RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Spint4Q9D263 159 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Defb50Q6TU36 73 aa10.74□□□□□ -0.69
Chd3-201ENSMUST00000092971 1700018G05RikA0A1B0GSI2 66 aa10.74□□□□□ -0.69
Chd3-201ENSMUST00000092971 Prol1E9PYQ4 312 aa10.73□□□□□ -0.69
Chd3-201ENSMUST00000092971 AplnQ9R0R4 77 aa10.73□□□□□ -0.69
Chd3-201ENSMUST00000092971 Gm10642Q3TWM1 71 aa10.73□□□□□ -0.69
Chd3-201ENSMUST00000092971 Defb45Q3V490 66 aa10.7□□□□□ -0.7
Chd3-201ENSMUST00000092971 Mrpl34Q99N91 92 aa10.7□□□□□ -0.7
Chd3-201ENSMUST00000092971 Ighv8-13A0A075B5Y0 101 aa10.68□□□□□ -0.7
Chd3-201ENSMUST00000092971 CnfnQ6PCW6 111 aa10.67□□□□□ -0.7
Chd3-201ENSMUST00000092971 Coa6Q8BGD8 79 aa10.67□□□□□ -0.7
Chd3-201ENSMUST00000092971 Csdc2Q91YQ3 154 aa10.67□□□□□ -0.7
Chd3-201ENSMUST00000092971 Gm10160F6Y577 67 aa10.66□□□□□ -0.7
Chd3-201ENSMUST00000092971 Ntn5Q3UQ22 452 aa10.66□□□□□ -0.7
Chd3-201ENSMUST00000092971 Fam19a3Q7TPG6 132 aa10.66□□□□□ -0.7
Chd3-201ENSMUST00000092971 A930002H24RikQ8C8Y3 163 aa10.65□□□□□ -0.7
Chd3-201ENSMUST00000092971 Flg2Q2VIS4 2362 aa10.65□□□□□ -0.7
Chd3-201ENSMUST00000092971 Piezo2Q8CD54 2822 aa10.64□□□□□ -0.71
Chd3-201ENSMUST00000092971 PolqQ8CGS6 2544 aa10.64□□□□□ -0.71
Chd3-201ENSMUST00000092971 Ighv2-5A0A0A6YY69 116 aa10.64□□□□□ -0.71
Chd3-201ENSMUST00000092971 Rtl10D3YWW5 146 aa10.64□□□□□ -0.71
Chd3-201ENSMUST00000092971 Gm20661K7N787 53 aa10.64□□□□□ -0.71
Chd3-201ENSMUST00000092971 4930518I15RikQ3V2W7 57 aa10.64□□□□□ -0.71
Chd3-201ENSMUST00000092971 Adamts20P59511 1906 aa10.63□□□□□ -0.71
Chd3-201ENSMUST00000092971 P01819 144 aa10.63□□□□□ -0.71
Chd3-201ENSMUST00000092971 Krtap27-1E9PX37 202 aa10.63□□□□□ -0.71
Chd3-201ENSMUST00000092971 Mp68P56379 58 aa10.63□□□□□ -0.71
Chd3-201ENSMUST00000092971 Odf3l2Q3TZ65 277 aa10.62□□□□□ -0.71
Chd3-201ENSMUST00000092971 Cox6a2P43023 97 aa10.62□□□□□ -0.71
Chd3-201ENSMUST00000092971 AI606181Q8C7B9 129 aa10.62□□□□□ -0.71
Chd3-201ENSMUST00000092971 Lrrk2Q5S006 2527 aa10.61□□□□□ -0.71
Chd3-201ENSMUST00000092971 Cdip1Q9DB75 208 aa10.61□□□□□ -0.71
Chd3-201ENSMUST00000092971 Gm10549Q3URY4 149 aa10.6□□□□□ -0.71
Chd3-201ENSMUST00000092971 RetnlbQ99P86 105 aa10.6□□□□□ -0.71
Chd3-201ENSMUST00000092971 Gm21886J3QJU9 214 aa10.59□□□□□ -0.71
Chd3-201ENSMUST00000092971 A530084C06RikQ3UTW2 186 aa10.58□□□□□ -0.72
Chd3-201ENSMUST00000092971 Rpl37aP61514 92 aa10.58□□□□□ -0.72
Chd3-201ENSMUST00000092971 Gm44790A0A0N4SV91 103 aa10.58□□□□□ -0.72
Chd3-201ENSMUST00000092971 Phxr5P08399 672 aa10.58□□□□□ -0.72
Chd3-201ENSMUST00000092971 Msrb1Q9JLC3 116 aa10.57□□□□□ -0.72
Chd3-201ENSMUST00000092971 Spaca4Q80ZQ0 127 aa10.56□□□□□ -0.72
Chd3-201ENSMUST00000092971 B430305J03RikQ8BQQ8 176 aa10.55□□□□□ -0.72
Chd3-201ENSMUST00000092971 PtprbB2RU80 1998 aa10.55□□□□□ -0.72
Chd3-201ENSMUST00000092971 Igkv8-27A0A0G2JF28 120 aa10.54□□□□□ -0.72
Chd3-201ENSMUST00000092971 Srsf12Q8C8K3 266 aa10.53□□□□□ -0.72
Chd3-201ENSMUST00000092971 Kiaa1549Q68FD9 1940 aa10.53□□□□□ -0.72
Chd3-201ENSMUST00000092971 BC025920Q3US60 128 aa10.53□□□□□ -0.72
Chd3-201ENSMUST00000092971 Gpr15lA0A0B4J1N3 78 aa10.53□□□□□ -0.72
Chd3-201ENSMUST00000092971 2310034G01RikA0A286YDL3 209 aa10.52□□□□□ -0.72
Chd3-201ENSMUST00000092971 Ankhd1E9PUR0 2548 aaKnown RBP10.52□□□□□ -0.73
Chd3-201ENSMUST00000092971 Phf5aP83870 110 aaKnown RBP10.51□□□□□ -0.73
Chd3-201ENSMUST00000092971 Gm5464Q3UY29 175 aa10.51□□□□□ -0.73
Chd3-201ENSMUST00000092971 Prr9Q8BV84 116 aa10.51□□□□□ -0.73
Chd3-201ENSMUST00000092971 Sptbn4E9PX29 2561 aa10.5□□□□□ -0.73
Chd3-201ENSMUST00000092971 Tln1P26039 2541 aaKnown RBP10.5□□□□□ -0.73
Chd3-201ENSMUST00000092971 Gm3250E9Q1M3 230 aa10.49□□□□□ -0.73
Chd3-201ENSMUST00000092971 Gm9903Q8C9Y8 129 aa10.47□□□□□ -0.73
Chd3-201ENSMUST00000092971 Chd8Q09XV5 2582 aaKnown RBP10.46□□□□□ -0.73
Chd3-201ENSMUST00000092971 Q8BGJ3 129 aa10.46□□□□□ -0.73
Chd3-201ENSMUST00000092971 Znf414Q9DCK4 299 aa10.46□□□□□ -0.74
Chd3-201ENSMUST00000092971 Gm5617Q91VN2 117 aa10.45□□□□□ -0.74
Chd3-201ENSMUST00000092971 AI854703Q8BIN3 203 aa10.45□□□□□ -0.74
Chd3-201ENSMUST00000092971 7530416G11RikJ3QJX6 159 aa10.45□□□□□ -0.74
Chd3-201ENSMUST00000092971 Q9DAB9 146 aa10.45□□□□□ -0.74
Chd3-201ENSMUST00000092971 Crip3Q6Q6R3 243 aa10.44□□□□□ -0.74
Chd3-201ENSMUST00000092971 Gm10770F7D043 238 aa10.41□□□□□ -0.74
Chd3-201ENSMUST00000092971 Gm3285A0A1W2P7U0 201 aa10.41□□□□□ -0.74
Chd3-201ENSMUST00000092971 Zfp462B1AWL2 2495 aaKnown RBP10.4□□□□□ -0.75
Chd3-201ENSMUST00000092971 3110070M22RikQ9DAQ7 118 aa10.4□□□□□ -0.75
Chd3-201ENSMUST00000092971 Gm17689B3GLJ4 109 aa10.38□□□□□ -0.75
Chd3-201ENSMUST00000092971 Rnase13Q5GAM7 153 aa10.38□□□□□ -0.75
Chd3-201ENSMUST00000092971 Dmac1Q9CQ00 111 aa10.38□□□□□ -0.75
Chd3-201ENSMUST00000092971 4930507D05RikQ8C9C9 103 aa10.37□□□□□ -0.75
Chd3-201ENSMUST00000092971 Usp9xP70398 2559 aaKnown RBP10.35□□□□□ -0.75
Chd3-201ENSMUST00000092971 Elof1P60003 83 aa10.35□□□□□ -0.75
Chd3-201ENSMUST00000092971 Limd2Q8BGB5 128 aa10.34□□□□□ -0.75
Chd3-201ENSMUST00000092971 E130208F15RikQ3UPV3 143 aa10.33□□□□□ -0.76
Chd3-201ENSMUST00000092971 Fam168bQ80XQ8 194 aa10.33□□□□□ -0.76
Chd3-201ENSMUST00000092971 Cdc42se1Q8BHL7 80 aa10.33□□□□□ -0.76
Chd3-201ENSMUST00000092971 Hcfc1Q61191 2045 aaKnown RBP10.33□□□□□ -0.76
Chd3-201ENSMUST00000092971 Snhg11Q4G0K9 87 aa10.33□□□□□ -0.76
Chd3-201ENSMUST00000092971 Gm11627A6PWP4 55 aa10.32□□□□□ -0.76
Chd3-201ENSMUST00000092971 Q8BT88 171 aa10.32□□□□□ -0.76
Chd3-201ENSMUST00000092971 CrygaP04345 174 aa10.32□□□□□ -0.76
Chd3-201ENSMUST00000092971 Krtap16-1A2A5X5 502 aa10.31□□□□□ -0.76
Chd3-201ENSMUST00000092971 Piezo1E2JF22 2547 aa10.31□□□□□ -0.76
Chd3-201ENSMUST00000092971 Gm26661M0QWV4 156 aa10.3□□□□□ -0.76
Chd3-201ENSMUST00000092971 Lrp4Q8VI56 1905 aa10.3□□□□□ -0.76
Chd3-201ENSMUST00000092971 MobpQ9D2P8 170 aa10.29□□□□□ -0.76
Chd3-201ENSMUST00000092971 Gm10837Q3UTT8 145 aa10.29□□□□□ -0.76
Chd3-201ENSMUST00000092971 Coa5Q99M07 74 aa10.28□□□□□ -0.76
Chd3-201ENSMUST00000092971 Gm16181B0V2H2 73 aa10.28□□□□□ -0.76
Chd3-201ENSMUST00000092971 Defb11Q8R2I7 77 aa10.27□□□□□ -0.76
Chd3-201ENSMUST00000092971 Tns1E9Q0S6 1888 aaKnown RBP10.26□□□□□ -0.77
Chd3-201ENSMUST00000092971 Prr13Q9CQJ5 137 aa10.25□□□□□ -0.77
Chd3-201ENSMUST00000092971 Ighv2-2A0A075B5P8 116 aa10.25□□□□□ -0.77
Chd3-201ENSMUST00000092971 P01821 116 aa10.25□□□□□ -0.77
Chd3-201ENSMUST00000092971 Gm27235Q3UW50 83 aa10.24□□□□□ -0.77
Chd3-201ENSMUST00000092971 Pla2g10Q9QXX3 151 aa10.24□□□□□ -0.77
Chd3-201ENSMUST00000092971 Smr3aQ61900 147 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 77.6 ms