RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Cdc42se2Q8BGH7 84 aa8.93□□□□□ -0.98
Pcdhac1-201ENSMUST00000007584 Pcnx3Q8VI59 2028 aa8.91□□□□□ -0.98
Pcdhac1-201ENSMUST00000007584 Ovol3D3YYM0 189 aa8.91□□□□□ -0.98
Pcdhac1-201ENSMUST00000007584 SbsponQ3UPR9 264 aa8.91□□□□□ -0.98
Pcdhac1-201ENSMUST00000007584 Ly6gP35461 111 aa8.89□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Tcf20Q9EPQ8 1987 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 PrlhG3UWC3 86 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 CrygeQ03740 174 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 CrygfQ9CXV3 174 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Hivep2Q3UHF7 2430 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Gm10300Q8C8P7 189 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Gm10549Q3URY4 149 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Col5a3Q9JLI2 1739 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Pcdh15Q99PJ1 1943 aa8.88□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Pla2g2dQ9WVF6 144 aa8.87□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Abca2P41234 2434 aa8.87□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 B430305J03RikQ8BQQ8 176 aa8.87□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 4930556J24RikQ9D4U7 146 aa8.87□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Gm9913Q8BQQ2 135 aa8.86□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Prr14lE9Q7C4 1971 aa8.86□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Ighv1-59A0A0A6YXE0 117 aa8.86□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Tet2Q4JK59 1912 aaKnown RBP8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Wisp2Q9Z0G4 251 aa8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 OtoglF7A4A7 2325 aa8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Krtap16-1A2A5X5 502 aa8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Rtl10D3YWW5 146 aa8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Gm10509O88255 85 aa8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Igkv8-30A0A140T8M3 121 aa8.85□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Pkd1l2Q7TN88 2461 aa8.84□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Igkv3-7A0A0G2JE31 119 aa8.84□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Ccdc179J3QM76 67 aa8.84□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 C130032M10RikQ8C888 123 aa8.84□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 E130116L18RikQ8BMV6 101 aa8.84□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Sostdc1Q9CQN4 206 aa8.84□□□□□ -0.99
Pcdhac1-201ENSMUST00000007584 Lmo4P61969 165 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Vwa8Q8CC88 1905 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Nsun4C4P6S0 806 aaKnown RBP8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Fam19a3Q7TPG6 132 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Gpha2Q925Q5 128 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Wfdc6bF6ULY1 148 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Shisa2Q8QZV2 295 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 MgamB5THE2 1827 aa8.83□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Fhl2O70433 279 aa8.82□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Rai1Q61818 1889 aa8.82□□□□□ -1
Pcdhac1-201ENSMUST00000007584 6430550D23RikE9Q1X6 194 aa8.82□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Col24a1Q30D77 1733 aa8.82□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Znf580Q9DB38 172 aa8.81□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Chchd7Q8K2Q5 85 aa8.81□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Myo9aQ8C170 2542 aa8.81□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Wfdc3Q14AE4 130 aa8.81□□□□□ -1
Pcdhac1-201ENSMUST00000007584 PscaP57096 123 aa8.8□□□□□ -1
Pcdhac1-201ENSMUST00000007584 P06329 120 aa8.8□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Wfdc15aQ8BH89 80 aa8.8□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Gm4707V9GXN5 68 aa8.8□□□□□ -1
Pcdhac1-201ENSMUST00000007584 B230217C12RikE9Q3Z1 139 aa8.8□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Notch2O35516 2470 aa8.8□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Gm10226O88253 85 aa8.79□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Defb45Q3V490 66 aa8.79□□□□□ -1
Pcdhac1-201ENSMUST00000007584 U90926O08546 118 aa8.79□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Q8K1L6 76 aa8.79□□□□□ -1
Pcdhac1-201ENSMUST00000007584 SycnQ8VCK7 134 aa8.79□□□□□ -1
Pcdhac1-201ENSMUST00000007584 AI854703Q8BIN3 203 aa8.79□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Ttc28Q80XJ3 2450 aa8.78□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Ly6c2P0CW03 131 aa8.78□□□□□ -1
Pcdhac1-201ENSMUST00000007584 Ighv1-56A0A0A6YXG2 117 aa8.77□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 2310034G01RikA0A286YDL3 209 aa8.77□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Ighv2-9-1A0A075B697 116 aa8.77□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Defb18Q30KP5 85 aa8.77□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 BC025920Q3US60 128 aa8.75□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Reg3aO09037 175 aa8.75□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Gm10160F6Y577 67 aa8.75□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 7530416G11RikJ3QJX6 159 aa8.75□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Pla2g1bQ9Z0Y2 146 aa8.74□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Krtap27-1E9PX37 202 aa8.73□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 1700056E22RikF7CNM6 234 aa8.73□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Wfdc17Q5SSJ1 76 aa8.73□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Defb42Q8BVB5 75 aa8.73□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Znf706Q9D115 76 aaKnown RBP8.72□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Hcfc1Q61191 2045 aaKnown RBP8.72□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Kif26aQ52KG5 1881 aa8.71□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Wfdc11A2A5H7 82 aa8.71□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Odf3l2Q3TZ65 277 aa8.71□□□□□ -1.01
Pcdhac1-201ENSMUST00000007584 Pip4p1Q3TWL2 284 aa8.71□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Nup210Q9QY81 1886 aaKnown RBP8.7□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Ighv2-5A0A0A6YY69 116 aa8.7□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Defb37Q7TMD2 62 aa8.7□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Ankhd1E9PUR0 2548 aaKnown RBP8.7□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Mrpl34Q99N91 92 aa8.69□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Zfand2aQ9JII7 171 aa8.69□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Gm28230A0A0A0MQ91 144 aa8.69□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 E130114P18RikF6S0S7 154 aa8.69□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 3110070M22RikQ9DAQ7 118 aa8.69□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Gm12216A0A1W2P827 62 aa8.69□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Gm9922Q8C3P1 144 aa8.68□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Col4a6B1AVK5 1691 aa8.67□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 A730009L09RikA0A1B0GS82 72 aa8.67□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Limd2Q8BGB5 128 aa8.67□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Adamts20P59511 1906 aa8.66□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Q9DAA7 145 aa8.66□□□□□ -1.02
Pcdhac1-201ENSMUST00000007584 Cd164l2Q9D6W7 172 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 86.9 ms