RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Igsf10Q3V1M1 2594 aa3.99□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 NipblQ6KCD5 2798 aaKnown RBP3.98□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 9530053A07RikE9PVG8 2581 aa3.96□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 Nbeal2Q6ZQA0 2742 aa3.96□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 1700042G07RikB1AUF7 90 aa3.95□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 Mast4Q811L6 2618 aa3.93□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 Myo18bE9PV66 2605 aa3.93□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 FlnaQ8BTM8 2647 aaKnown RBP3.92□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 Smg1Q8BKX6 3658 aaKnown RBP3.92□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 Csmd1Q923L3 3564 aa3.92□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 RelnQ60841 3461 aa3.92□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 B930094E09RikQ8C4T2 136 aa3.92□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 FrylF8VQ05 3007 aa3.9□□□□□ -1.78
Rc3h1-202ENSMUST00000161609 Ubr5Q80TP3 2792 aa3.88□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 Myo15bI7HPW8 3033 aa3.87□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 2310046K23RikA0A0A6YVW6 87 aa3.86□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 Zfhx4Q9JJN2 3550 aa3.86□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 Trank1Q8BV79 2999 aa3.85□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 LorP18165 486 aa3.85□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 Krtap8-1O08633 61 aa3.84□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 Adgrg4B7ZCC9 3073 aa3.84□□□□□ -1.79
Rc3h1-202ENSMUST00000161609 Akap9Q70FJ1 3797 aa3.83□□□□□ -1.8
Rc3h1-202ENSMUST00000161609 Gm19668J3QMD1 248 aa3.82□□□□□ -1.8
Rc3h1-202ENSMUST00000161609 Stab2Q8R4U0 2559 aa3.82□□□□□ -1.8
Rc3h1-202ENSMUST00000161609 FcgbpE9Q0B5 2583 aa3.82□□□□□ -1.8
Rc3h1-202ENSMUST00000161609 2310079G19RikQ9D6L6 185 aa3.8□□□□□ -1.8
Rc3h1-202ENSMUST00000161609 Chd9Q8BYH8 2885 aa3.77□□□□□ -1.81
Rc3h1-202ENSMUST00000161609 Chd7A2AJK6 2986 aaKnown RBP3.75□□□□□ -1.81
Rc3h1-202ENSMUST00000161609 Gm38119A0A0A6YX29 146 aa3.74□□□□□ -1.81
Rc3h1-202ENSMUST00000161609 LrbaQ9ESE1 2856 aa3.73□□□□□ -1.81
Rc3h1-202ENSMUST00000161609 Fbn2Q61555 2907 aa3.73□□□□□ -1.81
Rc3h1-202ENSMUST00000161609 Tenm2Q9WTS5 2764 aa3.71□□□□□ -1.81
Rc3h1-202ENSMUST00000161609 Igfn1Q3KNY0 2849 aa3.71□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Pkd1l1Q8R526 2615 aa3.71□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Itpr1P11881 2749 aa3.7□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Krtap19-5O08632 62 aa3.7□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Csmd2V9GX34 3611 aa3.69□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Gm11565A2A4M7 156 aa3.67□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 DspE9Q557 2883 aaKnown RBP3.67□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Krtap13-1Q8K198 168 aa3.66□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Prrc2cQ3TLH4 2846 aaKnown RBP3.66□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Krtap7-1Q9D3I6 87 aa3.66□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Gm40193A0A1B0GT39 78 aa3.65□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Tenm4Q3UHK6 2771 aa3.65□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Gcn1E9PVA8 2671 aaKnown RBP3.65□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Hivep1Q03172 2688 aa3.65□□□□□ -1.82
Rc3h1-202ENSMUST00000161609 Col6a5A6H584 2640 aa3.64□□□□□ -1.83
Rc3h1-202ENSMUST00000161609 DmdP11531 3678 aa3.63□□□□□ -1.83
Rc3h1-202ENSMUST00000161609 Vps13cQ8BX70 3748 aa3.63□□□□□ -1.83
Rc3h1-202ENSMUST00000161609 Muc4Q8JZM8 3443 aa3.62□□□□□ -1.83
Rc3h1-202ENSMUST00000161609 Sprr2fO70557 76 aa3.58□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Zzef1Q5SSH7 2924 aa3.58□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Lce1jD3YUU5 139 aa3.57□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Lce1gQ9D195 139 aa3.57□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Lce1iQ9D6P5 149 aa3.57□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Lce1hQ9D6R3 140 aa3.57□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 FlncQ8VHX6 2726 aaKnown RBP3.57□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 SpenQ62504 3644 aaKnown RBP3.56□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 ApcQ61315 2845 aa3.55□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Srrm2Q8BTI8 2703 aaKnown RBP3.55□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Cmya5Q70KF4 3739 aa3.54□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Lce1mQ9CR91 182 aa3.54□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Chd6A3KFM7 2711 aa3.53□□□□□ -1.84
Rc3h1-202ENSMUST00000161609 Celsr2Q9R0M0 2920 aa3.52□□□□□ -1.85
Rc3h1-202ENSMUST00000161609 CubnQ9JLB4 3623 aa3.49□□□□□ -1.85
Rc3h1-202ENSMUST00000161609 NbeaQ9EPN1 2936 aa3.48□□□□□ -1.85
Rc3h1-202ENSMUST00000161609 Itpr2Q9Z329 2701 aa3.48□□□□□ -1.85
Rc3h1-202ENSMUST00000161609 Gm11939A2A592 99 aa3.47□□□□□ -1.85
Rc3h1-202ENSMUST00000161609 Svep1A2AVA0 3567 aa3.47□□□□□ -1.85
Rc3h1-202ENSMUST00000161609 Lce3bQ9CQM7 98 aa3.46□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Sprr2iO70560 76 aa3.45□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Gm884A2A9H6 3643 aa3.45□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Utp20Q5XG71 2788 aaKnown RBP3.43□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Lama5Q61001 3718 aa3.42□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Lce3cQ91V05 98 aa3.41□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Krtap19-3Q925H6 87 aa3.4□□□□□ -1.86
Rc3h1-202ENSMUST00000161609 Tenm1Q9WTS4 2731 aa3.39□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 Tex15F8VPN2 2785 aa3.39□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 Pdzd2E9Q1M1 2796 aa3.38□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 VwfQ8CIZ8 2813 aa3.36□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 Gm17416Q30KP4 66 aa3.36□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 OtogO55225 2910 aa3.35□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 Csmd3Q80T79 3707 aa3.34□□□□□ -1.87
Rc3h1-202ENSMUST00000161609 Muc2Q80Z19 2680 aa3.33□□□□□ -1.88
Rc3h1-202ENSMUST00000161609 Huwe1Q7TMY8 4377 aaKnown RBP3.33□□□□□ -1.88
Rc3h1-202ENSMUST00000161609 Krtap19-9aF8WH65 55 aa3.32□□□□□ -1.88
Rc3h1-202ENSMUST00000161609 Gm10272F7CZ33 110 aa3.31□□□□□ -1.88
Rc3h1-202ENSMUST00000161609 LystP97412 3788 aa3.3□□□□□ -1.88
Rc3h1-202ENSMUST00000161609 Megf8P60882 2789 aa3.28□□□□□ -1.88
Rc3h1-202ENSMUST00000161609 Sprr2eO70556 76 aa3.26□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Hspg2Q05793 3707 aaKnown RBP3.26□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 TgO08710 2766 aa3.26□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Krtap4-2B1AQ85 167 aa3.25□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Col7a1Q63870 2944 aa3.25□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Mt4P47945 62 aa3.24□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Krtap9-5A2A5X3 358 aa3.23□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Krtap12-1Q9Z287 130 aa3.23□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Lce3eF8VQJ0 98 aa3.22□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Lce3fQ6PAI4 98 aa3.22□□□□□ -1.89
Rc3h1-202ENSMUST00000161609 Nf1Q04690 2841 aa3.22□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms