RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Trav12-3A0A075B648 115 aa12.51□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Ighv2-9-1A0A075B697 116 aa12.51□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Gm11213A0A1B0GR83 88 aa12.51□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Cib3Q0P523 160 aa12.51□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Ifitm10Q8BR26 201 aa12.51□□□□□ -0.41
Scn1b-203ENSMUST00000211945 RetnlaQ9EP95 111 aa12.51□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Gm45521A0A1B0GRK0 198 aa12.5□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Aqp7O54794 303 aa12.5□□□□□ -0.41
Scn1b-203ENSMUST00000211945 TcraP01849 138 aa12.5□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Dnah2P0C6F1 4456 aa12.5□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Defa15P50713 93 aa12.49□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Sprr1bQ62267 153 aa12.49□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Tomm6Q9CQN3 74 aa12.49□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Ighv1-61P01749 117 aa12.48□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Rab24P35290 203 aa12.48□□□□□ -0.41
Scn1b-203ENSMUST00000211945 BC106179Q8C9L1 186 aa12.48□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Chac1Q8R3J5 223 aa12.48□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Ighv13-2A0A0A6YWN3 119 aa12.47□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Trdv2-1A0A0G2JGB9 116 aa12.47□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Prh1P05142 261 aa12.47□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Tmem170bP86050 132 aa12.47□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Gm10130F6ZHM5 101 aa12.47□□□□□ -0.41
Scn1b-203ENSMUST00000211945 P18527 97 aa12.47□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Pkd1O08852 4293 aa12.46□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Gm10542F6XDR3 90 aa12.46□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Prp2P05143 317 aa12.46□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Vamp3P63024 103 aa12.46□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Ankrd39Q9D2X0 183 aa12.46□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Psmb2Q9R1P3 201 aa12.46□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Scgb1b11A0A087WQJ0 93 aa12.45□□□□□ -0.42
Scn1b-203ENSMUST00000211945 P01794 123 aa12.45□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Ndufv3Q8BK30 104 aaKnown RBP12.45□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Sec11aQ9R0P6 179 aa12.45□□□□□ -0.42
Scn1b-203ENSMUST00000211945 U90926O08546 118 aa12.44□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Igkv2-137A0A0B4J1H6 120 aa12.43□□□□□ -0.42
Scn1b-203ENSMUST00000211945 SeboxP70368 190 aa12.43□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Nupr2Q497P3 102 aa12.42□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Gm1553Q66VB7 94 aa12.42□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Trav9n-4A0A075B631 113 aa12.42□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Tmem238A9JSM3 176 aa12.42□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Ovol2Q8CIV7 274 aa12.42□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Josd1Q9DBJ6 202 aa12.4□□□□□ -0.42
Scn1b-203ENSMUST00000211945 Tcrg-V4A0A0B4J1J8 138 aa12.38□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Esp24A8R0V6 68 aa12.38□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Krtap10-4Q08EG8 221 aa12.38□□□□□ -0.43
Scn1b-203ENSMUST00000211945 H2al1nQ497L1 109 aa12.38□□□□□ -0.43
Scn1b-203ENSMUST00000211945 4930556J24RikQ9D4U7 146 aa12.38□□□□□ -0.43
Scn1b-203ENSMUST00000211945 SpinklQ8CEK3 90 aa12.37□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Mpv17l2Q8VIK2 200 aa12.37□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Trav13d-4A0A0G2JFX3 110 aa12.37□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Ndufa12Q7TMF3 145 aaKnown RBP12.37□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Defa1P11477 93 aa12.36□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Fgf6P21658 208 aa12.36□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Ss18l2Q9D174 77 aa12.36□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Fam213bQ9DB60 201 aa12.36□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Defb40Q70KL2 73 aa12.35□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Q9D727 114 aa12.35□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Trav13-4-dv7A0A075B6C2 110 aa12.34□□□□□ -0.43
Scn1b-203ENSMUST00000211945 LeprotO89013 131 aa12.34□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Cox8bP48772 70 aa12.34□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Znf664Q4VA44 261 aa12.34□□□□□ -0.43
Scn1b-203ENSMUST00000211945 Ighv2-9A0A075B5Q5 116 aa12.33□□□□□ -0.44
Scn1b-203ENSMUST00000211945 SpxD3Z752 116 aa12.33□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Ndufa1O35683 70 aa12.33□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Defa16P50714 93 aa12.33□□□□□ -0.44
Scn1b-203ENSMUST00000211945 CnbpP53996 178 aaKnown RBP12.33□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Cited4Q9WUL8 182 aa12.33□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Igkv3-12A0A140T8P0 119 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Wfdc21Q8BTE6 63 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 9430069I07RikQ9CX21 111 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Fndc10A2A9Q0 223 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Gm28374F6SG70 93 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 P01896 185 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Bsph2Q0Q236 131 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Gatd1Q8BFQ8 220 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Mfap4Q9D1H9 257 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Plac8Q9JI48 112 aa12.32□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Ighv1-62-1A0A075B5U3 116 aa12.31□□□□□ -0.44
Scn1b-203ENSMUST00000211945 BaalcQ8VHV1 145 aa12.31□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Srsf9Q9D0B0 222 aaKnown RBP12.31□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Zfand2aQ9JII7 171 aa12.31□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Gm45717A0A1B0GT68 152 aa12.29□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Trav11A0A0B4J1J9 114 aa12.28□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Tmem97Q8VD00 176 aa12.28□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Slc25a2Q99ML6 265 aa12.28□□□□□ -0.44
Scn1b-203ENSMUST00000211945 Gm20458E9PXJ7 78 aa12.27□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Gm9376G3UW68 176 aa12.27□□□□□ -0.45
Scn1b-203ENSMUST00000211945 PscaP57096 123 aa12.27□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Hspb8Q9JK92 196 aa12.27□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Dync1h1Q9JHU4 4644 aaKnown RBP12.26□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Gm28305F6U473 122 aa12.26□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Grcc10O35127 126 aa12.26□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Rbm7Q9CQT2 265 aaKnown RBP12.26□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Fgf23Q9EPC2 251 aa12.26□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Dnah5Q8VHE6 4621 aa12.25□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Gm4064A0A087WR82 380 aa12.25□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Ighv1-56A0A0A6YXG2 117 aa12.25□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Igkv4-92A0A0B4J1I2 117 aa12.25□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Gm10352B2RWR6 380 aa12.25□□□□□ -0.45
Scn1b-203ENSMUST00000211945 Rbmy1a1O35698 380 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 338 ms