjb4Q02738 266 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 AbraQ8BUZ1 375 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Q8C1R3 189 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Apol10aQ8CCA5 318 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Nod2Q8K3Z0 1020 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Abca15E9PWH4 1668 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Gcom1E9PZ54 550 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Pde8bE9Q4S1 865 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Trap1aP19473 224 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Tdo2P48776 406 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Chp1P61022 195 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 MyzapQ3UIJ9 466 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ccnl1Q52KE7 532 aaKnown RBP16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 MmeQ61391 750 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Sval3Q76I99 144 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Nek5Q7TSC3 627 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Cfap100Q80VN0 613 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ccdc73Q8CDM4 1066 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ubac1Q8VDI7 409 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Nip7Q9CXK8 180 aaKnown RBP16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Mroh6V9GX81 722 aa16.73■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Cul4bA2A432 970 aaKnown RBP16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Cyp7a1Q64505 503 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Fhod1Q6P9Q4 1197 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ttc12Q8BW49 704 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Gm43738A0A0G2JEA5 862 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Gm5580A0A0N4SVP8 411 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 A0A1Y7VML8 143 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Srgap2Q91Z67 1071 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Kdm3aQ6PCM1 1323 aa16.72■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Tbc1d8bA3KGB4 1114 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ano2Q8CFW1 1002 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Wasf1Q8R5H6 559 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Mfap3Q922T2 349 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Foxo3Q9WVH4 672 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Scgb2b18A0A087WPA9 112 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Zscan20B2KFW1 1030 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 RragbQ6NTA4 374 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Ccdc93Q7TQK5 629 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Terb1Q8C0V1 768 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Smc2Q8CG48 1191 aaKnown RBP16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Riok1Q922Q2 567 aa16.71■□□□□ 0.27
Tpm1-209ENSMUST00000113690 Pbx1P41778 430 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Ckap2Q3V1H1 664 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Cep128Q8BI22 1102 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Sash3Q8K352 380 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Klhl10Q9D5V2 608 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Fam217aQ9D9W6 419 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Itga2bQ9QUM0 1033 aa16.71■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Rexo5D3YW29 759 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Enc1O35709 589 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Myl3P09542 204 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tmem232Q5K6N0 675 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Cep112Q5PR68 954 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Slc44a1Q6X893 653 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Myh6Q02566 1938 aaKnown RBP16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Atf3Q60765 181 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 NapgQ9CWZ7 312 aa16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tnrc6cQ3UHC0 1690 aaKnown RBP16.7■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Setdb1O88974 1307 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Pcdha12Q91Y18 950 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Egfl6Q9JJZ5 550 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Thsd7aQ69ZU6 1645 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 HrQ61645 1182 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Exoc8Q6PGF7 716 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Q8K2W9 541 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Gpr108Q91WD0 569 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Syf2Q9D198 242 aaKnown RBP16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Popdc2Q9ES82 367 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Zfp142G5E869 1843 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Igsf9bE9PZ19 1328 aa16.69■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Gm28042B7ZCM9 1014 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Slc20a2Q80UP8 656 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tbc1d5Q80XQ2 815 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Card14Q99KF0 999 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Krtap5-3Q9D226 196 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tpcn1Q9EQJ0 817 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tiam2Q6ZPF3 1715 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Ube3cQ80U95 1083 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Slfnl1Q8BHW9 410 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tmem39aQ9CYC3 486 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 Tube1Q9D6T1 475 aa16.68■□□□□ 0.26
Tpm1-209ENSMUST00000113690 AmfrQ9R049 643 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms