RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 4930442H23RikQ9D5G7 103 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Serp1Q9Z1W5 66 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Sptbn4E9PX29 2561 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Prpf8Q99PV0 2335 aaKnown RBP6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ly6gP35461 111 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 4930535I16RikQ9CUI2 172 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 3110018I06RikQ9CXS0 120 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Znf580Q9DB38 172 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Igkv4-62A0A0G2JDW9 117 aa6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Usmg5Q78IK2 58 aa6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ighv1-63A0A075B5X2 117 aa6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ighv2-6-8A0A0A6YWY9 116 aa6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Cela2aP05208 271 aa6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Tmem223Q9CQE2 199 aaKnown RBP6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Krtap26-1Q9D7N2 215 aa6.05□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Pla2g2aP31482 146 aa6.04□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Gm29666A0A087WQ99 126 aa6.04□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Erdr1J3QMM0 206 aa6.04□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Dad1P61804 113 aa6.04□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ighv1-58A0A075B5W9 117 aa6.04□□□□□ -1.44
Cdc40-201ENSMUST00000044166 OdaphJ3QNT8 126 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Rmi2Q3UPE3 149 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Eif4ebp1Q60876 117 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 4930415O20RikQ8CDT5 131 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Notch3Q61982 2318 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Spag11Q8K4N2 71 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 CrygfQ9CXV3 174 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 4930564D02RikQ9D4S4 103 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ndufa11Q9D8B4 141 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 3110070M22RikQ9DAQ7 118 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Col6a4A2AX52 2309 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Glrp1E9Q9S8 174 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 BlcapP62951 87 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 H1fxQ80ZM5 188 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Prelid3aQ8VE85 172 aa6.03□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ankrd11E9Q4F7 2643 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 NbeaQ9EPN1 2936 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Bles03Q8VD62 251 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Dnal4Q9DCM4 105 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Trav4-3A0A0B4J1K1 110 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm9887F6RFI0 207 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Sprr3O09116 238 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 BC048502Q80Y74 154 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm20730A0A075B5J6 119 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Trav11A0A0B4J1J9 114 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Spint4Q9D263 159 aa6.02□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Itpr1P11881 2749 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Krtap27-1E9PX37 202 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Spink12Q9D256 87 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Akap6E9Q9K8 2307 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ep300B2RWS6 2412 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Muc4Q8JZM8 3443 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 CrygaP04345 174 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Spink8Q09TK9 105 aa6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ankhd1E9PUR0 2548 aaKnown RBP6.01□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ndufs7Q9DC70 224 aa6□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Bri3P28662 125 aa6□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Rpl28P41105 137 aaKnown RBP6□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Defb33Q30KN3 62 aa6□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Tep1P97499 2629 aa6□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ighv2-3A0A075B696 115 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm10553J3QPF1 123 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 MsmbO08540 113 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm10226O88253 85 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Wfdc15aQ8BH89 80 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Phpt1Q9DAK9 124 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Trav13d-1A0A075B606 110 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ighv1-11A0A0A6YWI9 117 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Cops9Q3U898 57 aa5.99□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Cox17P56394 63 aa5.98□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm10837Q3UTT8 145 aa5.98□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Igkv4-91A0A075B5L2 119 aa5.98□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm10322F7D7I4 111 aa5.98□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm10490F6VBM2 120 aa5.98□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ighv2-7A0A075B5Q8 116 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 1810032O08RikE9PZV8 113 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ighv1-72P01751 139 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ang3P97802 145 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 5730596B20RikQ8BQ08 205 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Inafm2A0A1L1STD6 152 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Fgfbp3Q1HCM0 245 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm9747Q810H1 104 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 1700010B08RikQ9DAI7 102 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ttc28Q80XJ3 2450 aa5.97□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Trav9-2A0A075B647 113 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Trdv5A0A075B661 115 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Trav9-4A0A0B4J1K2 113 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm10509O88255 85 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Ube2e2Q91W82 201 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Dynlrb2Q9DAJ5 96 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 HampQ9EQ21 83 aa5.96□□□□□ -1.45
Cdc40-201ENSMUST00000044166 Gm11011D3Z3L9 86 aa5.96□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Eif4ebp3Q80VV3 101 aa5.96□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Fam229bQ8CF36 80 aa5.96□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Vpreb2P13373 142 aa5.96□□□□□ -1.46
Cdc40-201ENSMUST00000044166 PlaurP35456 327 aa5.96□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Myo9aQ8C170 2542 aa5.95□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Krtap16-1A2A5X5 502 aa5.95□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Lyrm9Q3UN90 78 aa5.95□□□□□ -1.46
Cdc40-201ENSMUST00000044166 EnhoQ8K1D8 76 aa5.95□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms