RNA–Protein interactions for RNA: ENSMUST00000113055.8

Shroom3-203, Transcript of Protein Shroom3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom3, Length 6,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-203ENSMUST00000113055 Myo18bE9PV66 2605 aa9□□□□□ -0.97
Shroom3-203ENSMUST00000113055 Gm36176A0A1W2P8D5 158 aa9□□□□□ -0.97
Shroom3-203ENSMUST00000113055 Gm16253D3Z167 63 aa8.98□□□□□ -0.97
Shroom3-203ENSMUST00000113055 Sprr1aQ62266 144 aa8.97□□□□□ -0.97
Shroom3-203ENSMUST00000113055 Gm5767A0A0J9YTU8 78 aa8.96□□□□□ -0.97
Shroom3-203ENSMUST00000113055 Fn1P11276 2477 aaKnown RBP8.96□□□□□ -0.97
Shroom3-203ENSMUST00000113055 BC029722A0A0N4SW31 51 aa8.96□□□□□ -0.98
Shroom3-203ENSMUST00000113055 Prune2Q52KR3 3084 aa8.95□□□□□ -0.98
Shroom3-203ENSMUST00000113055 Gm10382Q3V0T5 144 aa8.95□□□□□ -0.98
Shroom3-203ENSMUST00000113055 Bod1lE9Q6J5 3032 aa8.94□□□□□ -0.98
Shroom3-203ENSMUST00000113055 AtrQ9JKK8 2635 aa8.92□□□□□ -0.98
Shroom3-203ENSMUST00000113055 Zfp292Q9Z2U2 2698 aa8.91□□□□□ -0.98
Shroom3-203ENSMUST00000113055 Cep350E9Q309 3095 aa8.88□□□□□ -0.99
Shroom3-203ENSMUST00000113055 TrioQ0KL02 3102 aa8.85□□□□□ -0.99
Shroom3-203ENSMUST00000113055 A730071L15RikQ8C4X0 137 aa8.85□□□□□ -0.99
Shroom3-203ENSMUST00000113055 Krtap13O88375 197 aa8.84□□□□□ -0.99
Shroom3-203ENSMUST00000113055 Krtap29-1A2A5X4 342 aa8.83□□□□□ -1
Shroom3-203ENSMUST00000113055 FlnbQ80X90 2602 aaKnown RBP8.81□□□□□ -1
Shroom3-203ENSMUST00000113055 2310050C09RikG5E8Z3 280 aa8.8□□□□□ -1
Shroom3-203ENSMUST00000113055 CenpfE9Q3P4 2997 aaKnown RBP8.8□□□□□ -1
Shroom3-203ENSMUST00000113055 Gm9507D3Z5T3 223 aa8.77□□□□□ -1.01
Shroom3-203ENSMUST00000113055 Usp34Q6ZQ93 3582 aa8.76□□□□□ -1.01
Shroom3-203ENSMUST00000113055 FlnaQ8BTM8 2647 aaKnown RBP8.75□□□□□ -1.01
Shroom3-203ENSMUST00000113055 Gm11565A2A4M7 156 aa8.71□□□□□ -1.02
Shroom3-203ENSMUST00000113055 PcntP48725 2898 aa8.69□□□□□ -1.02
Shroom3-203ENSMUST00000113055 Krtap10-4Q08EG8 221 aa8.69□□□□□ -1.02
Shroom3-203ENSMUST00000113055 Gm9195A0A140LHT4 2805 aa8.68□□□□□ -1.02
Shroom3-203ENSMUST00000113055 Gcn1E9PVA8 2671 aaKnown RBP8.67□□□□□ -1.02
Shroom3-203ENSMUST00000113055 Col12a1Q60847 3120 aa8.65□□□□□ -1.02
Shroom3-203ENSMUST00000113055 1700042G07RikB1AUF7 90 aa8.63□□□□□ -1.03
Shroom3-203ENSMUST00000113055 4933415A04RikQ9D443 101 aa8.62□□□□□ -1.03
Shroom3-203ENSMUST00000113055 Ndufaf8A2AMZ4 74 aa8.61□□□□□ -1.03
Shroom3-203ENSMUST00000113055 Krtap10-10A0A1W2P7T6 217 aa8.59□□□□□ -1.03
Shroom3-203ENSMUST00000113055 Kmt2bO08550 2713 aa8.59□□□□□ -1.03
Shroom3-203ENSMUST00000113055 Notch1Q01705 2531 aa8.59□□□□□ -1.04
Shroom3-203ENSMUST00000113055 Ranbp2Q9ERU9 3053 aaKnown RBP8.58□□□□□ -1.04
Shroom3-203ENSMUST00000113055 Akap13E9Q394 2776 aa8.58□□□□□ -1.04
Shroom3-203ENSMUST00000113055 Krtap14O08640 167 aa8.55□□□□□ -1.04
Shroom3-203ENSMUST00000113055 Mki67E9PVX6 3177 aaKnown RBP8.53□□□□□ -1.04
Shroom3-203ENSMUST00000113055 Cox6b2Q80ZN9 88 aa8.52□□□□□ -1.05
Shroom3-203ENSMUST00000113055 HttP42859 3119 aa8.5□□□□□ -1.05
Shroom3-203ENSMUST00000113055 Stab1Q8R4Y4 2571 aa8.49□□□□□ -1.05
Shroom3-203ENSMUST00000113055 Cdh23Q99PF4 3354 aa8.49□□□□□ -1.05
Shroom3-203ENSMUST00000113055 Gm21887J3QQ04 176 aa8.49□□□□□ -1.05
Shroom3-203ENSMUST00000113055 Gm2310J3QNJ2 377 aa8.46□□□□□ -1.06
Shroom3-203ENSMUST00000113055 Rev3lQ61493 3122 aa8.44□□□□□ -1.06
Shroom3-203ENSMUST00000113055 Prrc2cQ3TLH4 2846 aaKnown RBP8.43□□□□□ -1.06
Shroom3-203ENSMUST00000113055 Gm7173A0A0G2JEB6 3132 aa8.42□□□□□ -1.06
Shroom3-203ENSMUST00000113055 Hectd1Q69ZR2 2618 aaKnown RBP8.41□□□□□ -1.06
Shroom3-203ENSMUST00000113055 Lama2Q60675 3118 aaKnown RBP8.4□□□□□ -1.06
Shroom3-203ENSMUST00000113055 Gm9112A2AI92 75 aa8.39□□□□□ -1.07
Shroom3-203ENSMUST00000113055 Rps29P62274 56 aa8.38□□□□□ -1.07
Shroom3-203ENSMUST00000113055 Map1aQ9QYR6 2776 aa8.38□□□□□ -1.07
Shroom3-203ENSMUST00000113055 Tnp2P11378 117 aa8.37□□□□□ -1.07
Shroom3-203ENSMUST00000113055 Zfhx3Q61329 3726 aa8.36□□□□□ -1.07
Shroom3-203ENSMUST00000113055 Celsr3Q91ZI0 3301 aa8.35□□□□□ -1.07
Shroom3-203ENSMUST00000113055 BptfA2A654 3036 aaKnown RBP8.35□□□□□ -1.07
Shroom3-203ENSMUST00000113055 2310061N02RikQ9D6S9 174 aa8.33□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Mast4Q811L6 2618 aa8.32□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Gm2696A0A1W2P709 240 aa8.31□□□□□ -1.08
Shroom3-203ENSMUST00000113055 2310057N15RikQ9D6T8 200 aa8.31□□□□□ -1.08
Shroom3-203ENSMUST00000113055 D6Ertd527eA0A0N4SWI3 464 aa8.3□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Tnp1P10856 55 aa8.3□□□□□ -1.08
Shroom3-203ENSMUST00000113055 9530053A07RikE9PVG8 2581 aa8.29□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Ash1lQ99MY8 2958 aa8.29□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Igsf10Q3V1M1 2594 aa8.28□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Dmxl1Q6PNC0 3013 aa8.27□□□□□ -1.08
Shroom3-203ENSMUST00000113055 Cfap54Q8C6S9 3106 aa8.24□□□□□ -1.09
Shroom3-203ENSMUST00000113055 MgaA2AWL7 3003 aaKnown RBP8.24□□□□□ -1.09
Shroom3-203ENSMUST00000113055 AtmQ62388 3066 aa8.23□□□□□ -1.09
Shroom3-203ENSMUST00000113055 Tep1P97499 2629 aa8.23□□□□□ -1.09
Shroom3-203ENSMUST00000113055 Itpr3P70227 2670 aa8.23□□□□□ -1.09
Shroom3-203ENSMUST00000113055 Unc80Q8BLN6 3261 aa8.22□□□□□ -1.09
Shroom3-203ENSMUST00000113055 Szt2A2A9C3 3431 aa8.21□□□□□ -1.09
Shroom3-203ENSMUST00000113055 Gm5965D3Z724 196 aa8.21□□□□□ -1.1
Shroom3-203ENSMUST00000113055 Vps13aQ5H8C4 3166 aa8.19□□□□□ -1.1
Shroom3-203ENSMUST00000113055 NipblQ6KCD5 2798 aaKnown RBP8.18□□□□□ -1.1
Shroom3-203ENSMUST00000113055 Ubr5Q80TP3 2792 aa8.15□□□□□ -1.11
Shroom3-203ENSMUST00000113055 Nbeal2Q6ZQA0 2742 aa8.12□□□□□ -1.11
Shroom3-203ENSMUST00000113055 Frem2Q6NVD0 3160 aa8.1□□□□□ -1.11
Shroom3-203ENSMUST00000113055 SmcpP15265 143 aa8.08□□□□□ -1.12
Shroom3-203ENSMUST00000113055 Chd7A2AJK6 2986 aaKnown RBP8.07□□□□□ -1.12
Shroom3-203ENSMUST00000113055 Chd6A3KFM7 2711 aa8.07□□□□□ -1.12
Shroom3-203ENSMUST00000113055 Stab2Q8R4U0 2559 aa8.04□□□□□ -1.12
Shroom3-203ENSMUST00000113055 Celsr1O35161 3034 aa8.03□□□□□ -1.12
Shroom3-203ENSMUST00000113055 Brca2P97929 3329 aa8.02□□□□□ -1.13
Shroom3-203ENSMUST00000113055 Gm40193A0A1B0GT39 78 aa8.02□□□□□ -1.13
Shroom3-203ENSMUST00000113055 Fbn2Q61555 2907 aa7.99□□□□□ -1.13
Shroom3-203ENSMUST00000113055 Col6a3E9PWQ3 3284 aa7.98□□□□□ -1.13
Shroom3-203ENSMUST00000113055 Pkd1l1Q8R526 2615 aa7.96□□□□□ -1.14
Shroom3-203ENSMUST00000113055 AspmQ8CJ27 3122 aa7.94□□□□□ -1.14
Shroom3-203ENSMUST00000113055 Lama1P19137 3084 aa7.91□□□□□ -1.14
Shroom3-203ENSMUST00000113055 KalrnA2CG49 2964 aa7.91□□□□□ -1.14
Shroom3-203ENSMUST00000113055 Gm20537G3UYK7 97 aa7.89□□□□□ -1.15
Shroom3-203ENSMUST00000113055 Itpr1P11881 2749 aa7.88□□□□□ -1.15
Shroom3-203ENSMUST00000113055 Lrrc37aB1AWG4 3215 aa7.85□□□□□ -1.15
Shroom3-203ENSMUST00000113055 A930033H14RikG5E8X6 103 aa7.84□□□□□ -1.15
Shroom3-203ENSMUST00000113055 B930094E09RikQ8C4T2 136 aa7.84□□□□□ -1.15
Shroom3-203ENSMUST00000113055 Dchs2A0A0A6YW72 3346 aa7.83□□□□□ -1.16
Shroom3-203ENSMUST00000113055 Myo15aQ9QZZ4 3511 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 72.4 ms