RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Krtap29-1A2A5X4 342 aa11.08□□□□□ -0.64
Upf1-201ENSMUST00000075666 CriptO70333 101 aa11.02□□□□□ -0.65
Upf1-201ENSMUST00000075666 2310061N02RikQ9D6S9 174 aa11.02□□□□□ -0.65
Upf1-201ENSMUST00000075666 Gm17349F7BGH6 99 aa11.02□□□□□ -0.65
Upf1-201ENSMUST00000075666 Smg1Q8BKX6 3658 aaKnown RBP10.97□□□□□ -0.65
Upf1-201ENSMUST00000075666 2310050C09RikG5E8Z3 280 aa10.94□□□□□ -0.66
Upf1-201ENSMUST00000075666 Krtap13O88375 197 aa10.94□□□□□ -0.66
Upf1-201ENSMUST00000075666 Pla2g10Q9QXX3 151 aa10.88□□□□□ -0.67
Upf1-201ENSMUST00000075666 Krtap14O08640 167 aa10.85□□□□□ -0.67
Upf1-201ENSMUST00000075666 Gm20538F6Z9R1 75 aa10.84□□□□□ -0.67
Upf1-201ENSMUST00000075666 Muc5acE9QAQ8 3455 aa10.8□□□□□ -0.68
Upf1-201ENSMUST00000075666 Rpl37Q9D823 97 aa10.77□□□□□ -0.69
Upf1-201ENSMUST00000075666 Romo1P60603 79 aa10.77□□□□□ -0.69
Upf1-201ENSMUST00000075666 OxtP35454 125 aa10.74□□□□□ -0.69
Upf1-201ENSMUST00000075666 Zfhx4Q9JJN2 3550 aa10.73□□□□□ -0.69
Upf1-201ENSMUST00000075666 Gm9507D3Z5T3 223 aa10.73□□□□□ -0.69
Upf1-201ENSMUST00000075666 FcgbpE9Q0B5 2583 aa10.73□□□□□ -0.69
Upf1-201ENSMUST00000075666 Tnp2P11378 117 aa10.72□□□□□ -0.69
Upf1-201ENSMUST00000075666 Gm884A2A9H6 3643 aa10.72□□□□□ -0.69
Upf1-201ENSMUST00000075666 Gm10382Q3V0T5 144 aa10.65□□□□□ -0.7
Upf1-201ENSMUST00000075666 D6Ertd527eA0A0N4SWI3 464 aa10.65□□□□□ -0.7
Upf1-201ENSMUST00000075666 Lama5Q61001 3718 aa10.63□□□□□ -0.71
Upf1-201ENSMUST00000075666 Cox6b2Q80ZN9 88 aa10.62□□□□□ -0.71
Upf1-201ENSMUST00000075666 Krtap15-1Q9QZU5 150 aa10.61□□□□□ -0.71
Upf1-201ENSMUST00000075666 OtogO55225 2910 aa10.61□□□□□ -0.71
Upf1-201ENSMUST00000075666 Krtap10-4Q08EG8 221 aa10.58□□□□□ -0.72
Upf1-201ENSMUST00000075666 Gm5767A0A0J9YTU8 78 aa10.53□□□□□ -0.72
Upf1-201ENSMUST00000075666 Tenm4Q3UHK6 2771 aa10.42□□□□□ -0.74
Upf1-201ENSMUST00000075666 Spink7Q6IE32 76 aa10.38□□□□□ -0.75
Upf1-201ENSMUST00000075666 Cmya5Q70KF4 3739 aa10.38□□□□□ -0.75
Upf1-201ENSMUST00000075666 Rps29P62274 56 aa10.38□□□□□ -0.75
Upf1-201ENSMUST00000075666 Svep1A2AVA0 3567 aa10.36□□□□□ -0.75
Upf1-201ENSMUST00000075666 Krtap10-10A0A1W2P7T6 217 aa10.36□□□□□ -0.75
Upf1-201ENSMUST00000075666 Muc4Q8JZM8 3443 aa10.35□□□□□ -0.75
Upf1-201ENSMUST00000075666 Gm20537G3UYK7 97 aa10.32□□□□□ -0.76
Upf1-201ENSMUST00000075666 Gm19426M0QWC7 77 aa10.29□□□□□ -0.76
Upf1-201ENSMUST00000075666 2310079G19RikQ9D6L6 185 aa10.29□□□□□ -0.76
Upf1-201ENSMUST00000075666 Tenm1Q9WTS4 2731 aa10.28□□□□□ -0.76
Upf1-201ENSMUST00000075666 BC029722A0A0N4SW31 51 aa10.26□□□□□ -0.77
Upf1-201ENSMUST00000075666 Ndufaf8A2AMZ4 74 aa10.21□□□□□ -0.78
Upf1-201ENSMUST00000075666 Fam229aB2KGE5 128 aa10.21□□□□□ -0.78
Upf1-201ENSMUST00000075666 A930033H14RikG5E8X6 103 aa10.19□□□□□ -0.78
Upf1-201ENSMUST00000075666 Gm2696A0A1W2P709 240 aa10.13□□□□□ -0.79
Upf1-201ENSMUST00000075666 Camk2n1Q6QWF9 78 aa10.11□□□□□ -0.79
Upf1-201ENSMUST00000075666 Fbn1Q61554 2873 aaKnown RBP10.07□□□□□ -0.8
Upf1-201ENSMUST00000075666 VwfQ8CIZ8 2813 aa10.04□□□□□ -0.8
Upf1-201ENSMUST00000075666 Sec61bQ9CQS8 96 aaKnown RBP9.93□□□□□ -0.82
Upf1-201ENSMUST00000075666 Tenm2Q9WTS5 2764 aa9.86□□□□□ -0.83
Upf1-201ENSMUST00000075666 Gm5965D3Z724 196 aa9.82□□□□□ -0.84
Upf1-201ENSMUST00000075666 Megf8P60882 2789 aa9.78□□□□□ -0.84
Upf1-201ENSMUST00000075666 LystP97412 3788 aa9.72□□□□□ -0.85
Upf1-201ENSMUST00000075666 Gm9112A2AI92 75 aa9.72□□□□□ -0.85
Upf1-201ENSMUST00000075666 Gm40193A0A1B0GT39 78 aa9.71□□□□□ -0.86
Upf1-201ENSMUST00000075666 Csmd2V9GX34 3611 aa9.71□□□□□ -0.86
Upf1-201ENSMUST00000075666 B930094E09RikQ8C4T2 136 aa9.68□□□□□ -0.86
Upf1-201ENSMUST00000075666 Gm21887J3QQ04 176 aa9.66□□□□□ -0.86
Upf1-201ENSMUST00000075666 Krtap3-2Q9D638 99 aa9.62□□□□□ -0.87
Upf1-201ENSMUST00000075666 Krtap3-3Q9D7P0 99 aa9.62□□□□□ -0.87
Upf1-201ENSMUST00000075666 Ank2Q8C8R3 3898 aa9.6□□□□□ -0.87
Upf1-201ENSMUST00000075666 Prm2P07978 107 aa9.57□□□□□ -0.88
Upf1-201ENSMUST00000075666 CubnQ9JLB4 3623 aa9.55□□□□□ -0.88
Upf1-201ENSMUST00000075666 Gm11939A2A592 99 aa9.55□□□□□ -0.88
Upf1-201ENSMUST00000075666 Col7a1Q63870 2944 aa9.52□□□□□ -0.89
Upf1-201ENSMUST00000075666 Gm17416Q30KP4 66 aa9.51□□□□□ -0.89
Upf1-201ENSMUST00000075666 Muc6Q80T03 2850 aa9.47□□□□□ -0.89
Upf1-201ENSMUST00000075666 Gm9918Q8BUR5 174 aa9.4□□□□□ -0.9
Upf1-201ENSMUST00000075666 2310057N15RikQ9D6T8 200 aa9.39□□□□□ -0.91
Upf1-201ENSMUST00000075666 2210017I01RikA0A0A6YVV1 95 aa9.39□□□□□ -0.91
Upf1-201ENSMUST00000075666 Gm9736A0A1W2P7N1 277 aa9.35□□□□□ -0.91
Upf1-201ENSMUST00000075666 Tnp1P10856 55 aa9.29□□□□□ -0.92
Upf1-201ENSMUST00000075666 Gm17402F6Z0L5 76 aa9.2□□□□□ -0.94
Upf1-201ENSMUST00000075666 Dnah14A0A140LIJ4 4489 aa9.14□□□□□ -0.95
Upf1-201ENSMUST00000075666 Xirp2Q4U4S6 3784 aa9.12□□□□□ -0.95
Upf1-201ENSMUST00000075666 Krtap3-1A2A591 98 aa9.1□□□□□ -0.95
Upf1-201ENSMUST00000075666 Hspg2Q05793 3707 aaKnown RBP8.98□□□□□ -0.97
Upf1-201ENSMUST00000075666 Csmd3Q80T79 3707 aa8.94□□□□□ -0.98
Upf1-201ENSMUST00000075666 Krtap13-1Q8K198 168 aa8.92□□□□□ -0.98
Upf1-201ENSMUST00000075666 Krtap19-5O08632 62 aa8.92□□□□□ -0.98
Upf1-201ENSMUST00000075666 BsnO88737 3942 aa8.91□□□□□ -0.98
Upf1-201ENSMUST00000075666 Dnah10D3YYQ8 4591 aa8.89□□□□□ -0.99
Upf1-201ENSMUST00000075666 Dnah17Q69Z23 4481 aa8.79□□□□□ -1
Upf1-201ENSMUST00000075666 Huwe1Q7TMY8 4377 aaKnown RBP8.78□□□□□ -1
Upf1-201ENSMUST00000075666 Krtap7-1Q9D3I6 87 aa8.69□□□□□ -1.02
Upf1-201ENSMUST00000075666 Gm10318A0A1W2P728 225 aa8.67□□□□□ -1.02
Upf1-201ENSMUST00000075666 Dnah5Q8VHE6 4621 aa8.65□□□□□ -1.02
Upf1-201ENSMUST00000075666 Dnah7bL7N1Y0 4068 aa8.64□□□□□ -1.03
Upf1-201ENSMUST00000075666 Gm19668J3QMD1 248 aa8.63□□□□□ -1.03
Upf1-201ENSMUST00000075666 Dnah11E9Q7N9 4488 aa8.58□□□□□ -1.04
Upf1-201ENSMUST00000075666 PlecQ9QXS1 4691 aaKnown RBP8.53□□□□□ -1.04
Upf1-201ENSMUST00000075666 Vps13dB1ART2 4390 aa8.49□□□□□ -1.05
Upf1-201ENSMUST00000075666 Dnah9B1AR51 4484 aa8.47□□□□□ -1.05
Upf1-201ENSMUST00000075666 Stard9Q80TF6 4561 aa8.46□□□□□ -1.06
Upf1-201ENSMUST00000075666 Crct1Q6PAI5 102 aa8.44□□□□□ -1.06
Upf1-201ENSMUST00000075666 Sprr2a3Q4KL71 83 aa8.39□□□□□ -1.07
Upf1-201ENSMUST00000075666 Sprr2a1Q9CQK8 83 aa8.39□□□□□ -1.07
Upf1-201ENSMUST00000075666 Lrp1bQ9JI18 4599 aa8.3□□□□□ -1.08
Upf1-201ENSMUST00000075666 Krtap1-5A2A590 122 aa8.3□□□□□ -1.08
Upf1-201ENSMUST00000075666 Gm19402J3QJV4 266 aa8.29□□□□□ -1.08
Upf1-201ENSMUST00000075666 ApobE9Q414 4505 aa8.26□□□□□ -1.09
Upf1-201ENSMUST00000075666 Dnah3Q8BW94 4083 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms