RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 P01791 123 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 NdpP48744 131 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 Eif4ebp1Q60876 117 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 Gm1553Q66VB7 94 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 CnfnQ6PCW6 111 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 Chchd10Q7TNL9 138 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 A830005F24RikQ8BRT5 167 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 MplkipQ9D011 178 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 Crip2Q9DCT8 208 aaKnown RBP3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 Col12a1Q60847 3120 aa3.6□□□□□ -1.83
Clk1-201ENSMUST00000034868 Armcx4E9PWM3 2356 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Ighv1-62-1A0A075B5U3 116 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Trav7-6A0A075B640 112 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Trav6d-3A0A075B6B3 112 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Igkv3-7A0A0G2JE31 119 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Gm44965A0A0N4SVR3 59 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Igkv1-131A0A140T8M8 120 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 P01837 106 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 KncnQ307W7 124 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 Trav6-3Q5R1E6 112 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 RhohQ9D3G9 191 aa3.59□□□□□ -1.83
Clk1-201ENSMUST00000034868 SetxA2AKX3 2646 aa3.59□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ccl26F8VQM2 93 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 P01820 115 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 PdpnQ62011 172 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Fam19a4Q7TPG5 135 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Lyzl1Q9CPX3 148 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igsf10Q3V1M1 2594 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ubr5Q80TP3 2792 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Abca7Q91V24 2159 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 NbeaQ9EPN1 2936 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv14-100A0A0G2JG36 117 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm3285A0A1W2P7U0 201 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm13090A2A899 111 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 BikO70337 150 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 P01795 144 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Saa3P04918 122 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Znf691Q3TDE8 283 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ndufa12Q7TMF3 145 aaKnown RBP3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 AI854703Q8BIN3 203 aa3.58□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igfn1Q3KNY0 2849 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv4-80A0A075B5L7 116 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ighv1-80A0A075B5Y3 117 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv6-32A0A140T8N9 115 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 4930447F04RikA2AFR2 126 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Rtl10D3YWW5 146 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 P01792 123 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 P01794 123 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ccl3P10855 92 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Trav6-2Q5R1I4 113 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Smim37Q8BT35 56 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm4763Q8CFJ5 196 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ndufs5Q99LY9 106 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Pi4kaE9Q3L2 2105 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Cdh23Q99PF4 3354 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ttc28Q80XJ3 2450 aa3.57□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ahctf1Q8CJF7 2243 aaKnown RBP3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv14-130A0A0G2JF45 117 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm44790A0A0N4SV91 103 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 E030018B13RikJ3QMS9 113 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Rnase1P00683 149 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Mrpl35Q9CQL6 188 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 4933414I15RikQ9D4D5 133 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Lyzl4Q9D925 145 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 HilpdaQ9JLS0 64 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 DspE9Q557 2883 aaKnown RBP3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 CicQ924A2 2510 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Sdk1Q3UH53 2193 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 SvilQ8K4L3 2170 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Dmxl1Q6PNC0 3013 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ighv7-1A0A075B5S2 121 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ighv1-49A0A0A6YWX2 117 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Brd3osA0A1B0GRB6 84 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm10401E9Q3K6 71 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Reg3aO09037 175 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Sh2d1aO88890 126 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Rpl28P41105 137 aaKnown RBP3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ifitm10Q8BR26 201 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm5142Q8C5X9 133 aa3.56□□□□□ -1.84
Clk1-201ENSMUST00000034868 Fbn2Q61555 2907 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 Prrc2aQ7TSC1 2158 aaKnown RBP3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv6-25A0A140T8N7 115 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm9970F6ZED4 185 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 Edn3P48299 214 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ly6eQ64253 130 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 MobpQ9D2P8 170 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 4930442H23RikQ9D5G7 103 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ndufs7Q9DC70 224 aa3.55□□□□□ -1.84
Clk1-201ENSMUST00000034868 SonQ9QX47 2444 aaKnown RBP3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv4-90A0A075B5L3 117 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Ighv5-4A0A075B5P9 117 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Gm6525A0A0A6YW33 106 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Rnase2bO35292 155 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 P01755 137 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 MgpP19788 104 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Tcl1b5P56845 121 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Rpl36aP83882 106 aaKnown RBP3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Sdk2Q6V4S5 2176 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Tex36Q9D5N9 219 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Snai3Q9QY31 287 aa3.54□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms