RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Szt2A2A9C3 3431 aa3.77□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Odf3bQ5M8M2 238 aa3.76□□□□□ -1.81
Ubr4-201ENSMUST00000097822 FrylF8VQ05 3007 aa3.76□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Defb9Q8R2I6 67 aa3.75□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Nsd1O88491 2588 aaKnown RBP3.75□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Ranbp2Q9ERU9 3053 aaKnown RBP3.75□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Map1aQ9QYR6 2776 aa3.74□□□□□ -1.81
Ubr4-201ENSMUST00000097822 CicQ924A2 2510 aa3.73□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Gm3250E9Q1M3 230 aa3.73□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Lama1P19137 3084 aa3.72□□□□□ -1.81
Ubr4-201ENSMUST00000097822 AspmQ8CJ27 3122 aa3.72□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Bod1lE9Q6J5 3032 aa3.72□□□□□ -1.81
Ubr4-201ENSMUST00000097822 AtmQ62388 3066 aa3.71□□□□□ -1.81
Ubr4-201ENSMUST00000097822 Akap13E9Q394 2776 aa3.71□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Gm9955Q8CEJ8 102 aa3.7□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Gm10139O88245 57 aa3.69□□□□□ -1.82
Ubr4-201ENSMUST00000097822 OxtP35454 125 aa3.69□□□□□ -1.82
Ubr4-201ENSMUST00000097822 FlnbQ80X90 2602 aaKnown RBP3.68□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Utp20Q5XG71 2788 aaKnown RBP3.68□□□□□ -1.82
Ubr4-201ENSMUST00000097822 FryE9Q8I9 3020 aa3.67□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Dmxl1Q6PNC0 3013 aa3.67□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Lrrc37aB1AWG4 3215 aa3.66□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Wdfy4E9Q2M9 3149 aa3.66□□□□□ -1.82
Ubr4-201ENSMUST00000097822 NipblQ6KCD5 2798 aaKnown RBP3.65□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Defb10Q8R2I8 73 aa3.65□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Col6a3E9PWQ3 3284 aa3.65□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Romo1P60603 79 aa3.65□□□□□ -1.82
Ubr4-201ENSMUST00000097822 Gm4491E0CX42 125 aa3.65□□□□□ -1.83
Ubr4-201ENSMUST00000097822 MgaA2AWL7 3003 aaKnown RBP3.65□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Brca2P97929 3329 aa3.65□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Celsr3Q91ZI0 3301 aa3.65□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Lelp1Q9DAE3 120 aa3.64□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Sprr1aQ62266 144 aa3.64□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Plac8Q9JI48 112 aa3.64□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Ash1lQ99MY8 2958 aa3.64□□□□□ -1.83
Ubr4-201ENSMUST00000097822 FlnaQ8BTM8 2647 aaKnown RBP3.63□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Hectd1Q69ZR2 2618 aaKnown RBP3.63□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Gm2310J3QNJ2 377 aa3.63□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Chd6A3KFM7 2711 aa3.62□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Myo15bI7HPW8 3033 aa3.61□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Spink7Q6IE32 76 aa3.61□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Ndufaf8A2AMZ4 74 aa3.61□□□□□ -1.83
Ubr4-201ENSMUST00000097822 BptfA2A654 3036 aaKnown RBP3.6□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Gm9195A0A140LHT4 2805 aa3.6□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Gm16253D3Z167 63 aa3.6□□□□□ -1.83
Ubr4-201ENSMUST00000097822 KalrnA2CG49 2964 aa3.6□□□□□ -1.83
Ubr4-201ENSMUST00000097822 Gm3233E9Q2H5 230 aa3.59□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Gm10382Q3V0T5 144 aa3.59□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Mast4Q811L6 2618 aa3.59□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Rpl37Q9D823 97 aa3.59□□□□□ -1.84
Ubr4-201ENSMUST00000097822 NbdyA0A0N4SUI7 68 aa3.58□□□□□ -1.84
Ubr4-201ENSMUST00000097822 AtrQ9JKK8 2635 aa3.58□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Dmxl2Q8BPN8 3032 aa3.58□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Gm10065F6TJM2 114 aa3.57□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Gm9508A0A1W2P7W0 230 aa3.56□□□□□ -1.84
Ubr4-201ENSMUST00000097822 AW011738F6S7Q2 159 aa3.56□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Krtap14O08640 167 aa3.56□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Celsr1O35161 3034 aa3.56□□□□□ -1.84
Ubr4-201ENSMUST00000097822 DspE9Q557 2883 aaKnown RBP3.55□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Defb11Q8R2I7 77 aa3.55□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Stab1Q8R4Y4 2571 aa3.53□□□□□ -1.84
Ubr4-201ENSMUST00000097822 Camk2n1Q6QWF9 78 aa3.53□□□□□ -1.84
Ubr4-201ENSMUST00000097822 9530053A07RikE9PVG8 2581 aa3.52□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Fbn2Q61555 2907 aa3.51□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Tex15F8VPN2 2785 aa3.51□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Gm7138L7N2C3 230 aa3.51□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Gm3238W4VSP7 230 aa3.51□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Prm2P07978 107 aa3.51□□□□□ -1.85
Ubr4-201ENSMUST00000097822 SpegQ62407 3262 aa3.5□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Igsf10Q3V1M1 2594 aa3.5□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Gm9112A2AI92 75 aa3.5□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Ubr5Q80TP3 2792 aa3.5□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Fam229aB2KGE5 128 aa3.49□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Tep1P97499 2629 aa3.49□□□□□ -1.85
Ubr4-201ENSMUST00000097822 VcanQ62059 3357 aa3.49□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Itpr3P70227 2670 aa3.47□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Dchs1E9PVD3 3291 aa3.47□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Adgrg4B7ZCC9 3073 aa3.47□□□□□ -1.85
Ubr4-201ENSMUST00000097822 Cox6b2Q80ZN9 88 aa3.46□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Dchs2A0A0A6YW72 3346 aa3.45□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Gm7137J3QMW1 236 aa3.45□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Gm11565A2A4M7 156 aa3.45□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Nbeal2Q6ZQA0 2742 aa3.45□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Stab2Q8R4U0 2559 aa3.44□□□□□ -1.86
Ubr4-201ENSMUST00000097822 NbeaQ9EPN1 2936 aa3.44□□□□□ -1.86
Ubr4-201ENSMUST00000097822 2310050C09RikG5E8Z3 280 aa3.44□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Igfn1Q3KNY0 2849 aa3.44□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Trank1Q8BV79 2999 aa3.44□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Gm19426M0QWC7 77 aa3.43□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Itpr1P11881 2749 aa3.43□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Pkd1l1Q8R526 2615 aa3.43□□□□□ -1.86
Ubr4-201ENSMUST00000097822 D6Ertd527eA0A0N4SWI3 464 aa3.42□□□□□ -1.86
Ubr4-201ENSMUST00000097822 TgO08710 2766 aa3.42□□□□□ -1.86
Ubr4-201ENSMUST00000097822 ApcQ61315 2845 aa3.42□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Krtap29-1A2A5X4 342 aa3.41□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Krtap13O88375 197 aa3.41□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Col6a5A6H584 2640 aa3.41□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Wdfy3Q6VNB8 3508 aa3.41□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Krtap15-1Q9QZU5 150 aa3.4□□□□□ -1.86
Ubr4-201ENSMUST00000097822 Sec61bQ9CQS8 96 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms