RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Vps13dB1ART2 4390 aa20.27■□□□□ 0.84
Ctdnep1-201ENSMUST00000108593 4930546C10RikE9Q4Y3 121 aa20.27■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Gm11444F6QMA6 170 aa20.27■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Dnah11E9Q7N9 4488 aa20.26■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 3110070M22RikQ9DAQ7 118 aa20.26■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Ighv1-61P01749 117 aa20.25■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Prss29Q99MS4 279 aa20.25■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Ryr3A2AGL3 4863 aa20.25■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Gm11213A0A1B0GR83 88 aa20.24■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Ighv2-9-1A0A075B697 116 aa20.24■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Ube2d1P61080 147 aaKnown RBP20.24■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 TcraP01849 138 aa20.23■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Krtap10-4Q08EG8 221 aa20.23■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Trdv2-1A0A0G2JGB9 116 aa20.22■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 SeboxP70368 190 aa20.21■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Tmem170bP86050 132 aa20.21■□□□□ 0.83
Ctdnep1-201ENSMUST00000108593 Gm45521A0A1B0GRK0 198 aa20.2■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Gm28374F6SG70 93 aa20.2■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Vamp3P63024 103 aa20.2■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Cib3Q0P523 160 aa20.2■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Gm10542F6XDR3 90 aa20.19■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Gm5617Q91VN2 117 aa20.19■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Wfdc21Q8BTE6 63 aa20.18■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Aqp7O54794 303 aa20.17■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Gm10130F6ZHM5 101 aa20.16■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Rab24P35290 203 aa20.16■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Trav9n-4A0A075B631 113 aa20.16■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Sec11aQ9R0P6 179 aa20.16■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Ctxnd2A0A1B0GQX3 59 aa20.15■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Ndufv3Q8BK30 104 aaKnown RBP20.15■□□□□ 0.82
Ctdnep1-201ENSMUST00000108593 Ryr2E9Q401 4966 aaKnown RBP20.14■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Igkv2-137A0A0B4J1H6 120 aa20.13■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 H2al1nQ497L1 109 aa20.13■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Sprr1bQ62267 153 aa20.13■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 BC106179Q8C9L1 186 aa20.13■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Gm1553Q66VB7 94 aa20.12■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Ankrd39Q9D2X0 183 aa20.12■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Psmb2Q9R1P3 201 aa20.12■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Defa1P11477 93 aa20.11■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Tomm6Q9CQN3 74 aa20.11■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 4930556J24RikQ9D4U7 146 aa20.11■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 P01794 123 aa20.1■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 P18527 97 aa20.1■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Dnah2P0C6F1 4456 aa20.1■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Esp24A8R0V6 68 aa20.09■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Tmem238A9JSM3 176 aa20.09■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Plac8Q9JI48 112 aa20.09■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Trav12-3A0A075B648 115 aa20.09■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 Chac1Q8R3J5 223 aa20.09■□□□□ 0.81
Ctdnep1-201ENSMUST00000108593 SpinklQ8CEK3 90 aa20.08■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 PscaP57096 123 aa20.07■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Pkd1O08852 4293 aa20.07■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Defb40Q70KL2 73 aa20.06■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Ndufa12Q7TMF3 145 aaKnown RBP20.06■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Ovol2Q8CIV7 274 aa20.06■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Trav13d-4A0A0G2JFX3 110 aa20.05■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Ndufa1O35683 70 aa20.05■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Defa16P50714 93 aa20.05■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 BaalcQ8VHV1 145 aa20.05■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Ighv2-9A0A075B5Q5 116 aa20.04■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Fgf6P21658 208 aa20.04■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 P01896 185 aa20.03■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Srsf9Q9D0B0 222 aaKnown RBP20.03■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Trav13-4-dv7A0A075B6C2 110 aa20.02■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Igkv3-12A0A140T8P0 119 aa20.02■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Ss18l2Q9D174 77 aa20.02■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Josd1Q9DBJ6 202 aa20.02■□□□□ 0.8
Ctdnep1-201ENSMUST00000108593 Tcrg-V4A0A0B4J1J8 138 aa20■□□□□ 0.79
Ctdnep1-201ENSMUST00000108593 Mpv17l2Q8VIK2 200 aa20■□□□□ 0.79
Ctdnep1-201ENSMUST00000108593 Q9D727 114 aa20■□□□□ 0.79
Ctdnep1-201ENSMUST00000108593 CnbpP53996 178 aaKnown RBP19.97■□□□□ 0.79
Ctdnep1-201ENSMUST00000108593 Mfap4Q9D1H9 257 aa19.97■□□□□ 0.79
Ctdnep1-201ENSMUST00000108593 Fam213bQ9DB60 201 aa19.94■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 9430069I07RikQ9CX21 111 aa19.94■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 LeprotO89013 131 aa19.92■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 Igkv4-92A0A0B4J1I2 117 aa19.91■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 SpxD3Z752 116 aa19.91■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 Gm10837Q3UTT8 145 aa19.91■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 Prss58Q8BW11 241 aa19.91■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 Rbm7Q9CQT2 265 aaKnown RBP19.91■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 Tmem97Q8VD00 176 aa19.9■□□□□ 0.78
Ctdnep1-201ENSMUST00000108593 Ube2wQ8VDW4 151 aa19.89■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Zfand2aQ9JII7 171 aa19.88■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Hspb8Q9JK92 196 aa19.88■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Ighv1-62-1A0A075B5U3 116 aa19.87■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Gm45717A0A1B0GT68 152 aa19.87■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Trav11A0A0B4J1J9 114 aa19.87■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Gm2696A0A1W2P709 240 aa19.86■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Cox8bP48772 70 aa19.86■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Bsph2Q0Q236 131 aa19.86■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Znf664Q4VA44 261 aa19.85■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 IqcjQ8BPW0 110 aa19.85■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Ighv1-56A0A0A6YXG2 117 aa19.84■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Slc25a2Q99ML6 265 aa19.84■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 4930519P11RikQ9CUJ8 166 aa19.84■□□□□ 0.77
Ctdnep1-201ENSMUST00000108593 Scgb1b10A0A087WPW0 93 aa19.83■□□□□ 0.76
Ctdnep1-201ENSMUST00000108593 Gm28305F6U473 122 aa19.81■□□□□ 0.76
Ctdnep1-201ENSMUST00000108593 Rpl13aP19253 203 aaKnown RBP19.81■□□□□ 0.76
Ctdnep1-201ENSMUST00000108593 Defa9P50707 93 aa19.81■□□□□ 0.76
Ctdnep1-201ENSMUST00000108593 Pgpep1Q9ESW8 209 aa19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms