RNA–Protein interactions for RNA: ENSMUST00000030905.8

Ssu72-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssu72, Length 1,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72-201ENSMUST00000030905 Gpsm2Q8VDU0 679 aa20.49■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Clip2Q9Z0H8 1047 aa20.49■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Zscan18E9PUD6 809 aa20.48■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Smarce1O54941 411 aaKnown RBP20.48■□□□□ 0.87
Ssu72-201ENSMUST00000030905 DlatQ8BMF4 642 aa20.48■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Rbm28Q8CGC6 750 aaKnown RBP20.48■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Pms1Q8K119 917 aa20.48■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Telo2Q9DC40 840 aaKnown RBP20.48■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Usp31E9Q6Y8 1344 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Palm3A2TJV2 734 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 ArxO35085 564 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Mybl2P48972 704 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Mmp20P57748 482 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 9230110C19RikQ8CC70 267 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Pus7lQ8CE46 702 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Pes1Q9EQ61 584 aaKnown RBP20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Il21rQ9JHX3 529 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 SmapQ9R0P4 181 aaKnown RBP20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Ccdc88aQ5SNZ0 1873 aa20.47■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Atp8b3Q6UQ17 1335 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Sema3fO88632 785 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Ift74Q8BKE9 600 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Inpp5bQ8K337 993 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Kdm4cQ8VCD7 1054 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 BrapQ99MP8 591 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 WtapQ9ER69 396 aa20.46■□□□□ 0.87
Ssu72-201ENSMUST00000030905 Prr16A3KMN5 304 aa20.45■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Tmem59lQ7TNI2 337 aa20.45■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Spata21Q8BHW6 681 aa20.45■□□□□ 0.86
Ssu72-201ENSMUST00000030905 TbcaP48428 108 aaKnown RBP20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 PgfP49764 158 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Glra4Q61603 456 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Senp5Q6NXL6 749 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Ube2oQ6ZPJ3 1288 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Pof1bQ8K4L4 587 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Tut1Q8R3F9 869 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Trex1Q91XB0 314 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Mtmr4Q91XS1 1190 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Acot3Q9QYR7 432 aa20.44■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Fam71e1A1L3C1 212 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Vmn2r23E9PXI5 849 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Sept2P42208 361 aaKnown RBP20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Dnajc2P54103 621 aaKnown RBP20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Zfp953Q3UPV7 304 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Senp6Q6P7W0 1132 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Tacc1Q6Y685 774 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Ddx55Q6ZPL9 600 aaKnown RBP20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Suclg2Q9Z2I8 433 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Vwa3bJ9JI28 736 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 WaplQ65Z40 1200 aaKnown RBP20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Usp50Q6P8X6 390 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Ppp1r10Q80W00 888 aaKnown RBP20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Scfd2Q8BTY8 684 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Tubb6Q922F4 447 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Chmp4cQ9D7F7 232 aa20.43■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Frmpd4A2AFR3 1320 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Pagr1bF6V0H0 108 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Cxcl9P18340 126 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Alppl2P24823 529 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Scg2Q03517 617 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Ttll12Q3UDE2 639 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Slc10a4Q3UEZ8 437 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 VmacQ8BP01 174 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Calhm4Q8CE93 315 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Pagr1aQ99L02 253 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Tmem47Q9JJG6 181 aa20.42■□□□□ 0.86
Ssu72-201ENSMUST00000030905 SynrgQ5SV85 1306 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 A430078G23RikE9Q7Y4 484 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Prkg1P0C605 671 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 LrmpQ60664 539 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Nlgn2Q69ZK9 836 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Sirt2Q8VDQ8 389 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Ttll1Q91V51 423 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Mad2l2Q9D752 211 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Cnpy3Q9DAU1 276 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Trmt112Q9DCG9 125 aa20.41■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Myl3P09542 204 aa20.4■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Tomm22Q9CPQ3 142 aa20.4■□□□□ 0.86
Ssu72-201ENSMUST00000030905 Has3O08650 554 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Cyp26a1O55127 497 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Stx8O88983 236 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Usp5P56399 858 aaKnown RBP20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Znf697Q569E7 569 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Filip1lQ6P6L0 1131 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Garem2Q6PAJ3 880 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Zbtb39Q6PDK0 712 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Scfd1Q8BRF7 639 aaKnown RBP20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 DymQ8CHY3 669 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Ccdc47Q9D024 483 aaKnown RBP20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 PatjQ63ZW7 1834 aa20.39■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Naaladl2A0A0N4SUJ3 795 aa20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Mmp10O55123 476 aa20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Syt1P46096 421 aa20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Atp6v1dP57746 247 aa20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Trpv1Q704Y3 839 aa20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Ireb2Q811J3 963 aaKnown RBP20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Nop2Q922K7 793 aaKnown RBP20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 S1pr4Q9Z0L1 386 aa20.38■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Stat1P42225 749 aa20.37■□□□□ 0.85
Ssu72-201ENSMUST00000030905 Irx3P81067 507 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms