RNA–Protein interactions for RNA: ENSMUST00000072804.10

Sox6-201, Transcript of Transcription factor SOX-6, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Sox6, Length 8,227 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6-201ENSMUST00000072804 KalrnA2CG49 2964 aa3.91□□□□□ -1.78
Sox6-201ENSMUST00000072804 Krtap10-4Q08EG8 221 aa3.9□□□□□ -1.78
Sox6-201ENSMUST00000072804 Rev3lQ61493 3122 aa3.9□□□□□ -1.79
Sox6-201ENSMUST00000072804 Col12a1Q60847 3120 aa3.89□□□□□ -1.79
Sox6-201ENSMUST00000072804 Lama2Q60675 3118 aaKnown RBP3.88□□□□□ -1.79
Sox6-201ENSMUST00000072804 Nf1Q04690 2841 aa3.88□□□□□ -1.79
Sox6-201ENSMUST00000072804 Usp34Q6ZQ93 3582 aa3.87□□□□□ -1.79
Sox6-201ENSMUST00000072804 Krtap10-10A0A1W2P7T6 217 aa3.86□□□□□ -1.79
Sox6-201ENSMUST00000072804 Gm19668J3QMD1 248 aa3.86□□□□□ -1.79
Sox6-201ENSMUST00000072804 Lama1P19137 3084 aa3.85□□□□□ -1.79
Sox6-201ENSMUST00000072804 Krtap13-1Q8K198 168 aa3.84□□□□□ -1.79
Sox6-201ENSMUST00000072804 Mki67E9PVX6 3177 aaKnown RBP3.84□□□□□ -1.8
Sox6-201ENSMUST00000072804 Zfhx3Q61329 3726 aa3.82□□□□□ -1.8
Sox6-201ENSMUST00000072804 Gm7173A0A0G2JEB6 3132 aa3.81□□□□□ -1.8
Sox6-201ENSMUST00000072804 LrbaQ9ESE1 2856 aa3.8□□□□□ -1.8
Sox6-201ENSMUST00000072804 Gm2696A0A1W2P709 240 aa3.77□□□□□ -1.81
Sox6-201ENSMUST00000072804 Vps13aQ5H8C4 3166 aa3.77□□□□□ -1.81
Sox6-201ENSMUST00000072804 Tenm2Q9WTS5 2764 aa3.76□□□□□ -1.81
Sox6-201ENSMUST00000072804 Cdh23Q99PF4 3354 aa3.76□□□□□ -1.81
Sox6-201ENSMUST00000072804 HttP42859 3119 aa3.76□□□□□ -1.81
Sox6-201ENSMUST00000072804 Krtap7-1Q9D3I6 87 aa3.75□□□□□ -1.81
Sox6-201ENSMUST00000072804 Celsr1O35161 3034 aa3.74□□□□□ -1.81
Sox6-201ENSMUST00000072804 Cfap54Q8C6S9 3106 aa3.74□□□□□ -1.81
Sox6-201ENSMUST00000072804 NbeaQ9EPN1 2936 aa3.7□□□□□ -1.82
Sox6-201ENSMUST00000072804 Tenm4Q3UHK6 2771 aa3.7□□□□□ -1.82
Sox6-201ENSMUST00000072804 Wdfy4E9Q2M9 3149 aa3.69□□□□□ -1.82
Sox6-201ENSMUST00000072804 FryE9Q8I9 3020 aa3.68□□□□□ -1.82
Sox6-201ENSMUST00000072804 AtmQ62388 3066 aa3.67□□□□□ -1.82
Sox6-201ENSMUST00000072804 Trank1Q8BV79 2999 aa3.66□□□□□ -1.82
Sox6-201ENSMUST00000072804 AspmQ8CJ27 3122 aa3.65□□□□□ -1.82
Sox6-201ENSMUST00000072804 Unc80Q8BLN6 3261 aa3.65□□□□□ -1.83
Sox6-201ENSMUST00000072804 Adgrg4B7ZCC9 3073 aa3.65□□□□□ -1.83
Sox6-201ENSMUST00000072804 OtogO55225 2910 aa3.63□□□□□ -1.83
Sox6-201ENSMUST00000072804 Celsr3Q91ZI0 3301 aa3.62□□□□□ -1.83
Sox6-201ENSMUST00000072804 Frem2Q6NVD0 3160 aa3.62□□□□□ -1.83
Sox6-201ENSMUST00000072804 Celsr2Q9R0M0 2920 aa3.62□□□□□ -1.83
Sox6-201ENSMUST00000072804 Krtap3-2Q9D638 99 aa3.61□□□□□ -1.83
Sox6-201ENSMUST00000072804 Krtap3-3Q9D7P0 99 aa3.61□□□□□ -1.83
Sox6-201ENSMUST00000072804 Szt2A2A9C3 3431 aa3.6□□□□□ -1.83
Sox6-201ENSMUST00000072804 Krtap3-1A2A591 98 aa3.59□□□□□ -1.83
Sox6-201ENSMUST00000072804 Dmxl2Q8BPN8 3032 aa3.59□□□□□ -1.83
Sox6-201ENSMUST00000072804 Vps13cQ8BX70 3748 aa3.57□□□□□ -1.84
Sox6-201ENSMUST00000072804 Lrrc37aB1AWG4 3215 aa3.57□□□□□ -1.84
Sox6-201ENSMUST00000072804 Gm11939A2A592 99 aa3.53□□□□□ -1.84
Sox6-201ENSMUST00000072804 Col6a3E9PWQ3 3284 aa3.52□□□□□ -1.85
Sox6-201ENSMUST00000072804 SpenQ62504 3644 aaKnown RBP3.52□□□□□ -1.85
Sox6-201ENSMUST00000072804 DmdP11531 3678 aa3.51□□□□□ -1.85
Sox6-201ENSMUST00000072804 Sprr2a3Q4KL71 83 aa3.51□□□□□ -1.85
Sox6-201ENSMUST00000072804 Sprr2a1Q9CQK8 83 aa3.51□□□□□ -1.85
Sox6-201ENSMUST00000072804 SpegQ62407 3262 aa3.5□□□□□ -1.85
Sox6-201ENSMUST00000072804 Brca2P97929 3329 aa3.5□□□□□ -1.85
Sox6-201ENSMUST00000072804 VcanQ62059 3357 aa3.49□□□□□ -1.85
Sox6-201ENSMUST00000072804 Akap9Q70FJ1 3797 aa3.48□□□□□ -1.85
Sox6-201ENSMUST00000072804 Dchs2A0A0A6YW72 3346 aa3.48□□□□□ -1.85
Sox6-201ENSMUST00000072804 Helz2E9QAM5 2947 aaKnown RBP3.46□□□□□ -1.85
Sox6-201ENSMUST00000072804 Gm9736A0A1W2P7N1 277 aa3.45□□□□□ -1.86
Sox6-201ENSMUST00000072804 VwfQ8CIZ8 2813 aa3.45□□□□□ -1.86
Sox6-201ENSMUST00000072804 Myo15aQ9QZZ4 3511 aa3.45□□□□□ -1.86
Sox6-201ENSMUST00000072804 Gm9918Q8BUR5 174 aa3.41□□□□□ -1.86
Sox6-201ENSMUST00000072804 Ank2Q8C8R3 3898 aa3.4□□□□□ -1.87
Sox6-201ENSMUST00000072804 Wdfy3Q6VNB8 3508 aa3.39□□□□□ -1.87
Sox6-201ENSMUST00000072804 Col7a1Q63870 2944 aa3.36□□□□□ -1.87
Sox6-201ENSMUST00000072804 Krtap19-9bQ99NG9 58 aa3.36□□□□□ -1.87
Sox6-201ENSMUST00000072804 2310046K23RikA0A0A6YVW6 87 aa3.35□□□□□ -1.87
Sox6-201ENSMUST00000072804 Cmya5Q70KF4 3739 aa3.34□□□□□ -1.88
Sox6-201ENSMUST00000072804 Dchs1E9PVD3 3291 aa3.33□□□□□ -1.88
Sox6-201ENSMUST00000072804 Gm884A2A9H6 3643 aa3.33□□□□□ -1.88
Sox6-201ENSMUST00000072804 RelnQ60841 3461 aa3.3□□□□□ -1.88
Sox6-201ENSMUST00000072804 Krtap1-5A2A590 122 aa3.3□□□□□ -1.88
Sox6-201ENSMUST00000072804 Muc5acE9QAQ8 3455 aa3.3□□□□□ -1.88
Sox6-201ENSMUST00000072804 Gm18596A0A1W2P860 280 aa3.29□□□□□ -1.88
Sox6-201ENSMUST00000072804 Zfhx4Q9JJN2 3550 aa3.28□□□□□ -1.88
Sox6-201ENSMUST00000072804 Krtap19-5O08632 62 aa3.27□□□□□ -1.89
Sox6-201ENSMUST00000072804 Fbn1Q61554 2873 aaKnown RBP3.27□□□□□ -1.89
Sox6-201ENSMUST00000072804 Smg1Q8BKX6 3658 aaKnown RBP3.26□□□□□ -1.89
Sox6-201ENSMUST00000072804 Gm10318A0A1W2P728 225 aa3.26□□□□□ -1.89
Sox6-201ENSMUST00000072804 Krtap19-9aF8WH65 55 aa3.26□□□□□ -1.89
Sox6-201ENSMUST00000072804 Lama5Q61001 3718 aa3.25□□□□□ -1.89
Sox6-201ENSMUST00000072804 Csmd1Q923L3 3564 aa3.23□□□□□ -1.89
Sox6-201ENSMUST00000072804 Krtap12-1Q9Z287 130 aa3.22□□□□□ -1.89
Sox6-201ENSMUST00000072804 Krtap31-1Q9D644 177 aa3.22□□□□□ -1.89
Sox6-201ENSMUST00000072804 Crct1Q6PAI5 102 aa3.21□□□□□ -1.9
Sox6-201ENSMUST00000072804 Gm19402J3QJV4 266 aa3.17□□□□□ -1.9
Sox6-201ENSMUST00000072804 Gm10272F7CZ33 110 aa3.15□□□□□ -1.91
Sox6-201ENSMUST00000072804 BsnO88737 3942 aa3.15□□□□□ -1.91
Sox6-201ENSMUST00000072804 Csmd2V9GX34 3611 aa3.15□□□□□ -1.91
Sox6-201ENSMUST00000072804 Krtap31-2Q8CAY5 177 aa3.15□□□□□ -1.91
Sox6-201ENSMUST00000072804 Muc6Q80T03 2850 aa3.1□□□□□ -1.91
Sox6-201ENSMUST00000072804 Gm6358A0A087WPH4 74 aa3.09□□□□□ -1.91
Sox6-201ENSMUST00000072804 Mt3P28184 68 aa3.08□□□□□ -1.92
Sox6-201ENSMUST00000072804 Gm10100J3QK64 120 aa3.08□□□□□ -1.92
Sox6-201ENSMUST00000072804 Krtap8-1O08633 61 aa3.08□□□□□ -1.92
Sox6-201ENSMUST00000072804 Sprr2kO70562 68 aa3.06□□□□□ -1.92
Sox6-201ENSMUST00000072804 Krtap1-4Q3V2D6 188 aa3.05□□□□□ -1.92
Sox6-201ENSMUST00000072804 Xirp2Q4U4S6 3784 aa3.04□□□□□ -1.92
Sox6-201ENSMUST00000072804 Gm10142J3KMP7 120 aa3.04□□□□□ -1.92
Sox6-201ENSMUST00000072804 Huwe1Q7TMY8 4377 aaKnown RBP2.99□□□□□ -1.93
Sox6-201ENSMUST00000072804 Svep1A2AVA0 3567 aa2.98□□□□□ -1.93
Sox6-201ENSMUST00000072804 Muc4Q8JZM8 3443 aa2.96□□□□□ -1.94
Sox6-201ENSMUST00000072804 LystP97412 3788 aa2.95□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms