RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Notch1Q01705 2531 aa8.7□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Igkv3-12A0A140T8P0 119 aa8.7□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Defa28D3Z1V9 94 aa8.7□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Itpr2Q9Z329 2701 aa8.7□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Gm7138L7N2C3 230 aa8.69□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Gm3238W4VSP7 230 aa8.69□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Cdc42se1Q8BHL7 80 aa8.69□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Spint4Q9D263 159 aa8.69□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Ube2bP63147 152 aa8.68□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Dnah3Q8BW94 4083 aa8.67□□□□□ -1.02
Clcn4-203ENSMUST00000210061 1700018G05RikA0A1B0GSI2 66 aa8.66□□□□□ -1.02
Clcn4-203ENSMUST00000210061 9230102O04RikA2ASX7 82 aa8.66□□□□□ -1.02
Clcn4-203ENSMUST00000210061 U90926O08546 118 aa8.65□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Defb12Q8K4N3 78 aa8.65□□□□□ -1.02
Clcn4-203ENSMUST00000210061 Gm21886J3QJU9 214 aa8.64□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Fam104aA2A6P4 185 aa8.62□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Gm21887J3QQ04 176 aa8.62□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Col6a5A6H584 2640 aa8.62□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Atox1O08997 68 aaKnown RBP8.61□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Stab1Q8R4Y4 2571 aa8.61□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Coa5Q99M07 74 aa8.61□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Igkv3-10A0A0G2JGN0 119 aa8.6□□□□□ -1.03
Clcn4-203ENSMUST00000210061 AI606181Q8C7B9 129 aa8.6□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Srrm2Q8BTI8 2703 aaKnown RBP8.6□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Bean1Q9EQG5 255 aa8.6□□□□□ -1.03
Clcn4-203ENSMUST00000210061 Reg3aO09037 175 aa8.59□□□□□ -1.03
Clcn4-203ENSMUST00000210061 FlnbQ80X90 2602 aaKnown RBP8.58□□□□□ -1.04
Clcn4-203ENSMUST00000210061 A0A286YE49 62 aa8.57□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Sslp1Q3UN54 99 aa8.57□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Sox16Q62247 57 aa8.57□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Odf3bQ5M8M2 238 aa8.56□□□□□ -1.04
Clcn4-203ENSMUST00000210061 B9d2Q3UK10 175 aa8.56□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Wfdc13Q5DQQ6 81 aa8.56□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Dnah7bL7N1Y0 4068 aa8.56□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Sec61gP60060 68 aa8.55□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Gm28230A0A0A0MQ91 144 aa8.54□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Hivep1Q03172 2688 aa8.54□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Chchd10Q7TNL9 138 aa8.53□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Zcchc13Q9D548 170 aa8.53□□□□□ -1.04
Clcn4-203ENSMUST00000210061 Gm10139O88245 57 aa8.53□□□□□ -1.04
Clcn4-203ENSMUST00000210061 1700074P13RikQ9D9G7 251 aa8.52□□□□□ -1.05
Clcn4-203ENSMUST00000210061 TgO08710 2766 aa8.52□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Nsd1O88491 2588 aaKnown RBP8.52□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Dnah1E9Q8T7 4250 aa8.51□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Rpl37aP61514 92 aa8.5□□□□□ -1.05
Clcn4-203ENSMUST00000210061 SycnQ8VCK7 134 aa8.5□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Gm36176A0A1W2P8D5 158 aa8.49□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Ube2aQ9Z255 152 aa8.49□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Gm7137J3QMW1 236 aa8.48□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Dnah10D3YYQ8 4591 aa8.46□□□□□ -1.05
Clcn4-203ENSMUST00000210061 Igkv3-7A0A0G2JE31 119 aa8.45□□□□□ -1.06
Clcn4-203ENSMUST00000210061 HrnrQ8VHD8 2496 aa8.45□□□□□ -1.06
Clcn4-203ENSMUST00000210061 VwfQ8CIZ8 2813 aa8.45□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Dnah17Q69Z23 4481 aa8.44□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Wfdc10Q3V2J9 124 aa8.44□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Dnah14A0A140LIJ4 4489 aa8.43□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Csmd3Q80T79 3707 aa8.43□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Gm2310J3QNJ2 377 aa8.43□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Phxr4P15974 95 aa8.42□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Phf5aP83870 110 aaKnown RBP8.42□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Fn1P11276 2477 aaKnown RBP8.42□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Chtf8P0CG14 533 aa8.41□□□□□ -1.06
Clcn4-203ENSMUST00000210061 Gm10837Q3UTT8 145 aa8.41□□□□□ -1.06
Clcn4-203ENSMUST00000210061 2310061N02RikQ9D6S9 174 aa8.41□□□□□ -1.06
Clcn4-203ENSMUST00000210061 4933415A04RikQ9D443 101 aa8.4□□□□□ -1.07
Clcn4-203ENSMUST00000210061 Gm28374F6SG70 93 aa8.39□□□□□ -1.07
Clcn4-203ENSMUST00000210061 Dnah6E9Q0B6 4144 aa8.37□□□□□ -1.07
Clcn4-203ENSMUST00000210061 AW011738F6S7Q2 159 aa8.36□□□□□ -1.07
Clcn4-203ENSMUST00000210061 Gm10267M0QWD8 85 aa8.36□□□□□ -1.07
Clcn4-203ENSMUST00000210061 Wfdc17Q5SSJ1 76 aa8.35□□□□□ -1.07
Clcn4-203ENSMUST00000210061 Igkv3-5A0A140T8M6 119 aa8.34□□□□□ -1.07
Clcn4-203ENSMUST00000210061 Defb9Q8R2I6 67 aa8.32□□□□□ -1.08
Clcn4-203ENSMUST00000210061 Gm27235Q3UW50 83 aa8.31□□□□□ -1.08
Clcn4-203ENSMUST00000210061 6030445D17RikE9Q8F9 148 aa8.3□□□□□ -1.08
Clcn4-203ENSMUST00000210061 Gm10160F6Y577 67 aa8.3□□□□□ -1.08
Clcn4-203ENSMUST00000210061 Q8K1L6 76 aa8.3□□□□□ -1.08
Clcn4-203ENSMUST00000210061 Dnah11E9Q7N9 4488 aa8.29□□□□□ -1.08
Clcn4-203ENSMUST00000210061 9530053A07RikE9PVG8 2581 aa8.29□□□□□ -1.08
Clcn4-203ENSMUST00000210061 Gm9508A0A1W2P7W0 230 aa8.28□□□□□ -1.08
Clcn4-203ENSMUST00000210061 1700012A03RikQ9DAF1 130 aa8.28□□□□□ -1.08
Clcn4-203ENSMUST00000210061 Megf8P60882 2789 aa8.25□□□□□ -1.09
Clcn4-203ENSMUST00000210061 FasnP19096 2504 aaKnown RBP8.25□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Nupr2Q497P3 102 aa8.25□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Tenm2Q9WTS5 2764 aa8.24□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Gm10642Q3TWM1 71 aa8.24□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Igkv3-3A0A140T8Q0 119 aa8.23□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Defb38Q7TNV7 63 aa8.23□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Muc6Q80T03 2850 aa8.22□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Stab2Q8R4U0 2559 aa8.22□□□□□ -1.09
Clcn4-203ENSMUST00000210061 Dnah9B1AR51 4484 aa8.21□□□□□ -1.1
Clcn4-203ENSMUST00000210061 Gm10065F6TJM2 114 aa8.19□□□□□ -1.1
Clcn4-203ENSMUST00000210061 Gm20661K7N787 53 aa8.19□□□□□ -1.1
Clcn4-203ENSMUST00000210061 Dync2h1Q45VK7 4306 aa8.18□□□□□ -1.1
Clcn4-203ENSMUST00000210061 Spata3Q9D9T6 193 aa8.16□□□□□ -1.1
Clcn4-203ENSMUST00000210061 Plac8Q9JI48 112 aa8.15□□□□□ -1.1
Clcn4-203ENSMUST00000210061 SptssbQ925E8 76 aa8.14□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Gm11939A2A592 99 aa8.14□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Krtap29-1A2A5X4 342 aa8.14□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Cypt14J3QPF7 87 aa8.13□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Defb10Q8R2I8 73 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms