RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Gpr15lA0A0B4J1N3 78 aa11.17□□□□□ -0.62
Usp47-201ENSMUST00000106653 UtrnE9Q6R7 3430 aa11.16□□□□□ -0.62
Usp47-201ENSMUST00000106653 Unc79Q0KK59 2596 aa11.16□□□□□ -0.62
Usp47-201ENSMUST00000106653 PtprqP0C5E4 2300 aa11.15□□□□□ -0.62
Usp47-201ENSMUST00000106653 Cep192E9Q4Y4 2514 aaKnown RBP11.15□□□□□ -0.62
Usp47-201ENSMUST00000106653 Gm5617Q91VN2 117 aa11.14□□□□□ -0.63
Usp47-201ENSMUST00000106653 Bean1Q9EQG5 255 aa11.14□□□□□ -0.63
Usp47-201ENSMUST00000106653 Ankrd17Q99NH0 2603 aaKnown RBP11.13□□□□□ -0.63
Usp47-201ENSMUST00000106653 Q8BT88 171 aa11.13□□□□□ -0.63
Usp47-201ENSMUST00000106653 Spaca4Q80ZQ0 127 aa11.12□□□□□ -0.63
Usp47-201ENSMUST00000106653 Gm10308Q9CVR5 141 aa11.12□□□□□ -0.63
Usp47-201ENSMUST00000106653 AW011738F6S7Q2 159 aa11.12□□□□□ -0.63
Usp47-201ENSMUST00000106653 Sprr1bQ62267 153 aa11.12□□□□□ -0.63
Usp47-201ENSMUST00000106653 Eif4ebp3Q80VV3 101 aa11.11□□□□□ -0.63
Usp47-201ENSMUST00000106653 Gm10197F6QEY5 67 aa11.11□□□□□ -0.63
Usp47-201ENSMUST00000106653 AY074887Q8R5F9 132 aa11.1□□□□□ -0.63
Usp47-201ENSMUST00000106653 Rpl37aP61514 92 aa11.1□□□□□ -0.63
Usp47-201ENSMUST00000106653 RetnlbQ99P86 105 aa11.1□□□□□ -0.63
Usp47-201ENSMUST00000106653 Gm10999F6Q4M4 69 aa11.08□□□□□ -0.64
Usp47-201ENSMUST00000106653 Krtap16-1A2A5X5 502 aa11.08□□□□□ -0.64
Usp47-201ENSMUST00000106653 Lelp1Q9DAE3 120 aa11.08□□□□□ -0.64
Usp47-201ENSMUST00000106653 Gm17689B3GLJ4 109 aa11.07□□□□□ -0.64
Usp47-201ENSMUST00000106653 Gm17606F6ZL36 78 aa11.07□□□□□ -0.64
Usp47-201ENSMUST00000106653 Gm11565A2A4M7 156 aa11.05□□□□□ -0.64
Usp47-201ENSMUST00000106653 C530025M09RikF6RGA8 229 aa11.03□□□□□ -0.64
Usp47-201ENSMUST00000106653 Spint4Q9D263 159 aa11.02□□□□□ -0.65
Usp47-201ENSMUST00000106653 A930002H24RikQ8C8Y3 163 aa11.01□□□□□ -0.65
Usp47-201ENSMUST00000106653 Cep350E9Q309 3095 aa11.01□□□□□ -0.65
Usp47-201ENSMUST00000106653 Myo18bE9PV66 2605 aa10.97□□□□□ -0.65
Usp47-201ENSMUST00000106653 PolqQ8CGS6 2544 aa10.95□□□□□ -0.66
Usp47-201ENSMUST00000106653 Gm7276Q3TYW4 209 aa10.95□□□□□ -0.66
Usp47-201ENSMUST00000106653 7530416G11RikJ3QJX6 159 aa10.94□□□□□ -0.66
Usp47-201ENSMUST00000106653 A530084C06RikQ3UTW2 186 aa10.92□□□□□ -0.66
Usp47-201ENSMUST00000106653 4930507D05RikQ8C9C9 103 aa10.92□□□□□ -0.66
Usp47-201ENSMUST00000106653 Defb9Q8R2I6 67 aa10.92□□□□□ -0.66
Usp47-201ENSMUST00000106653 Rps28P62858 69 aaKnown RBP10.91□□□□□ -0.66
Usp47-201ENSMUST00000106653 Gm7138L7N2C3 230 aa10.89□□□□□ -0.67
Usp47-201ENSMUST00000106653 Plac8Q9JI48 112 aa10.89□□□□□ -0.67
Usp47-201ENSMUST00000106653 Gm3238W4VSP7 230 aa10.89□□□□□ -0.67
Usp47-201ENSMUST00000106653 CicQ924A2 2510 aa10.88□□□□□ -0.67
Usp47-201ENSMUST00000106653 Limd2Q8BGB5 128 aa10.88□□□□□ -0.67
Usp47-201ENSMUST00000106653 Gm20661K7N787 53 aa10.87□□□□□ -0.67
Usp47-201ENSMUST00000106653 Gm11213A0A1B0GR83 88 aa10.86□□□□□ -0.67
Usp47-201ENSMUST00000106653 CnbpP53996 178 aaKnown RBP10.86□□□□□ -0.67
Usp47-201ENSMUST00000106653 Q8BGJ3 129 aa10.85□□□□□ -0.67
Usp47-201ENSMUST00000106653 A330070K13RikQ8CA53 115 aa10.85□□□□□ -0.67
Usp47-201ENSMUST00000106653 Prr13Q9CQJ5 137 aa10.85□□□□□ -0.67
Usp47-201ENSMUST00000106653 Coa5Q99M07 74 aa10.84□□□□□ -0.67
Usp47-201ENSMUST00000106653 Defb1P56386 69 aa10.84□□□□□ -0.67
Usp47-201ENSMUST00000106653 TrioQ0KL02 3102 aa10.84□□□□□ -0.67
Usp47-201ENSMUST00000106653 OxtP35454 125 aa10.83□□□□□ -0.68
Usp47-201ENSMUST00000106653 Prune2Q52KR3 3084 aa10.8□□□□□ -0.68
Usp47-201ENSMUST00000106653 Fam104aA2A6P4 185 aa10.79□□□□□ -0.68
Usp47-201ENSMUST00000106653 Anapc11Q9CPX9 84 aa10.78□□□□□ -0.68
Usp47-201ENSMUST00000106653 Zcchc13Q9D548 170 aa10.77□□□□□ -0.68
Usp47-201ENSMUST00000106653 Gm12216A0A1W2P827 62 aa10.77□□□□□ -0.69
Usp47-201ENSMUST00000106653 Phxr5P08399 672 aa10.77□□□□□ -0.69
Usp47-201ENSMUST00000106653 Gm7137J3QMW1 236 aa10.76□□□□□ -0.69
Usp47-201ENSMUST00000106653 Cypt15B1AXS0 87 aa10.76□□□□□ -0.69
Usp47-201ENSMUST00000106653 Cdc42se1Q8BHL7 80 aa10.74□□□□□ -0.69
Usp47-201ENSMUST00000106653 Lama3Q61789 3330 aa10.74□□□□□ -0.69
Usp47-201ENSMUST00000106653 Usp9yF8VPU6 2556 aa10.74□□□□□ -0.69
Usp47-201ENSMUST00000106653 FlnaQ8BTM8 2647 aaKnown RBP10.73□□□□□ -0.69
Usp47-201ENSMUST00000106653 FlnbQ80X90 2602 aaKnown RBP10.73□□□□□ -0.69
Usp47-201ENSMUST00000106653 Gm9195A0A140LHT4 2805 aa10.71□□□□□ -0.7
Usp47-201ENSMUST00000106653 Nbeal1E9PYP2 2688 aa10.7□□□□□ -0.7
Usp47-201ENSMUST00000106653 Lama2Q60675 3118 aaKnown RBP10.68□□□□□ -0.7
Usp47-201ENSMUST00000106653 Gcn1E9PVA8 2671 aaKnown RBP10.68□□□□□ -0.7
Usp47-201ENSMUST00000106653 Smim29Q8R043 75 aa10.67□□□□□ -0.7
Usp47-201ENSMUST00000106653 Ankrd11E9Q4F7 2643 aa10.66□□□□□ -0.7
Usp47-201ENSMUST00000106653 Hectd1Q69ZR2 2618 aaKnown RBP10.66□□□□□ -0.7
Usp47-201ENSMUST00000106653 Tnrc18Q80WC3 2878 aa10.65□□□□□ -0.7
Usp47-201ENSMUST00000106653 AtrQ9JKK8 2635 aa10.64□□□□□ -0.71
Usp47-201ENSMUST00000106653 Phxr4P15974 95 aa10.62□□□□□ -0.71
Usp47-201ENSMUST00000106653 Jbts17Q8CE72 3214 aa10.6□□□□□ -0.71
Usp47-201ENSMUST00000106653 Usp34Q6ZQ93 3582 aa10.59□□□□□ -0.71
Usp47-201ENSMUST00000106653 NbdyA0A0N4SUI7 68 aa10.58□□□□□ -0.72
Usp47-201ENSMUST00000106653 Nsd1O88491 2588 aaKnown RBP10.58□□□□□ -0.72
Usp47-201ENSMUST00000106653 Cypt14J3QPF7 87 aa10.58□□□□□ -0.72
Usp47-201ENSMUST00000106653 Gm10065F6TJM2 114 aa10.57□□□□□ -0.72
Usp47-201ENSMUST00000106653 Dmbt1Q60997 2085 aa10.57□□□□□ -0.72
Usp47-201ENSMUST00000106653 Fam229bQ8CF36 80 aa10.57□□□□□ -0.72
Usp47-201ENSMUST00000106653 Gm26620Q9CY65 116 aa10.57□□□□□ -0.72
Usp47-201ENSMUST00000106653 Col12a1Q60847 3120 aa10.57□□□□□ -0.72
Usp47-201ENSMUST00000106653 Chd7A2AJK6 2986 aaKnown RBP10.55□□□□□ -0.72
Usp47-201ENSMUST00000106653 HttP42859 3119 aa10.54□□□□□ -0.72
Usp47-201ENSMUST00000106653 Uqcr11Q9CPX8 56 aa10.54□□□□□ -0.72
Usp47-201ENSMUST00000106653 Chtf8P0CG14 533 aa10.53□□□□□ -0.72
Usp47-201ENSMUST00000106653 Gm10320E9PW43 113 aa10.52□□□□□ -0.72
Usp47-201ENSMUST00000106653 FasnP19096 2504 aaKnown RBP10.5□□□□□ -0.73
Usp47-201ENSMUST00000106653 Mki67E9PVX6 3177 aaKnown RBP10.48□□□□□ -0.73
Usp47-201ENSMUST00000106653 Gm36176A0A1W2P8D5 158 aa10.48□□□□□ -0.73
Usp47-201ENSMUST00000106653 Rnase13Q5GAM7 153 aa10.46□□□□□ -0.73
Usp47-201ENSMUST00000106653 Myo15bI7HPW8 3033 aa10.46□□□□□ -0.74
Usp47-201ENSMUST00000106653 Usp24B1AY13 2617 aaKnown RBP10.46□□□□□ -0.74
Usp47-201ENSMUST00000106653 Gm17349F7BGH6 99 aa10.45□□□□□ -0.74
Usp47-201ENSMUST00000106653 Prrc2cQ3TLH4 2846 aaKnown RBP10.43□□□□□ -0.74
Usp47-201ENSMUST00000106653 Itpr1P11881 2749 aa10.43□□□□□ -0.74
Usp47-201ENSMUST00000106653 Gm7173A0A0G2JEB6 3132 aa10.43□□□□□ -0.74
Usp47-201ENSMUST00000106653 Rev3lQ61493 3122 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms