RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Defb45Q3V490 66 aa13.43□□□□□ -0.26
Trim71-201ENSMUST00000111816 AplnQ9R0R4 77 aa13.42□□□□□ -0.26
Trim71-201ENSMUST00000111816 CdsnQ7TPC1 561 aa13.42□□□□□ -0.26
Trim71-201ENSMUST00000111816 Ighv2-2A0A075B5P8 116 aa13.41□□□□□ -0.26
Trim71-201ENSMUST00000111816 P01821 116 aa13.41□□□□□ -0.26
Trim71-201ENSMUST00000111816 Fn1P11276 2477 aaKnown RBP13.41□□□□□ -0.26
Trim71-201ENSMUST00000111816 Gm21748Q3UE70 102 aa13.41□□□□□ -0.26
Trim71-201ENSMUST00000111816 Chchd10Q7TNL9 138 aa13.4□□□□□ -0.26
Trim71-201ENSMUST00000111816 A0A286YCN5 57 aa13.4□□□□□ -0.26
Trim71-201ENSMUST00000111816 Gm16485Q8C4B7 115 aa13.4□□□□□ -0.26
Trim71-201ENSMUST00000111816 Gm28230A0A0A0MQ91 144 aa13.4□□□□□ -0.27
Trim71-201ENSMUST00000111816 Wfdc11A2A5H7 82 aa13.39□□□□□ -0.27
Trim71-201ENSMUST00000111816 Cdc42se2Q8BGH7 84 aa13.39□□□□□ -0.27
Trim71-201ENSMUST00000111816 Gpha2Q925Q5 128 aa13.38□□□□□ -0.27
Trim71-201ENSMUST00000111816 Gm10135F6TEE5 83 aa13.38□□□□□ -0.27
Trim71-201ENSMUST00000111816 Polr2kQ63871 58 aa13.37□□□□□ -0.27
Trim71-201ENSMUST00000111816 Col4a5Q63ZW6 1691 aa13.36□□□□□ -0.27
Trim71-201ENSMUST00000111816 Gm10509O88255 85 aa13.36□□□□□ -0.27
Trim71-201ENSMUST00000111816 SetxA2AKX3 2646 aa13.36□□□□□ -0.27
Trim71-201ENSMUST00000111816 Cdc42se1Q8BHL7 80 aa13.35□□□□□ -0.27
Trim71-201ENSMUST00000111816 CstadQ9D245 104 aa13.35□□□□□ -0.27
Trim71-201ENSMUST00000111816 Gm20708H3BKF4 155 aa13.35□□□□□ -0.27
Trim71-201ENSMUST00000111816 Gm16223Q8CBM3 117 aa13.34□□□□□ -0.27
Trim71-201ENSMUST00000111816 PcntP48725 2898 aa13.34□□□□□ -0.27
Trim71-201ENSMUST00000111816 Gm10490F6VBM2 120 aa13.34□□□□□ -0.27
Trim71-201ENSMUST00000111816 Abca12E9Q876 2595 aa13.33□□□□□ -0.27
Trim71-201ENSMUST00000111816 Reg3aO09037 175 aa13.33□□□□□ -0.28
Trim71-201ENSMUST00000111816 4930519P11RikQ9CUJ8 166 aa13.33□□□□□ -0.28
Trim71-201ENSMUST00000111816 Pla2g2dQ9WVF6 144 aa13.33□□□□□ -0.28
Trim71-201ENSMUST00000111816 Hectd1Q69ZR2 2618 aaKnown RBP13.32□□□□□ -0.28
Trim71-201ENSMUST00000111816 Spink13Q3UTS8 97 aa13.32□□□□□ -0.28
Trim71-201ENSMUST00000111816 Crip3Q6Q6R3 243 aa13.31□□□□□ -0.28
Trim71-201ENSMUST00000111816 Cd164l2Q9D6W7 172 aa13.31□□□□□ -0.28
Trim71-201ENSMUST00000111816 Gm20661K7N787 53 aa13.31□□□□□ -0.28
Trim71-201ENSMUST00000111816 Gm17509Q9CZ61 145 aa13.31□□□□□ -0.28
Trim71-201ENSMUST00000111816 Gm43218A0A0G2JGT0 114 aa13.3□□□□□ -0.28
Trim71-201ENSMUST00000111816 Fhl2O70433 279 aa13.29□□□□□ -0.28
Trim71-201ENSMUST00000111816 PrlhG3UWC3 86 aa13.29□□□□□ -0.28
Trim71-201ENSMUST00000111816 Defb42Q8BVB5 75 aa13.28□□□□□ -0.28
Trim71-201ENSMUST00000111816 Mrpl34Q99N91 92 aa13.28□□□□□ -0.28
Trim71-201ENSMUST00000111816 2310034G01RikA0A286YDL3 209 aa13.28□□□□□ -0.28
Trim71-201ENSMUST00000111816 Zfand2aQ9JII7 171 aa13.28□□□□□ -0.28
Trim71-201ENSMUST00000111816 4930507D05RikQ8C9C9 103 aa13.27□□□□□ -0.29
Trim71-201ENSMUST00000111816 CicQ924A2 2510 aa13.26□□□□□ -0.29
Trim71-201ENSMUST00000111816 AI606181Q8C7B9 129 aa13.25□□□□□ -0.29
Trim71-201ENSMUST00000111816 Cox6a2P43023 97 aa13.24□□□□□ -0.29
Trim71-201ENSMUST00000111816 Uqcr11Q9CPX8 56 aa13.24□□□□□ -0.29
Trim71-201ENSMUST00000111816 Fam19a3Q7TPG6 132 aa13.23□□□□□ -0.29
Trim71-201ENSMUST00000111816 Rnase13Q5GAM7 153 aa13.23□□□□□ -0.29
Trim71-201ENSMUST00000111816 Prr13Q9CQJ5 137 aa13.22□□□□□ -0.29
Trim71-201ENSMUST00000111816 B230217C12RikE9Q3Z1 139 aa13.21□□□□□ -0.3
Trim71-201ENSMUST00000111816 Gm10226O88253 85 aa13.21□□□□□ -0.3
Trim71-201ENSMUST00000111816 Q8BGJ3 129 aa13.19□□□□□ -0.3
Trim71-201ENSMUST00000111816 6430550D23RikE9Q1X6 194 aa13.19□□□□□ -0.3
Trim71-201ENSMUST00000111816 Msrb1Q9JLC3 116 aa13.18□□□□□ -0.3
Trim71-201ENSMUST00000111816 Elof1P60003 83 aa13.18□□□□□ -0.3
Trim71-201ENSMUST00000111816 1600014C23RikQ9DAX4 101 aa13.18□□□□□ -0.3
Trim71-201ENSMUST00000111816 Gm28374F6SG70 93 aa13.17□□□□□ -0.3
Trim71-201ENSMUST00000111816 Defb50Q6TU36 73 aa13.17□□□□□ -0.3
Trim71-201ENSMUST00000111816 Krtap27-1E9PX37 202 aa13.17□□□□□ -0.3
Trim71-201ENSMUST00000111816 A930002H24RikQ8C8Y3 163 aa13.17□□□□□ -0.3
Trim71-201ENSMUST00000111816 Lmo4P61969 165 aa13.17□□□□□ -0.3
Trim71-201ENSMUST00000111816 E130116L18RikQ8BMV6 101 aa13.17□□□□□ -0.3
Trim71-201ENSMUST00000111816 Ighv8-13A0A075B5Y0 101 aa13.16□□□□□ -0.3
Trim71-201ENSMUST00000111816 Odf3l2Q3TZ65 277 aa13.16□□□□□ -0.3
Trim71-201ENSMUST00000111816 Gm10999F6Q4M4 69 aa13.15□□□□□ -0.3
Trim71-201ENSMUST00000111816 Gm9922Q8C3P1 144 aa13.15□□□□□ -0.3
Trim71-201ENSMUST00000111816 Q9DAA7 145 aa13.15□□□□□ -0.3
Trim71-201ENSMUST00000111816 Prol1E9PYQ4 312 aa13.15□□□□□ -0.31
Trim71-201ENSMUST00000111816 CrygaP04345 174 aa13.14□□□□□ -0.31
Trim71-201ENSMUST00000111816 Phxr4P15974 95 aa13.13□□□□□ -0.31
Trim71-201ENSMUST00000111816 Defb39Q70KL3 74 aa13.11□□□□□ -0.31
Trim71-201ENSMUST00000111816 Ly6g6cQ9Z1Q4 126 aa13.11□□□□□ -0.31
Trim71-201ENSMUST00000111816 Rtl10D3YWW5 146 aa13.09□□□□□ -0.31
Trim71-201ENSMUST00000111816 Prrc2cQ3TLH4 2846 aaKnown RBP13.09□□□□□ -0.31
Trim71-201ENSMUST00000111816 Coa5Q99M07 74 aa13.08□□□□□ -0.32
Trim71-201ENSMUST00000111816 Col4a6B1AVK5 1691 aa13.08□□□□□ -0.32
Trim71-201ENSMUST00000111816 Notch1Q01705 2531 aa13.08□□□□□ -0.32
Trim71-201ENSMUST00000111816 Pla2g2eQ9QUL3 142 aa13.07□□□□□ -0.32
Trim71-201ENSMUST00000111816 1700056E22RikF7CNM6 234 aa13.07□□□□□ -0.32
Trim71-201ENSMUST00000111816 Bahcc1Q3UHR0 2643 aa13.05□□□□□ -0.32
Trim71-201ENSMUST00000111816 AvpP35455 168 aa13.04□□□□□ -0.32
Trim71-201ENSMUST00000111816 Col27a1Q5QNQ9 1845 aa13.04□□□□□ -0.32
Trim71-201ENSMUST00000111816 CriptO70333 101 aa13.04□□□□□ -0.32
Trim71-201ENSMUST00000111816 Gm10308Q9CVR5 141 aa13.03□□□□□ -0.32
Trim71-201ENSMUST00000111816 Stab1Q8R4Y4 2571 aa13.01□□□□□ -0.33
Trim71-201ENSMUST00000111816 B430305J03RikQ8BQQ8 176 aa13□□□□□ -0.33
Trim71-201ENSMUST00000111816 Gm21886J3QJU9 214 aa12.99□□□□□ -0.33
Trim71-201ENSMUST00000111816 7530416G11RikJ3QJX6 159 aa12.99□□□□□ -0.33
Trim71-201ENSMUST00000111816 Dmac1Q9CQ00 111 aa12.99□□□□□ -0.33
Trim71-201ENSMUST00000111816 Pla2g10Q9QXX3 151 aa12.97□□□□□ -0.33
Trim71-201ENSMUST00000111816 Eif4ebp3Q80VV3 101 aa12.96□□□□□ -0.33
Trim71-201ENSMUST00000111816 D730001G18RikA0A087WQU7 115 aa12.95□□□□□ -0.34
Trim71-201ENSMUST00000111816 Col4a4Q9QZR9 1682 aa12.95□□□□□ -0.34
Trim71-201ENSMUST00000111816 Gm11627A6PWP4 55 aa12.93□□□□□ -0.34
Trim71-201ENSMUST00000111816 Gm10300Q8C8P7 189 aa12.93□□□□□ -0.34
Trim71-201ENSMUST00000111816 Gm9925F6T2U3 160 aa12.92□□□□□ -0.34
Trim71-201ENSMUST00000111816 1700018G05RikA0A1B0GSI2 66 aa12.89□□□□□ -0.35
Trim71-201ENSMUST00000111816 Phxr5P08399 672 aa12.89□□□□□ -0.35
Trim71-201ENSMUST00000111816 Gm26661M0QWV4 156 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms