RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Mast4Q811L6 2618 aa7.92□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Igsf10Q3V1M1 2594 aa7.92□□□□□ -1.14
Col4a1-201ENSMUST00000033898 D6Ertd527eA0A0N4SWI3 464 aa7.91□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Rps29P62274 56 aa7.91□□□□□ -1.14
Col4a1-201ENSMUST00000033898 9530053A07RikE9PVG8 2581 aa7.9□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Ubr5Q80TP3 2792 aa7.88□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Nbeal2Q6ZQA0 2742 aa7.87□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Tep1P97499 2629 aa7.87□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Dmxl2Q8BPN8 3032 aa7.86□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Lama5Q61001 3718 aa7.82□□□□□ -1.16
Col4a1-201ENSMUST00000033898 Tnp1P10856 55 aa7.82□□□□□ -1.16
Col4a1-201ENSMUST00000033898 Chd6A3KFM7 2711 aa7.8□□□□□ -1.16
Col4a1-201ENSMUST00000033898 Gm9112A2AI92 75 aa7.75□□□□□ -1.17
Col4a1-201ENSMUST00000033898 NbeaQ9EPN1 2936 aa7.71□□□□□ -1.17
Col4a1-201ENSMUST00000033898 Itpr1P11881 2749 aa7.71□□□□□ -1.17
Col4a1-201ENSMUST00000033898 Utp20Q5XG71 2788 aaKnown RBP7.69□□□□□ -1.18
Col4a1-201ENSMUST00000033898 Cmya5Q70KF4 3739 aa7.69□□□□□ -1.18
Col4a1-201ENSMUST00000033898 SmcpP15265 143 aa7.68□□□□□ -1.18
Col4a1-201ENSMUST00000033898 Stab2Q8R4U0 2559 aa7.65□□□□□ -1.19
Col4a1-201ENSMUST00000033898 Pkd1l1Q8R526 2615 aa7.61□□□□□ -1.19
Col4a1-201ENSMUST00000033898 Muc5acE9QAQ8 3455 aa7.6□□□□□ -1.19
Col4a1-201ENSMUST00000033898 Gm9918Q8BUR5 174 aa7.58□□□□□ -1.2
Col4a1-201ENSMUST00000033898 Svep1A2AVA0 3567 aa7.55□□□□□ -1.2
Col4a1-201ENSMUST00000033898 Gm20537G3UYK7 97 aa7.54□□□□□ -1.2
Col4a1-201ENSMUST00000033898 A930033H14RikG5E8X6 103 aa7.51□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Csmd2V9GX34 3611 aa7.49□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Trank1Q8BV79 2999 aa7.48□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Gm40193A0A1B0GT39 78 aa7.48□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Itpr2Q9Z329 2701 aa7.47□□□□□ -1.21
Col4a1-201ENSMUST00000033898 ApcQ61315 2845 aa7.46□□□□□ -1.22
Col4a1-201ENSMUST00000033898 B930094E09RikQ8C4T2 136 aa7.45□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Muc2Q80Z19 2680 aa7.45□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Igfn1Q3KNY0 2849 aa7.45□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Gm9736A0A1W2P7N1 277 aa7.44□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Zzef1Q5SSH7 2924 aa7.44□□□□□ -1.22
Col4a1-201ENSMUST00000033898 FcgbpE9Q0B5 2583 aa7.43□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Srrm2Q8BTI8 2703 aaKnown RBP7.43□□□□□ -1.22
Col4a1-201ENSMUST00000033898 DspE9Q557 2883 aaKnown RBP7.42□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Col6a5A6H584 2640 aa7.42□□□□□ -1.22
Col4a1-201ENSMUST00000033898 TgO08710 2766 aa7.37□□□□□ -1.23
Col4a1-201ENSMUST00000033898 Prm2P07978 107 aa7.36□□□□□ -1.23
Col4a1-201ENSMUST00000033898 Gm10318A0A1W2P728 225 aa7.35□□□□□ -1.23
Col4a1-201ENSMUST00000033898 Hivep1Q03172 2688 aa7.33□□□□□ -1.24
Col4a1-201ENSMUST00000033898 Tex15F8VPN2 2785 aa7.32□□□□□ -1.24
Col4a1-201ENSMUST00000033898 Tenm4Q3UHK6 2771 aa7.24□□□□□ -1.25
Col4a1-201ENSMUST00000033898 LrbaQ9ESE1 2856 aa7.19□□□□□ -1.26
Col4a1-201ENSMUST00000033898 Muc4Q8JZM8 3443 aa7.18□□□□□ -1.26
Col4a1-201ENSMUST00000033898 Celsr2Q9R0M0 2920 aa7.16□□□□□ -1.26
Col4a1-201ENSMUST00000033898 2310079G19RikQ9D6L6 185 aa7.14□□□□□ -1.27
Col4a1-201ENSMUST00000033898 OtogO55225 2910 aa7.09□□□□□ -1.27
Col4a1-201ENSMUST00000033898 Chd9Q8BYH8 2885 aa7.09□□□□□ -1.28
Col4a1-201ENSMUST00000033898 Ank2Q8C8R3 3898 aa7.08□□□□□ -1.28
Col4a1-201ENSMUST00000033898 Crct1Q6PAI5 102 aa7.07□□□□□ -1.28
Col4a1-201ENSMUST00000033898 4933428G20RikQ9D3X4 101 aa7.02□□□□□ -1.29
Col4a1-201ENSMUST00000033898 Pdzd2E9Q1M1 2796 aa7□□□□□ -1.29
Col4a1-201ENSMUST00000033898 Gm17416Q30KP4 66 aa7□□□□□ -1.29
Col4a1-201ENSMUST00000033898 LystP97412 3788 aa6.99□□□□□ -1.29
Col4a1-201ENSMUST00000033898 BsnO88737 3942 aa6.98□□□□□ -1.29
Col4a1-201ENSMUST00000033898 Tenm3Q9WTS6 2715 aa6.95□□□□□ -1.3
Col4a1-201ENSMUST00000033898 2210017I01RikA0A0A6YVV1 95 aa6.95□□□□□ -1.3
Col4a1-201ENSMUST00000033898 FlncQ8VHX6 2726 aaKnown RBP6.95□□□□□ -1.3
Col4a1-201ENSMUST00000033898 CubnQ9JLB4 3623 aa6.93□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Gm19668J3QMD1 248 aa6.92□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Tenm1Q9WTS4 2731 aa6.9□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Nf1Q04690 2841 aa6.9□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Tenm2Q9WTS5 2764 aa6.9□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Gm17402F6Z0L5 76 aa6.82□□□□□ -1.32
Col4a1-201ENSMUST00000033898 Hspg2Q05793 3707 aaKnown RBP6.79□□□□□ -1.32
Col4a1-201ENSMUST00000033898 Krtap13-1Q8K198 168 aa6.74□□□□□ -1.33
Col4a1-201ENSMUST00000033898 Huwe1Q7TMY8 4377 aaKnown RBP6.71□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Xirp2Q4U4S6 3784 aa6.7□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Gm6358A0A087WPH4 74 aa6.69□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Krtap19-5O08632 62 aa6.69□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Fbn1Q61554 2873 aaKnown RBP6.68□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Helz2E9QAM5 2947 aaKnown RBP6.65□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Megf8P60882 2789 aa6.63□□□□□ -1.35
Col4a1-201ENSMUST00000033898 Gm11939A2A592 99 aa6.61□□□□□ -1.35
Col4a1-201ENSMUST00000033898 Csmd3Q80T79 3707 aa6.59□□□□□ -1.35
Col4a1-201ENSMUST00000033898 Dnah14A0A140LIJ4 4489 aa6.54□□□□□ -1.36
Col4a1-201ENSMUST00000033898 Col7a1Q63870 2944 aa6.53□□□□□ -1.36
Col4a1-201ENSMUST00000033898 VwfQ8CIZ8 2813 aa6.51□□□□□ -1.37
Col4a1-201ENSMUST00000033898 Krtap3-1A2A591 98 aa6.45□□□□□ -1.38
Col4a1-201ENSMUST00000033898 Sprr2kO70562 68 aa6.33□□□□□ -1.4
Col4a1-201ENSMUST00000033898 Krtap8-1O08633 61 aa6.25□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Krtap3-2Q9D638 99 aa6.25□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Krtap3-3Q9D7P0 99 aa6.25□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Krtap7-1Q9D3I6 87 aa6.24□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Gm18596A0A1W2P860 280 aa6.2□□□□□ -1.42
Col4a1-201ENSMUST00000033898 Dnah6E9Q0B6 4144 aa6.18□□□□□ -1.42
Col4a1-201ENSMUST00000033898 Dnah10D3YYQ8 4591 aa6.16□□□□□ -1.42
Col4a1-201ENSMUST00000033898 Dnah7bL7N1Y0 4068 aa6.14□□□□□ -1.43
Col4a1-201ENSMUST00000033898 LorP18165 486 aa6.13□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Kmt2aP55200 3966 aa6.13□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Muc6Q80T03 2850 aa6.12□□□□□ -1.43
Col4a1-201ENSMUST00000033898 PrkdcP97313 4128 aa6.12□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Krtap19-9aF8WH65 55 aa6.1□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Dnah11E9Q7N9 4488 aa6.05□□□□□ -1.44
Col4a1-201ENSMUST00000033898 Gm19402J3QJV4 266 aa5.99□□□□□ -1.45
Col4a1-201ENSMUST00000033898 Krtap1-5A2A590 122 aa5.99□□□□□ -1.45
Col4a1-201ENSMUST00000033898 Sprr2a3Q4KL71 83 aa5.96□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 77.1 ms