RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Bahcc1Q3UHR0 2643 aa7.45□□□□□ -1.22
Ncan-201ENSMUST00000002412 Usp9yF8VPU6 2556 aa7.44□□□□□ -1.22
Ncan-201ENSMUST00000002412 Nsd1O88491 2588 aaKnown RBP7.44□□□□□ -1.22
Ncan-201ENSMUST00000002412 Krtap13O88375 197 aa7.41□□□□□ -1.22
Ncan-201ENSMUST00000002412 Sec61bQ9CQS8 96 aaKnown RBP7.41□□□□□ -1.22
Ncan-201ENSMUST00000002412 TrrapQ80YV3 2565 aaKnown RBP7.4□□□□□ -1.22
Ncan-201ENSMUST00000002412 Gm16253D3Z167 63 aa7.4□□□□□ -1.23
Ncan-201ENSMUST00000002412 PcntP48725 2898 aa7.39□□□□□ -1.23
Ncan-201ENSMUST00000002412 CicQ924A2 2510 aa7.38□□□□□ -1.23
Ncan-201ENSMUST00000002412 CenpfE9Q3P4 2997 aaKnown RBP7.36□□□□□ -1.23
Ncan-201ENSMUST00000002412 Krtap14O08640 167 aa7.36□□□□□ -1.23
Ncan-201ENSMUST00000002412 Gm5767A0A0J9YTU8 78 aa7.34□□□□□ -1.23
Ncan-201ENSMUST00000002412 Ankrd17Q99NH0 2603 aaKnown RBP7.31□□□□□ -1.24
Ncan-201ENSMUST00000002412 Lelp1Q9DAE3 120 aa7.3□□□□□ -1.24
Ncan-201ENSMUST00000002412 Sprr1aQ62266 144 aa7.3□□□□□ -1.24
Ncan-201ENSMUST00000002412 Gm21887J3QQ04 176 aa7.29□□□□□ -1.24
Ncan-201ENSMUST00000002412 Usp24B1AY13 2617 aaKnown RBP7.28□□□□□ -1.24
Ncan-201ENSMUST00000002412 Bod1lE9Q6J5 3032 aa7.28□□□□□ -1.24
Ncan-201ENSMUST00000002412 Cox6b2Q80ZN9 88 aa7.27□□□□□ -1.25
Ncan-201ENSMUST00000002412 Mki67E9PVX6 3177 aaKnown RBP7.27□□□□□ -1.25
Ncan-201ENSMUST00000002412 HttP42859 3119 aa7.26□□□□□ -1.25
Ncan-201ENSMUST00000002412 Lama2Q60675 3118 aaKnown RBP7.25□□□□□ -1.25
Ncan-201ENSMUST00000002412 Col12a1Q60847 3120 aa7.24□□□□□ -1.25
Ncan-201ENSMUST00000002412 Prrc2cQ3TLH4 2846 aaKnown RBP7.24□□□□□ -1.25
Ncan-201ENSMUST00000002412 FasnP19096 2504 aaKnown RBP7.24□□□□□ -1.25
Ncan-201ENSMUST00000002412 Gm7173A0A0G2JEB6 3132 aa7.23□□□□□ -1.25
Ncan-201ENSMUST00000002412 Abca12E9Q876 2595 aa7.23□□□□□ -1.25
Ncan-201ENSMUST00000002412 Cdh23Q99PF4 3354 aa7.23□□□□□ -1.25
Ncan-201ENSMUST00000002412 Krtap29-1A2A5X4 342 aa7.22□□□□□ -1.25
Ncan-201ENSMUST00000002412 Gm36176A0A1W2P8D5 158 aa7.19□□□□□ -1.26
Ncan-201ENSMUST00000002412 Prm2P07978 107 aa7.19□□□□□ -1.26
Ncan-201ENSMUST00000002412 Tnp1P10856 55 aa7.16□□□□□ -1.26
Ncan-201ENSMUST00000002412 Zfp292Q9Z2U2 2698 aa7.15□□□□□ -1.26
Ncan-201ENSMUST00000002412 Unc79Q0KK59 2596 aa7.14□□□□□ -1.27
Ncan-201ENSMUST00000002412 Gm9507D3Z5T3 223 aa7.14□□□□□ -1.27
Ncan-201ENSMUST00000002412 Krtap10-4Q08EG8 221 aa7.14□□□□□ -1.27
Ncan-201ENSMUST00000002412 Ranbp2Q9ERU9 3053 aaKnown RBP7.13□□□□□ -1.27
Ncan-201ENSMUST00000002412 Gcn1E9PVA8 2671 aaKnown RBP7.12□□□□□ -1.27
Ncan-201ENSMUST00000002412 Gm2310J3QNJ2 377 aa7.11□□□□□ -1.27
Ncan-201ENSMUST00000002412 Fn1P11276 2477 aaKnown RBP7.1□□□□□ -1.27
Ncan-201ENSMUST00000002412 Myo18bE9PV66 2605 aa7.09□□□□□ -1.27
Ncan-201ENSMUST00000002412 Kmt2bO08550 2713 aa7.09□□□□□ -1.27
Ncan-201ENSMUST00000002412 AtmQ62388 3066 aa7.09□□□□□ -1.27
Ncan-201ENSMUST00000002412 Vps13aQ5H8C4 3166 aa7.08□□□□□ -1.28
Ncan-201ENSMUST00000002412 Ankrd11E9Q4F7 2643 aa7.08□□□□□ -1.28
Ncan-201ENSMUST00000002412 Krtap10-10A0A1W2P7T6 217 aa7.06□□□□□ -1.28
Ncan-201ENSMUST00000002412 Rev3lQ61493 3122 aa7.05□□□□□ -1.28
Ncan-201ENSMUST00000002412 Celsr3Q91ZI0 3301 aa7.04□□□□□ -1.28
Ncan-201ENSMUST00000002412 Gm9195A0A140LHT4 2805 aa7.03□□□□□ -1.28
Ncan-201ENSMUST00000002412 Szt2A2A9C3 3431 aa7.01□□□□□ -1.29
Ncan-201ENSMUST00000002412 Notch1Q01705 2531 aa7□□□□□ -1.29
Ncan-201ENSMUST00000002412 D6Ertd527eA0A0N4SWI3 464 aa6.99□□□□□ -1.29
Ncan-201ENSMUST00000002412 Gm5965D3Z724 196 aa6.99□□□□□ -1.29
Ncan-201ENSMUST00000002412 Col6a3E9PWQ3 3284 aa6.98□□□□□ -1.29
Ncan-201ENSMUST00000002412 BptfA2A654 3036 aaKnown RBP6.98□□□□□ -1.29
Ncan-201ENSMUST00000002412 Cfap54Q8C6S9 3106 aa6.96□□□□□ -1.3
Ncan-201ENSMUST00000002412 2310057N15RikQ9D6T8 200 aa6.95□□□□□ -1.3
Ncan-201ENSMUST00000002412 Unc80Q8BLN6 3261 aa6.95□□□□□ -1.3
Ncan-201ENSMUST00000002412 FlnaQ8BTM8 2647 aaKnown RBP6.95□□□□□ -1.3
Ncan-201ENSMUST00000002412 Map1aQ9QYR6 2776 aa6.9□□□□□ -1.3
Ncan-201ENSMUST00000002412 Gm40193A0A1B0GT39 78 aa6.89□□□□□ -1.31
Ncan-201ENSMUST00000002412 Gm11565A2A4M7 156 aa6.89□□□□□ -1.31
Ncan-201ENSMUST00000002412 Hectd1Q69ZR2 2618 aaKnown RBP6.86□□□□□ -1.31
Ncan-201ENSMUST00000002412 AtrQ9JKK8 2635 aa6.84□□□□□ -1.31
Ncan-201ENSMUST00000002412 Frem2Q6NVD0 3160 aa6.84□□□□□ -1.31
Ncan-201ENSMUST00000002412 MgaA2AWL7 3003 aaKnown RBP6.84□□□□□ -1.31
Ncan-201ENSMUST00000002412 Gm20537G3UYK7 97 aa6.84□□□□□ -1.32
Ncan-201ENSMUST00000002412 Dmxl1Q6PNC0 3013 aa6.82□□□□□ -1.32
Ncan-201ENSMUST00000002412 Ash1lQ99MY8 2958 aa6.82□□□□□ -1.32
Ncan-201ENSMUST00000002412 FlnbQ80X90 2602 aaKnown RBP6.8□□□□□ -1.32
Ncan-201ENSMUST00000002412 Brca2P97929 3329 aa6.8□□□□□ -1.32
Ncan-201ENSMUST00000002412 NipblQ6KCD5 2798 aaKnown RBP6.77□□□□□ -1.33
Ncan-201ENSMUST00000002412 Akap13E9Q394 2776 aa6.77□□□□□ -1.33
Ncan-201ENSMUST00000002412 Gm2696A0A1W2P709 240 aa6.77□□□□□ -1.33
Ncan-201ENSMUST00000002412 Gm9918Q8BUR5 174 aa6.76□□□□□ -1.33
Ncan-201ENSMUST00000002412 AspmQ8CJ27 3122 aa6.75□□□□□ -1.33
Ncan-201ENSMUST00000002412 VcanQ62059 3357 aa6.72□□□□□ -1.33
Ncan-201ENSMUST00000002412 Tnrc18Q80WC3 2878 aa6.71□□□□□ -1.34
Ncan-201ENSMUST00000002412 Lrrc37aB1AWG4 3215 aa6.7□□□□□ -1.34
Ncan-201ENSMUST00000002412 Zfhx3Q61329 3726 aa6.69□□□□□ -1.34
Ncan-201ENSMUST00000002412 Chd7A2AJK6 2986 aaKnown RBP6.69□□□□□ -1.34
Ncan-201ENSMUST00000002412 Lama1P19137 3084 aa6.69□□□□□ -1.34
Ncan-201ENSMUST00000002412 Dchs1E9PVD3 3291 aa6.69□□□□□ -1.34
Ncan-201ENSMUST00000002412 Rps29P62274 56 aa6.68□□□□□ -1.34
Ncan-201ENSMUST00000002412 Chd6A3KFM7 2711 aa6.68□□□□□ -1.34
Ncan-201ENSMUST00000002412 Tnp2P11378 117 aa6.68□□□□□ -1.34
Ncan-201ENSMUST00000002412 B930094E09RikQ8C4T2 136 aa6.68□□□□□ -1.34
Ncan-201ENSMUST00000002412 Myo15aQ9QZZ4 3511 aa6.68□□□□□ -1.34
Ncan-201ENSMUST00000002412 Stab1Q8R4Y4 2571 aa6.67□□□□□ -1.34
Ncan-201ENSMUST00000002412 SpegQ62407 3262 aa6.67□□□□□ -1.34
Ncan-201ENSMUST00000002412 FrylF8VQ05 3007 aa6.65□□□□□ -1.34
Ncan-201ENSMUST00000002412 2310061N02RikQ9D6S9 174 aa6.64□□□□□ -1.35
Ncan-201ENSMUST00000002412 Dchs2A0A0A6YW72 3346 aa6.63□□□□□ -1.35
Ncan-201ENSMUST00000002412 9530053A07RikE9PVG8 2581 aa6.62□□□□□ -1.35
Ncan-201ENSMUST00000002412 Celsr1O35161 3034 aa6.61□□□□□ -1.35
Ncan-201ENSMUST00000002412 DspE9Q557 2883 aaKnown RBP6.59□□□□□ -1.35
Ncan-201ENSMUST00000002412 Fbn2Q61555 2907 aa6.59□□□□□ -1.35
Ncan-201ENSMUST00000002412 KalrnA2CG49 2964 aa6.58□□□□□ -1.36
Ncan-201ENSMUST00000002412 Itpr1P11881 2749 aa6.56□□□□□ -1.36
Ncan-201ENSMUST00000002412 Tep1P97499 2629 aa6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms