RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Slc25a20Q9Z2Z6 301 aaKnown RBP5.96□□□□□ -1.46
Trim39-205ENSMUST00000173369 Trdv5A0A075B661 115 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Wdr38Q9D994 303 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Klk11Q9QYN3 276 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ighv1-15A0A0A6YXA5 117 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 P06328 117 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 AamdcQ8R0P4 122 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Q9D8L0 127 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 C1qcQ02105 246 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Q3UNZ8 350 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Bsph1Q3UW26 133 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Chac1Q8R3J5 223 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Mustn1Q99JI1 82 aa5.95□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ighv8-5A0A0A6YY60 119 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm11213A0A1B0GR83 88 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Tomm6Q9CQN3 74 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Trav7n-4A0A075B620 113 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ighv2-6A0A075B6A7 116 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 4930447F04RikA2AFR2 126 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm10490F6VBM2 120 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 P01745 121 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Tex26Q0VB26 296 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Defa23Q5G866 93 aa5.94□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm15056F6ZR08 88 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm5426J3QNM7 103 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 OxtP35454 125 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ube2d3P61079 147 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ube2d2P62838 147 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 4930518I15RikQ3V2W7 57 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Hcfc2Q9D968 241 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm33815A0A087WNV3 176 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 S100a4P07091 101 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 P84751 237 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm11733Q8BQP1 125 aa5.93□□□□□ -1.46
Trim39-205ENSMUST00000173369 Trav19A0A0B4J1K4 119 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Prss29Q99MS4 279 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Mrpl36Q99N90 102 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Srsf9Q9D0B0 222 aaKnown RBP5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 B230217C12RikE9Q3Z1 139 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Mrpl53Q9D1H8 118 aaKnown RBP5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Igkv4-74A0A0B4J1I3 119 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 CtsgP28293 261 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm12888Q3UW77 119 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gkn1Q9CR36 201 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Tmem263Q9DAM7 115 aa5.92□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ighv1-61P01749 117 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 9130213A22RikQ3V3T2 120 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ndufa3Q9CQ91 84 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 PmvkQ9D1G2 192 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Crip2Q9DCT8 208 aaKnown RBP5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Plekhb2Q9QZC7 221 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Ighv1-63A0A075B5X2 117 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm4064A0A087WR82 380 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 B230359F08RikA0A0B4J1K3 109 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Igkv4-54A0A0G2JES9 117 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm10352B2RWR6 380 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm20726G3UX18 150 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm21693J3QK27 380 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Rbmy1a1O35698 380 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Cd24P24807 76 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Cox7a1P56392 80 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Dad1P61804 113 aa5.91□□□□□ -1.46
Trim39-205ENSMUST00000173369 Hbb-bsA8DUK4 147 aa5.9□□□□□ -1.46
Trim39-205ENSMUST00000173369 Hbb-b1P02088 147 aa5.9□□□□□ -1.46
Trim39-205ENSMUST00000173369 Tmed6Q9CQG0 239 aa5.9□□□□□ -1.46
Trim39-205ENSMUST00000173369 Gm11011D3Z3L9 86 aa5.9□□□□□ -1.47
Trim39-205ENSMUST00000173369 P01793 123 aa5.9□□□□□ -1.47
Trim39-205ENSMUST00000173369 1700008P02RikQ9DAJ8 175 aa5.9□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ndufs7Q9DC70 224 aa5.9□□□□□ -1.47
Trim39-205ENSMUST00000173369 Dnah3Q8BW94 4083 aa5.89□□□□□ -1.47
Trim39-205ENSMUST00000173369 Gm9513B3GLJ6 99 aa5.89□□□□□ -1.47
Trim39-205ENSMUST00000173369 TtrP07309 147 aa5.89□□□□□ -1.47
Trim39-205ENSMUST00000173369 Gm11020F6ZGD5 61 aa5.89□□□□□ -1.47
Trim39-205ENSMUST00000173369 TshbP12656 138 aa5.89□□□□□ -1.47
Trim39-205ENSMUST00000173369 2310009B15RikA0A0A6YWI4 143 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Cacng7P62956 275 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Gm26938S4R185 226 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ighv3-3A0A0A6YWL2 116 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Krtap10-10A0A1W2P7T6 217 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Fam240aJ3QNP9 97 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 4930432M17RikQ3V0W9 174 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Q99M08 65 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Trav9d-3A0A075B695 113 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Lamtor3O88653 124 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ppp1r32Q148A4 427 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 1500011B03RikQ3TTH7 73 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 RhohQ9D3G9 191 aa5.88□□□□□ -1.47
Trim39-205ENSMUST00000173369 D130052B06RikQ3UW13 202 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Dph3Q8K0W9 82 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Atp5lQ9CPQ8 103 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Trav4d-3A0A075B625 110 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Ighv13-2A0A0A6YWN3 119 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Csn3P06796 181 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Pex7P97865 318 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 9430069I07RikQ9CX21 111 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Them7Q9DCP4 223 aa5.87□□□□□ -1.47
Trim39-205ENSMUST00000173369 Trav14-3A0A075B607 120 aa5.86□□□□□ -1.47
Trim39-205ENSMUST00000173369 Gm10160F6Y577 67 aa5.86□□□□□ -1.47
Trim39-205ENSMUST00000173369 Mrps12O35680 139 aa5.86□□□□□ -1.47
Trim39-205ENSMUST00000173369 Zfp951A0A087WRH0 451 aa5.86□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms