RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 PscaP57096 123 aa13□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Ntn5Q3UQ22 452 aa13□□□□□ -0.33
Ebf3-201ENSMUST00000033378 CrygeQ03740 174 aa12.99□□□□□ -0.33
Ebf3-201ENSMUST00000033378 H2al1aQ5M8Q2 105 aa12.99□□□□□ -0.33
Ebf3-201ENSMUST00000033378 H2al1eQ810S6 105 aa12.99□□□□□ -0.33
Ebf3-201ENSMUST00000033378 AI854703Q8BIN3 203 aa12.99□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Zfp292Q9Z2U2 2698 aa12.98□□□□□ -0.33
Ebf3-201ENSMUST00000033378 U90926O08546 118 aa12.98□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Csdc2Q91YQ3 154 aa12.97□□□□□ -0.33
Ebf3-201ENSMUST00000033378 4930518I15RikQ3V2W7 57 aa12.96□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Defb38Q7TNV7 63 aa12.96□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Bri3P28662 125 aa12.96□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Gm10267M0QWD8 85 aa12.95□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Prr13Q9CQJ5 137 aa12.95□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Gm17509Q9CZ61 145 aa12.95□□□□□ -0.34
Ebf3-201ENSMUST00000033378 CrygaP04345 174 aa12.95□□□□□ -0.34
Ebf3-201ENSMUST00000033378 1700074P13RikQ9D9G7 251 aa12.94□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Ndufb1P0DN34 57 aa12.94□□□□□ -0.34
Ebf3-201ENSMUST00000033378 FshbQ60687 130 aa12.94□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Unc79Q0KK59 2596 aa12.94□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Usp9yF8VPU6 2556 aa12.92□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Ighv2-9A0A075B5Q5 116 aa12.91□□□□□ -0.34
Ebf3-201ENSMUST00000033378 MobpQ9D2P8 170 aa12.91□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Cd164Q9R0L9 197 aa12.9□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Gm10570F6VB42 170 aa12.9□□□□□ -0.34
Ebf3-201ENSMUST00000033378 Igkv8-21A0A140T8P7 120 aa12.9□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Defb37Q7TMD2 62 aa12.89□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Q8K1L6 76 aa12.88□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Ighv8-13A0A075B5Y0 101 aa12.88□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Sec61gP60060 68 aa12.87□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Nupr2Q497P3 102 aa12.87□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Nbeal1E9PYP2 2688 aa12.87□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Srsf12Q8C8K3 266 aa12.86□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Ccdc179J3QM76 67 aa12.86□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Gm43218A0A0G2JGT0 114 aa12.85□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Cep192E9Q4Y4 2514 aaKnown RBP12.85□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Fam19a3Q7TPG6 132 aa12.84□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Coa6Q8BGD8 79 aa12.84□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Col4a2P08122 1707 aa12.83□□□□□ -0.35
Ebf3-201ENSMUST00000033378 Rps28P62858 69 aaKnown RBP12.83□□□□□ -0.36
Ebf3-201ENSMUST00000033378 P01819 144 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Ighv2-5A0A0A6YY69 116 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Krtap16-1A2A5X5 502 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Gm16485Q8C4B7 115 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Q9DAA7 145 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Msrb1Q9JLC3 116 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Krtap26-1Q9D7N2 215 aa12.82□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Igkv8-27A0A0G2JF28 120 aa12.81□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Igkv8-30A0A140T8M3 121 aa12.81□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Prune2Q52KR3 3084 aa12.81□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Eif4ebp3Q80VV3 101 aa12.79□□□□□ -0.36
Ebf3-201ENSMUST00000033378 4930519P11RikQ9CUJ8 166 aa12.79□□□□□ -0.36
Ebf3-201ENSMUST00000033378 P84750 121 aa12.79□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Gm10197F6QEY5 67 aa12.78□□□□□ -0.36
Ebf3-201ENSMUST00000033378 C130032M10RikQ8C888 123 aa12.78□□□□□ -0.36
Ebf3-201ENSMUST00000033378 Spint4Q9D263 159 aa12.77□□□□□ -0.37
Ebf3-201ENSMUST00000033378 A730009L09RikA0A1B0GS82 72 aa12.76□□□□□ -0.37
Ebf3-201ENSMUST00000033378 7530416G11RikJ3QJX6 159 aa12.76□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Jbts17Q8CE72 3214 aa12.75□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Igkv3-12A0A140T8P0 119 aa12.75□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Cox6a2P43023 97 aa12.75□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Reg3aO09037 175 aa12.74□□□□□ -0.37
Ebf3-201ENSMUST00000033378 6430550D23RikE9Q1X6 194 aa12.74□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Lama3Q61789 3330 aa12.73□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Mrpl34Q99N91 92 aa12.73□□□□□ -0.37
Ebf3-201ENSMUST00000033378 A530084C06RikQ3UTW2 186 aa12.72□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Znf706Q9D115 76 aaKnown RBP12.72□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Gm28230A0A0A0MQ91 144 aa12.72□□□□□ -0.37
Ebf3-201ENSMUST00000033378 H2al1kJ3QP08 105 aa12.72□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Prrc2cQ3TLH4 2846 aaKnown RBP12.71□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Ighv2-2A0A075B5P8 116 aa12.71□□□□□ -0.37
Ebf3-201ENSMUST00000033378 P01821 116 aa12.71□□□□□ -0.37
Ebf3-201ENSMUST00000033378 Gm9903Q8C9Y8 129 aa12.69□□□□□ -0.38
Ebf3-201ENSMUST00000033378 Gm10772F7AIG4 85 aa12.68□□□□□ -0.38
Ebf3-201ENSMUST00000033378 2310034G01RikA0A286YDL3 209 aa12.67□□□□□ -0.38
Ebf3-201ENSMUST00000033378 Mki67E9PVX6 3177 aaKnown RBP12.66□□□□□ -0.38
Ebf3-201ENSMUST00000033378 Gm26661M0QWV4 156 aa12.65□□□□□ -0.38
Ebf3-201ENSMUST00000033378 Gm10308Q9CVR5 141 aa12.65□□□□□ -0.38
Ebf3-201ENSMUST00000033378 Elof1P60003 83 aa12.64□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Wfdc3Q14AE4 130 aa12.64□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Lama2Q60675 3118 aaKnown RBP12.64□□□□□ -0.39
Ebf3-201ENSMUST00000033378 1700018G05RikA0A1B0GSI2 66 aa12.63□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Gm21886J3QJU9 214 aa12.63□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Gm4707V9GXN5 68 aa12.63□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Gm17689B3GLJ4 109 aa12.62□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Gcn1E9PVA8 2671 aaKnown RBP12.61□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Gm44790A0A0N4SV91 103 aa12.61□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Gm10770F7D043 238 aa12.6□□□□□ -0.39
Ebf3-201ENSMUST00000033378 Adm2Q7TNK8 150 aa12.57□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Bean1Q9EQG5 255 aa12.55□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Cfap54Q8C6S9 3106 aa12.55□□□□□ -0.4
Ebf3-201ENSMUST00000033378 E130208F15RikQ3UPV3 143 aa12.54□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Defb50Q6TU36 73 aa12.54□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Dmac1Q9CQ00 111 aa12.54□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Gm10160F6Y577 67 aa12.54□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Psors1c2Q80ZC9 134 aa12.53□□□□□ -0.4
Ebf3-201ENSMUST00000033378 H2al1mQ9DAD9 105 aa12.53□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Gm11627A6PWP4 55 aa12.53□□□□□ -0.4
Ebf3-201ENSMUST00000033378 Wfdc6bF6ULY1 148 aa12.52□□□□□ -0.41
Ebf3-201ENSMUST00000033378 CicQ924A2 2510 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms