RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 A530064D06RikQ8BNV8 229 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm9913Q8BQQ2 135 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Rnf183Q8QZS5 190 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm29423A0A087WRM1 55 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm11020F6ZGD5 61 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Tmem101Q91VP7 257 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Trav9n-2A0A0G2JDP3 113 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm5089A1L3C8 106 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Rpl36aP83882 106 aaKnown RBP5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 ScxQ64124 207 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Igkv4-62A0A0G2JDW9 117 aa5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gcn1E9PVA8 2671 aaKnown RBP5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Spink1P09036 80 aa5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 HampQ9EQ21 83 aa5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Rif1Q6PR54 2419 aaKnown RBP5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm20730A0A075B5J6 119 aa5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Cops9Q3U898 57 aa5.54□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Psmb8P28063 276 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Mapk1ip1lQ8BH93 242 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 4930564D02RikQ9D4S4 103 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Fhl2O70433 279 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Ube2d1P61080 147 aaKnown RBP5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Defb26Q30KN7 186 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Rmi2Q3UPE3 149 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Cfap126Q6P8X9 189 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 4930470P17RikQ9D542 155 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 4930442H23RikQ9D5G7 103 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Ucn2Q99ML8 113 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 4930544G11RikQ9CR99 193 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Q9DAQ5 155 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 NbeaQ9EPN1 2936 aa5.53□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Bri3P28662 125 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 BC025920Q3US60 128 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Morn5Q9DAI9 170 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Phpt1Q9DAK9 124 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ighv8-5A0A0A6YY60 119 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm10490F6VBM2 120 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Defb47Q30KN1 79 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Il1f10Q8R459 152 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Myo9aQ8C170 2542 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Smr3aQ61900 147 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 H1fxQ80ZM5 188 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Wfdc15aQ8BH89 80 aa5.52□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ccl21aP84444 133 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ccl21bP86792 133 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ccl21cP86793 133 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 MtorQ9JLN9 2549 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ighv1-11A0A0A6YWI9 117 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 A930009A15RikG3UYI6 118 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm9936Q8C864 160 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Cyyr1Q8VIH7 165 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Q99M08 65 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ighv1-5A0A0A6YWG2 117 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 4930415O20RikQ8CDT5 131 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ighv2-6-8A0A0A6YWY9 116 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm20726G3UX18 150 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 MalO09198 153 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Tmem213Q08EA8 116 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Krtap26-1Q9D7N2 215 aa5.51□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Trav13d-1A0A075B606 110 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Defb45Q3V490 66 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Wdr38Q9D994 303 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Krtap27-1E9PX37 202 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Rpl35aO55142 110 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ighv1-49A0A0A6YWX2 117 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Glrp1E9Q9S8 174 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Fgfbp3Q1HCM0 245 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Tmem86bQ497J1 226 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ndufa3Q9CQ91 84 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Csmd1Q923L3 3564 aa5.5□□□□□ -1.53
Bdnf-207ENSMUST00000111047 TrrapQ80YV3 2565 aaKnown RBP5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm20604F8WIA3 75 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ang3P97802 145 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 D130052B06RikQ3UW13 202 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Rnase1P00683 149 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm10767Q3TQP0 103 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm21748Q3UE70 102 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm9195A0A140LHT4 2805 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 B230217C12RikE9Q3Z1 139 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ube2d3P61079 147 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ube2d2P62838 147 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 P84751 237 aa5.49□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Hivep2Q3UHF7 2430 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm10509O88255 85 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Foxc1Q61572 553 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Ube2wQ8VDW4 151 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gata1P17679 413 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Defa25Q5G864 92 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Fam110dQ80X91 271 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Trav4d-3A0A075B625 110 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Rbmy1bQ60990 380 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 SpinklQ8CEK3 90 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Lgals4Q8K419 326 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Nop10Q9CQS2 64 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Mrpl52Q9D0Y8 121 aa5.48□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Csmd2V9GX34 3611 aa5.47□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Trav4-3A0A0B4J1K1 110 aa5.47□□□□□ -1.53
Bdnf-207ENSMUST00000111047 A030005K14RikA0A1Y7VNY1 122 aa5.47□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Atp5eP56382 52 aa5.47□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Gm8439G3UWA7 96 aa5.47□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms