RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Helz2E9QAM5 2947 aaKnown RBP10.71□□□□□ -0.7
Ebf3-201ENSMUST00000033378 Rpl37Q9D823 97 aa10.69□□□□□ -0.7
Ebf3-201ENSMUST00000033378 LrbaQ9ESE1 2856 aa10.69□□□□□ -0.7
Ebf3-201ENSMUST00000033378 Spink7Q6IE32 76 aa10.69□□□□□ -0.7
Ebf3-201ENSMUST00000033378 Gm9507D3Z5T3 223 aa10.68□□□□□ -0.7
Ebf3-201ENSMUST00000033378 Krtap14O08640 167 aa10.68□□□□□ -0.7
Ebf3-201ENSMUST00000033378 Tenm3Q9WTS6 2715 aa10.65□□□□□ -0.7
Ebf3-201ENSMUST00000033378 Romo1P60603 79 aa10.64□□□□□ -0.71
Ebf3-201ENSMUST00000033378 Myo15aQ9QZZ4 3511 aa10.58□□□□□ -0.72
Ebf3-201ENSMUST00000033378 DmdP11531 3678 aa10.58□□□□□ -0.72
Ebf3-201ENSMUST00000033378 Gm20538F6Z9R1 75 aa10.56□□□□□ -0.72
Ebf3-201ENSMUST00000033378 Krtap10-4Q08EG8 221 aa10.56□□□□□ -0.72
Ebf3-201ENSMUST00000033378 Gm5767A0A0J9YTU8 78 aa10.55□□□□□ -0.72
Ebf3-201ENSMUST00000033378 Gm10382Q3V0T5 144 aa10.55□□□□□ -0.72
Ebf3-201ENSMUST00000033378 Tnp2P11378 117 aa10.49□□□□□ -0.73
Ebf3-201ENSMUST00000033378 Cox6b2Q80ZN9 88 aa10.42□□□□□ -0.74
Ebf3-201ENSMUST00000033378 Zfhx3Q61329 3726 aa10.41□□□□□ -0.74
Ebf3-201ENSMUST00000033378 D6Ertd527eA0A0N4SWI3 464 aa10.38□□□□□ -0.75
Ebf3-201ENSMUST00000033378 Krtap10-10A0A1W2P7T6 217 aa10.37□□□□□ -0.75
Ebf3-201ENSMUST00000033378 Tenm4Q3UHK6 2771 aa10.36□□□□□ -0.75
Ebf3-201ENSMUST00000033378 BC029722A0A0N4SW31 51 aa10.35□□□□□ -0.75
Ebf3-201ENSMUST00000033378 Camk2n1Q6QWF9 78 aa10.35□□□□□ -0.75
Ebf3-201ENSMUST00000033378 Akap9Q70FJ1 3797 aa10.33□□□□□ -0.76
Ebf3-201ENSMUST00000033378 Fam229aB2KGE5 128 aa10.27□□□□□ -0.77
Ebf3-201ENSMUST00000033378 Muc5acE9QAQ8 3455 aa10.26□□□□□ -0.77
Ebf3-201ENSMUST00000033378 Rps29P62274 56 aa10.26□□□□□ -0.77
Ebf3-201ENSMUST00000033378 Gm19426M0QWC7 77 aa10.25□□□□□ -0.77
Ebf3-201ENSMUST00000033378 Csmd1Q923L3 3564 aa10.24□□□□□ -0.77
Ebf3-201ENSMUST00000033378 Vps13cQ8BX70 3748 aa10.22□□□□□ -0.77
Ebf3-201ENSMUST00000033378 Sec61bQ9CQS8 96 aaKnown RBP10.21□□□□□ -0.78
Ebf3-201ENSMUST00000033378 Tenm1Q9WTS4 2731 aa10.13□□□□□ -0.79
Ebf3-201ENSMUST00000033378 SpenQ62504 3644 aaKnown RBP10.13□□□□□ -0.79
Ebf3-201ENSMUST00000033378 Gm2696A0A1W2P709 240 aa10.1□□□□□ -0.79
Ebf3-201ENSMUST00000033378 Smg1Q8BKX6 3658 aaKnown RBP10.03□□□□□ -0.8
Ebf3-201ENSMUST00000033378 OtogO55225 2910 aa10.02□□□□□ -0.81
Ebf3-201ENSMUST00000033378 Ndufaf8A2AMZ4 74 aa10□□□□□ -0.81
Ebf3-201ENSMUST00000033378 Gm20537G3UYK7 97 aa9.96□□□□□ -0.81
Ebf3-201ENSMUST00000033378 Zfhx4Q9JJN2 3550 aa9.89□□□□□ -0.83
Ebf3-201ENSMUST00000033378 2310079G19RikQ9D6L6 185 aa9.85□□□□□ -0.83
Ebf3-201ENSMUST00000033378 Gm5965D3Z724 196 aa9.82□□□□□ -0.84
Ebf3-201ENSMUST00000033378 A930033H14RikG5E8X6 103 aa9.8□□□□□ -0.84
Ebf3-201ENSMUST00000033378 Tenm2Q9WTS5 2764 aa9.78□□□□□ -0.84
Ebf3-201ENSMUST00000033378 Gm884A2A9H6 3643 aa9.78□□□□□ -0.84
Ebf3-201ENSMUST00000033378 Lama5Q61001 3718 aa9.77□□□□□ -0.84
Ebf3-201ENSMUST00000033378 VwfQ8CIZ8 2813 aa9.7□□□□□ -0.86
Ebf3-201ENSMUST00000033378 Megf8P60882 2789 aa9.67□□□□□ -0.86
Ebf3-201ENSMUST00000033378 Gm21887J3QQ04 176 aa9.67□□□□□ -0.86
Ebf3-201ENSMUST00000033378 Gm9112A2AI92 75 aa9.58□□□□□ -0.88
Ebf3-201ENSMUST00000033378 Gm40193A0A1B0GT39 78 aa9.55□□□□□ -0.88
Ebf3-201ENSMUST00000033378 Fbn1Q61554 2873 aaKnown RBP9.52□□□□□ -0.88
Ebf3-201ENSMUST00000033378 2310057N15RikQ9D6T8 200 aa9.52□□□□□ -0.89
Ebf3-201ENSMUST00000033378 B930094E09RikQ8C4T2 136 aa9.51□□□□□ -0.89
Ebf3-201ENSMUST00000033378 Muc4Q8JZM8 3443 aa9.5□□□□□ -0.89
Ebf3-201ENSMUST00000033378 Svep1A2AVA0 3567 aa9.46□□□□□ -0.9
Ebf3-201ENSMUST00000033378 Cmya5Q70KF4 3739 aa9.43□□□□□ -0.9
Ebf3-201ENSMUST00000033378 Tnp1P10856 55 aa9.37□□□□□ -0.91
Ebf3-201ENSMUST00000033378 Col7a1Q63870 2944 aa9.36□□□□□ -0.91
Ebf3-201ENSMUST00000033378 Gm17416Q30KP4 66 aa9.34□□□□□ -0.91
Ebf3-201ENSMUST00000033378 Gm9736A0A1W2P7N1 277 aa9.27□□□□□ -0.93
Ebf3-201ENSMUST00000033378 2210017I01RikA0A0A6YVV1 95 aa9.21□□□□□ -0.93
Ebf3-201ENSMUST00000033378 Gm11939A2A592 99 aa9.19□□□□□ -0.94
Ebf3-201ENSMUST00000033378 Prm2P07978 107 aa9.15□□□□□ -0.95
Ebf3-201ENSMUST00000033378 Krtap3-2Q9D638 99 aa9.1□□□□□ -0.95
Ebf3-201ENSMUST00000033378 Krtap3-3Q9D7P0 99 aa9.1□□□□□ -0.95
Ebf3-201ENSMUST00000033378 Muc6Q80T03 2850 aa9.08□□□□□ -0.96
Ebf3-201ENSMUST00000033378 Gm9918Q8BUR5 174 aa9.03□□□□□ -0.96
Ebf3-201ENSMUST00000033378 Csmd2V9GX34 3611 aa9.01□□□□□ -0.97
Ebf3-201ENSMUST00000033378 Gm17402F6Z0L5 76 aa9.01□□□□□ -0.97
Ebf3-201ENSMUST00000033378 LystP97412 3788 aa8.86□□□□□ -0.99
Ebf3-201ENSMUST00000033378 Ank2Q8C8R3 3898 aa8.86□□□□□ -0.99
Ebf3-201ENSMUST00000033378 CubnQ9JLB4 3623 aa8.79□□□□□ -1
Ebf3-201ENSMUST00000033378 Krtap19-5O08632 62 aa8.78□□□□□ -1
Ebf3-201ENSMUST00000033378 Krtap3-1A2A591 98 aa8.78□□□□□ -1
Ebf3-201ENSMUST00000033378 Krtap13-1Q8K198 168 aa8.76□□□□□ -1.01
Ebf3-201ENSMUST00000033378 Gm10318A0A1W2P728 225 aa8.72□□□□□ -1.01
Ebf3-201ENSMUST00000033378 Gm19668J3QMD1 248 aa8.6□□□□□ -1.03
Ebf3-201ENSMUST00000033378 Dnah14A0A140LIJ4 4489 aa8.53□□□□□ -1.04
Ebf3-201ENSMUST00000033378 Crct1Q6PAI5 102 aa8.5□□□□□ -1.05
Ebf3-201ENSMUST00000033378 Dnah10D3YYQ8 4591 aa8.37□□□□□ -1.07
Ebf3-201ENSMUST00000033378 Csmd3Q80T79 3707 aa8.34□□□□□ -1.07
Ebf3-201ENSMUST00000033378 Xirp2Q4U4S6 3784 aa8.32□□□□□ -1.08
Ebf3-201ENSMUST00000033378 Huwe1Q7TMY8 4377 aaKnown RBP8.23□□□□□ -1.09
Ebf3-201ENSMUST00000033378 BsnO88737 3942 aa8.23□□□□□ -1.09
Ebf3-201ENSMUST00000033378 Hspg2Q05793 3707 aaKnown RBP8.22□□□□□ -1.09
Ebf3-201ENSMUST00000033378 Krtap7-1Q9D3I6 87 aa8.22□□□□□ -1.09
Ebf3-201ENSMUST00000033378 Dnah5Q8VHE6 4621 aa8.21□□□□□ -1.09
Ebf3-201ENSMUST00000033378 4933428G20RikQ9D3X4 101 aa8.16□□□□□ -1.1
Ebf3-201ENSMUST00000033378 Sprr2a3Q4KL71 83 aa8.1□□□□□ -1.11
Ebf3-201ENSMUST00000033378 Sprr2a1Q9CQK8 83 aa8.1□□□□□ -1.11
Ebf3-201ENSMUST00000033378 Stard9Q80TF6 4561 aa8.07□□□□□ -1.12
Ebf3-201ENSMUST00000033378 Krtap1-5A2A590 122 aa8.06□□□□□ -1.12
Ebf3-201ENSMUST00000033378 Dnah17Q69Z23 4481 aa8.03□□□□□ -1.12
Ebf3-201ENSMUST00000033378 Vps13dB1ART2 4390 aa8.01□□□□□ -1.13
Ebf3-201ENSMUST00000033378 PlecQ9QXS1 4691 aaKnown RBP7.98□□□□□ -1.13
Ebf3-201ENSMUST00000033378 Gm19402J3QJV4 266 aa7.92□□□□□ -1.14
Ebf3-201ENSMUST00000033378 Dnah11E9Q7N9 4488 aa7.88□□□□□ -1.15
Ebf3-201ENSMUST00000033378 Dnah7bL7N1Y0 4068 aa7.82□□□□□ -1.16
Ebf3-201ENSMUST00000033378 Krtap1-4Q3V2D6 188 aa7.78□□□□□ -1.16
Ebf3-201ENSMUST00000033378 Dnah9B1AR51 4484 aa7.78□□□□□ -1.16
Ebf3-201ENSMUST00000033378 Krtap19-9aF8WH65 55 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 253.8 ms