RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Cdc42se2Q8BGH7 84 aa5.86□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Wfdc11A2A5H7 82 aa5.86□□□□□ -1.47
Scn8a-204ENSMUST00000108909 E130116L18RikQ8BMV6 101 aa5.86□□□□□ -1.47
Scn8a-204ENSMUST00000108909 B230217C12RikE9Q3Z1 139 aa5.85□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Rpl28P41105 137 aaKnown RBP5.85□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Prune2Q52KR3 3084 aa5.85□□□□□ -1.47
Scn8a-204ENSMUST00000108909 B430305J03RikQ8BQQ8 176 aa5.85□□□□□ -1.47
Scn8a-204ENSMUST00000108909 BC025920Q3US60 128 aa5.85□□□□□ -1.47
Scn8a-204ENSMUST00000108909 P84750 121 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 AvpP35455 168 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Gm10845Q3UNY9 185 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Igkv3-12A0A140T8P0 119 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Igkv8-21A0A140T8P7 120 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Smr3aQ61900 147 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Gm10570F6VB42 170 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Tcl1b5P56845 121 aa5.84□□□□□ -1.47
Scn8a-204ENSMUST00000108909 Ighv1-59A0A0A6YXE0 117 aa5.84□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Ly6c2P0CW03 131 aa5.84□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Fhl2O70433 279 aa5.83□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Sprr2jO70561 109 aa5.82□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gpha2Q925Q5 128 aa5.82□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm6899Q3USS0 134 aa5.82□□□□□ -1.48
Scn8a-204ENSMUST00000108909 NrgnP60761 78 aa5.82□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Spint4Q9D263 159 aa5.82□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm8439G3UWA7 96 aa5.81□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Rps28P62858 69 aaKnown RBP5.81□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm10300Q8C8P7 189 aa5.81□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm10549Q3URY4 149 aa5.81□□□□□ -1.48
Scn8a-204ENSMUST00000108909 A530084C06RikQ3UTW2 186 aa5.81□□□□□ -1.48
Scn8a-204ENSMUST00000108909 SbsponQ3UPR9 264 aa5.81□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm10226O88253 85 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Ly6gP35461 111 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Dmxl1Q6PNC0 3013 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Defb45Q3V490 66 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Znf580Q9DB38 172 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Hivep1Q03172 2688 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Obox2E9PXV9 151 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm10197F6QEY5 67 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 4930519P11RikQ9CUJ8 166 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Krtap27-1E9PX37 202 aa5.8□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Fam19a3Q7TPG6 132 aa5.79□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Chchd7Q8K2Q5 85 aa5.79□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Ovol3D3YYM0 189 aa5.79□□□□□ -1.48
Scn8a-204ENSMUST00000108909 1700056E22RikF7CNM6 234 aa5.79□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Wfdc15aQ8BH89 80 aa5.79□□□□□ -1.48
Scn8a-204ENSMUST00000108909 P01819 144 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 PlaurP35456 327 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Coa6Q8BGD8 79 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 CrygeQ03740 174 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 CrygfQ9CXV3 174 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Gm9573F7C950 1606 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 PscaP57096 123 aa5.78□□□□□ -1.48
Scn8a-204ENSMUST00000108909 Ntn5Q3UQ22 452 aa5.77□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Pla2g1bQ9Z0Y2 146 aa5.77□□□□□ -1.49
Scn8a-204ENSMUST00000108909 4930556J24RikQ9D4U7 146 aa5.77□□□□□ -1.49
Scn8a-204ENSMUST00000108909 6430550D23RikE9Q1X6 194 aa5.77□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Defb42Q8BVB5 75 aa5.76□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Igkv3-7A0A0G2JE31 119 aa5.76□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Krtap16-1A2A5X5 502 aa5.76□□□□□ -1.49
Scn8a-204ENSMUST00000108909 AI854703Q8BIN3 203 aa5.76□□□□□ -1.49
Scn8a-204ENSMUST00000108909 TrioQ0KL02 3102 aa5.76□□□□□ -1.49
Scn8a-204ENSMUST00000108909 FlncQ8VHX6 2726 aaKnown RBP5.75□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Bean1Q9EQG5 255 aa5.75□□□□□ -1.49
Scn8a-204ENSMUST00000108909 E130114P18RikF6S0S7 154 aa5.75□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Zfand2aQ9JII7 171 aa5.75□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Ranbp2Q9ERU9 3053 aaKnown RBP5.75□□□□□ -1.49
Scn8a-204ENSMUST00000108909 SycnQ8VCK7 134 aa5.75□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Wfdc6bF6ULY1 148 aa5.74□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Wfdc3Q14AE4 130 aa5.74□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Gm4707V9GXN5 68 aa5.74□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Ccdc179J3QM76 67 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 FrylF8VQ05 3007 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Chd7A2AJK6 2986 aaKnown RBP5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Igkv8-30A0A140T8M3 121 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Reg3aO09037 175 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Sostdc1Q9CQN4 206 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 P06329 120 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Odf3l2Q3TZ65 277 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Ighv1-56A0A0A6YXG2 117 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Zzef1Q5SSH7 2924 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Znf706Q9D115 76 aaKnown RBP5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 C130032M10RikQ8C888 123 aa5.73□□□□□ -1.49
Scn8a-204ENSMUST00000108909 3110070M22RikQ9DAQ7 118 aa5.72□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Igkv8-27A0A0G2JF28 120 aa5.72□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Gm5464Q3UY29 175 aa5.72□□□□□ -1.49
Scn8a-204ENSMUST00000108909 RetnlbQ99P86 105 aa5.72□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Q9DAB9 146 aa5.72□□□□□ -1.49
Scn8a-204ENSMUST00000108909 U90926O08546 118 aa5.72□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Ighv2-9-1A0A075B697 116 aa5.71□□□□□ -1.49
Scn8a-204ENSMUST00000108909 Defb37Q7TMD2 62 aa5.71□□□□□ -1.49
Scn8a-204ENSMUST00000108909 7530416G11RikJ3QJX6 159 aa5.71□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Ighv2-5A0A0A6YY69 116 aa5.71□□□□□ -1.5
Scn8a-204ENSMUST00000108909 2310034G01RikA0A286YDL3 209 aa5.71□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm9887F6RFI0 207 aa5.7□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm9922Q8C3P1 144 aa5.7□□□□□ -1.5
Scn8a-204ENSMUST00000108909 MgaA2AWL7 3003 aaKnown RBP5.69□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Q8K1L6 76 aa5.69□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Cd164l2Q9D6W7 172 aa5.69□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm28230A0A0A0MQ91 144 aa5.69□□□□□ -1.5
Scn8a-204ENSMUST00000108909 A930009A15RikG3UYI6 118 aa5.69□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms