RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Trav13n-2A0A0G2JF93 110 aa14.26□□□□□ -0.13
Trim71-201ENSMUST00000111816 UqcrqQ9CQ69 82 aa14.26□□□□□ -0.13
Trim71-201ENSMUST00000111816 NpbQ8K4P1 119 aa14.26□□□□□ -0.13
Trim71-201ENSMUST00000111816 Prok1Q14A28 105 aa14.26□□□□□ -0.13
Trim71-201ENSMUST00000111816 Fstl3Q9EQC7 256 aa14.26□□□□□ -0.13
Trim71-201ENSMUST00000111816 P01729 129 aa14.25□□□□□ -0.13
Trim71-201ENSMUST00000111816 Vopp1Q8R1C3 172 aa14.25□□□□□ -0.13
Trim71-201ENSMUST00000111816 PpdpfQ9CR37 115 aa14.25□□□□□ -0.13
Trim71-201ENSMUST00000111816 Triap1Q9D8Z2 76 aa14.25□□□□□ -0.13
Trim71-201ENSMUST00000111816 Igkv1-117A0A140T8M0 119 aa14.24□□□□□ -0.13
Trim71-201ENSMUST00000111816 Fam110aQ8R184 296 aa14.24□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ighv3-6P18531 116 aa14.24□□□□□ -0.13
Trim71-201ENSMUST00000111816 Cd164Q9R0L9 197 aa14.24□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ube2d4D3YUH6 135 aa14.24□□□□□ -0.13
Trim71-201ENSMUST00000111816 CtrlQ9ER05 264 aa14.24□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ighv10-1A0A0B4J1J6 119 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ighv3-1A0A075B5S6 116 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ly6c1P0CW02 131 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Piezo1E2JF22 2547 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Spag11Q8K4N2 71 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Trav13d-4A0A0G2JFX3 110 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Rpl39P62892 51 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 Fhl4Q8CDC8 279 aa14.23□□□□□ -0.13
Trim71-201ENSMUST00000111816 5730596B20RikQ8BQ08 205 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ube2d2P62838 147 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 A230072I06RikQ3UUJ8 172 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 Col4a1P02463 1669 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 Gm15217A2CG07 155 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ighv8-5A0A0A6YY60 119 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 Pcsk5Q04592 1877 aa14.22□□□□□ -0.13
Trim71-201ENSMUST00000111816 Ighv1-12A0A0A6YXJ9 117 aa14.21□□□□□ -0.13
Trim71-201ENSMUST00000111816 Gphb5Q812B2 130 aa14.21□□□□□ -0.13
Trim71-201ENSMUST00000111816 Fam19a1Q7TPG8 133 aa14.21□□□□□ -0.14
Trim71-201ENSMUST00000111816 Tcl1b5P56845 121 aa14.21□□□□□ -0.14
Trim71-201ENSMUST00000111816 Trav13-2A0A075B649 110 aa14.2□□□□□ -0.14
Trim71-201ENSMUST00000111816 AmelxP63277 210 aa14.2□□□□□ -0.14
Trim71-201ENSMUST00000111816 BtcQ05928 177 aa14.2□□□□□ -0.14
Trim71-201ENSMUST00000111816 Mapk1ip1lQ8BH93 242 aa14.2□□□□□ -0.14
Trim71-201ENSMUST00000111816 Gm1968Q3T9I3 115 aa14.19□□□□□ -0.14
Trim71-201ENSMUST00000111816 Trav13n-1A0A0G2JEU8 110 aa14.19□□□□□ -0.14
Trim71-201ENSMUST00000111816 Gm9887F6RFI0 207 aa14.19□□□□□ -0.14
Trim71-201ENSMUST00000111816 OdaphJ3QNT8 126 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 Trav9-2A0A075B647 113 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 Trav9-4A0A0B4J1K2 113 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 Trav9n-2A0A0G2JDP3 113 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 P01753 117 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 Loxl1P97873 607 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 Tnfrsf13bQ9ET35 249 aa14.18□□□□□ -0.14
Trim71-201ENSMUST00000111816 A830005F24RikQ8BRT5 167 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Igkv1-110A0A0B4J1I0 119 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Gm17359A0A0G2JEB7 487 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Fhl1P97447 280 aaKnown RBP14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Igkv12-89A0A0G2JGW8 112 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Usp9yF8VPU6 2556 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Plac8l1Q08EJ0 177 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Snai3Q9QY31 287 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Ighv1-61P01749 117 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 P04945 108 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Ufsp1Q9CZP0 217 aa14.17□□□□□ -0.14
Trim71-201ENSMUST00000111816 Gp9O88186 177 aa14.16□□□□□ -0.14
Trim71-201ENSMUST00000111816 Znf672Q99LH4 468 aa14.16□□□□□ -0.14
Trim71-201ENSMUST00000111816 Ntf4Q80VU4 209 aa14.15□□□□□ -0.14
Trim71-201ENSMUST00000111816 BC107364E9Q5A2 140 aa14.15□□□□□ -0.14
Trim71-201ENSMUST00000111816 Gm44965A0A0N4SVR3 59 aa14.15□□□□□ -0.14
Trim71-201ENSMUST00000111816 Igkv3-7A0A0G2JE31 119 aa14.15□□□□□ -0.14
Trim71-201ENSMUST00000111816 Ly6gP35461 111 aa14.15□□□□□ -0.14
Trim71-201ENSMUST00000111816 Gm9970F6ZED4 185 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Pla2g5P97391 137 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 P01750 117 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Ighv1-82A0A0G2JEU7 117 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Gm10638F6QEG2 257 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 A0A286YE49 62 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Gm37988J3QM41 62 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Gm10881P01642 115 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Ighv1-11A0A0A6YWI9 117 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 LoxP28301 411 aa14.14□□□□□ -0.15
Trim71-201ENSMUST00000111816 Trav13d-1A0A075B606 110 aa14.13□□□□□ -0.15
Trim71-201ENSMUST00000111816 Ighv10-3A0A075B5T6 119 aa14.13□□□□□ -0.15
Trim71-201ENSMUST00000111816 Ifitm6A0A1B0GS75 124 aa14.13□□□□□ -0.15
Trim71-201ENSMUST00000111816 Odf3Q920N1 254 aa14.13□□□□□ -0.15
Trim71-201ENSMUST00000111816 Trav13-1A0A075B644 110 aa14.12□□□□□ -0.15
Trim71-201ENSMUST00000111816 Ankrd11E9Q4F7 2643 aa14.11□□□□□ -0.15
Trim71-201ENSMUST00000111816 Znf706Q9D115 76 aaKnown RBP14.11□□□□□ -0.15
Trim71-201ENSMUST00000111816 Gm9805F6YK59 57 aa14.11□□□□□ -0.15
Trim71-201ENSMUST00000111816 HrnrQ8VHD8 2496 aa14.1□□□□□ -0.15
Trim71-201ENSMUST00000111816 Trav13-4-dv7A0A075B6C2 110 aa14.1□□□□□ -0.15
Trim71-201ENSMUST00000111816 Trbv13-1A0A0B4J1P8 112 aa14.1□□□□□ -0.15
Trim71-201ENSMUST00000111816 Igkv9-123A0A140T8N8 117 aa14.09□□□□□ -0.15
Trim71-201ENSMUST00000111816 Dkk4Q8VEJ3 221 aa14.09□□□□□ -0.15
Trim71-201ENSMUST00000111816 Fam19a4Q7TPG5 135 aa14.08□□□□□ -0.15
Trim71-201ENSMUST00000111816 Usp9xP70398 2559 aaKnown RBP14.08□□□□□ -0.16
Trim71-201ENSMUST00000111816 9430015G10RikA2ASP7 199 aa14.08□□□□□ -0.16
Trim71-201ENSMUST00000111816 Gm17677B3GLJ5 116 aa14.07□□□□□ -0.16
Trim71-201ENSMUST00000111816 Gm10542F6XDR3 90 aa14.07□□□□□ -0.16
Trim71-201ENSMUST00000111816 Ighv1-53A0A075B5W3 117 aa14.07□□□□□ -0.16
Trim71-201ENSMUST00000111816 P01748 117 aa14.07□□□□□ -0.16
Trim71-201ENSMUST00000111816 Epg5Q80TA9 2572 aa14.07□□□□□ -0.16
Trim71-201ENSMUST00000111816 Prok2Q9QXU7 128 aa14.06□□□□□ -0.16
Trim71-201ENSMUST00000111816 P04940 107 aa14.06□□□□□ -0.16
Trim71-201ENSMUST00000111816 P04941 107 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms