RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 AW011738F6S7Q2 159 aa7.48□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 Gm10382Q3V0T5 144 aa7.47□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 NbdyA0A0N4SUI7 68 aa7.47□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 AtrQ9JKK8 2635 aa7.46□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 Gm3233E9Q2H5 230 aa7.44□□□□□ -1.22
Pcdhac1-201ENSMUST00000007584 CenpfE9Q3P4 2997 aaKnown RBP7.44□□□□□ -1.22
Pcdhac1-201ENSMUST00000007584 FlnbQ80X90 2602 aaKnown RBP7.44□□□□□ -1.22
Pcdhac1-201ENSMUST00000007584 Unc80Q8BLN6 3261 aa7.41□□□□□ -1.22
Pcdhac1-201ENSMUST00000007584 Camk2n1Q6QWF9 78 aa7.41□□□□□ -1.22
Pcdhac1-201ENSMUST00000007584 Hectd1Q69ZR2 2618 aaKnown RBP7.4□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Lama2Q60675 3118 aaKnown RBP7.4□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Ndufaf8A2AMZ4 74 aa7.39□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Gm10065F6TJM2 114 aa7.39□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Gm16253D3Z167 63 aa7.37□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Mki67E9PVX6 3177 aaKnown RBP7.37□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Fam229aB2KGE5 128 aa7.37□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Cdh23Q99PF4 3354 aa7.36□□□□□ -1.23
Pcdhac1-201ENSMUST00000007584 Gm9508A0A1W2P7W0 230 aa7.34□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 FlnaQ8BTM8 2647 aaKnown RBP7.33□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 Sprr1aQ62266 144 aa7.33□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 Map1aQ9QYR6 2776 aa7.31□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 Gm7138L7N2C3 230 aa7.3□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 Gm3238W4VSP7 230 aa7.3□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 Mast4Q811L6 2618 aa7.28□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 Krtap15-1Q9QZU5 150 aa7.27□□□□□ -1.24
Pcdhac1-201ENSMUST00000007584 NipblQ6KCD5 2798 aaKnown RBP7.27□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Jbts17Q8CE72 3214 aa7.26□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Szt2A2A9C3 3431 aa7.26□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Chd6A3KFM7 2711 aa7.25□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Lelp1Q9DAE3 120 aa7.24□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Gm9112A2AI92 75 aa7.23□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Utp20Q5XG71 2788 aaKnown RBP7.23□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Cfap54Q8C6S9 3106 aa7.23□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Tnrc18Q80WC3 2878 aa7.22□□□□□ -1.25
Pcdhac1-201ENSMUST00000007584 Stab1Q8R4Y4 2571 aa7.21□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Gm7137J3QMW1 236 aa7.2□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Gm19426M0QWC7 77 aa7.2□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Prune2Q52KR3 3084 aa7.19□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Tep1P97499 2629 aa7.19□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Col12a1Q60847 3120 aa7.19□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 9530053A07RikE9PVG8 2581 aa7.18□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Cox6b2Q80ZN9 88 aa7.18□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Gm2310J3QNJ2 377 aa7.17□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Vps13aQ5H8C4 3166 aa7.17□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Krtap14O08640 167 aa7.16□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Chd7A2AJK6 2986 aaKnown RBP7.16□□□□□ -1.26
Pcdhac1-201ENSMUST00000007584 Gm9195A0A140LHT4 2805 aa7.14□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 Itpr3P70227 2670 aa7.13□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 BC029722A0A0N4SW31 51 aa7.13□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 Ubr5Q80TP3 2792 aa7.13□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 OxtP35454 125 aa7.12□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 2310050C09RikG5E8Z3 280 aa7.09□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 Gm7173A0A0G2JEB6 3132 aa7.09□□□□□ -1.27
Pcdhac1-201ENSMUST00000007584 Rev3lQ61493 3122 aa7.09□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Frem2Q6NVD0 3160 aa7.08□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Igsf10Q3V1M1 2594 aa7.07□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Ash1lQ99MY8 2958 aa7.06□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Brca2P97929 3329 aa7.05□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Krtap13O88375 197 aa7.05□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Sec61bQ9CQS8 96 aaKnown RBP7.05□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Ranbp2Q9ERU9 3053 aaKnown RBP7.03□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Stab2Q8R4U0 2559 aa7.03□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Bod1lE9Q6J5 3032 aa7.03□□□□□ -1.28
Pcdhac1-201ENSMUST00000007584 Gm5767A0A0J9YTU8 78 aa7.02□□□□□ -1.29
Pcdhac1-201ENSMUST00000007584 Wdfy3Q6VNB8 3508 aa6.99□□□□□ -1.29
Pcdhac1-201ENSMUST00000007584 Krtap29-1A2A5X4 342 aa6.97□□□□□ -1.29
Pcdhac1-201ENSMUST00000007584 Gm17349F7BGH6 99 aa6.96□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 Tex15F8VPN2 2785 aa6.96□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 Pkd1l1Q8R526 2615 aa6.95□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 Dmxl1Q6PNC0 3013 aa6.95□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 DmdP11531 3678 aa6.94□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 D6Ertd527eA0A0N4SWI3 464 aa6.93□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 Prm2P07978 107 aa6.92□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 AtmQ62388 3066 aa6.92□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 Itpr1P11881 2749 aa6.91□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 FrylF8VQ05 3007 aa6.9□□□□□ -1.3
Pcdhac1-201ENSMUST00000007584 Myo15aQ9QZZ4 3511 aa6.89□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 Nbeal2Q6ZQA0 2742 aa6.89□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 Lama1P19137 3084 aa6.88□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 MgaA2AWL7 3003 aaKnown RBP6.86□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 Lrrc37aB1AWG4 3215 aa6.86□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 Col6a3E9PWQ3 3284 aa6.85□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 Gm11565A2A4M7 156 aa6.85□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 AspmQ8CJ27 3122 aa6.84□□□□□ -1.31
Pcdhac1-201ENSMUST00000007584 Celsr3Q91ZI0 3301 aa6.83□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 DspE9Q557 2883 aaKnown RBP6.82□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 Dchs2A0A0A6YW72 3346 aa6.81□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 Gm36176A0A1W2P8D5 158 aa6.81□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 Col6a5A6H584 2640 aa6.8□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 TgO08710 2766 aa6.78□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 Gm40193A0A1B0GT39 78 aa6.78□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 KalrnA2CG49 2964 aa6.77□□□□□ -1.32
Pcdhac1-201ENSMUST00000007584 Gm21887J3QQ04 176 aa6.77□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 VcanQ62059 3357 aa6.77□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 Gm20537G3UYK7 97 aa6.76□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 FryE9Q8I9 3020 aa6.75□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 Fbn2Q61555 2907 aa6.75□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 Gm5965D3Z724 196 aa6.72□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 ApcQ61315 2845 aa6.72□□□□□ -1.33
Pcdhac1-201ENSMUST00000007584 Dchs1E9PVD3 3291 aa6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms