RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Avpi1Q9D7H4 142 aa11.95□□□□□ -0.5
Trim8-201ENSMUST00000026008 Trav9n-2A0A0G2JDP3 113 aa11.95□□□□□ -0.5
Trim8-201ENSMUST00000026008 Gm10135F6TEE5 83 aa11.94□□□□□ -0.5
Trim8-201ENSMUST00000026008 P84751 237 aa11.94□□□□□ -0.5
Trim8-201ENSMUST00000026008 Unc79Q0KK59 2596 aa11.94□□□□□ -0.5
Trim8-201ENSMUST00000026008 Trav7d-3Q5R1I1 112 aa11.93□□□□□ -0.5
Trim8-201ENSMUST00000026008 GalmQ8K157 342 aa11.93□□□□□ -0.5
Trim8-201ENSMUST00000026008 4930470P17RikQ9D542 155 aa11.93□□□□□ -0.5
Trim8-201ENSMUST00000026008 Cks1bP61025 79 aa11.93□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ube2e2Q91W82 201 aa11.93□□□□□ -0.5
Trim8-201ENSMUST00000026008 Gm11020F6ZGD5 61 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 P06329 120 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 BC048562Q80ZQ7 204 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 Atp6v0e2Q91XE7 81 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 Q9DAQ5 155 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 Klk1b4P00757 256 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 Cfc1P97766 202 aa11.92□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ankrd17Q99NH0 2603 aaKnown RBP11.91□□□□□ -0.5
Trim8-201ENSMUST00000026008 Krtap27-1E9PX37 202 aa11.91□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ccl21aP84444 133 aa11.91□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ccl21bP86792 133 aa11.91□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ccl21cP86793 133 aa11.91□□□□□ -0.5
Trim8-201ENSMUST00000026008 CubnQ9JLB4 3623 aa11.91□□□□□ -0.5
Trim8-201ENSMUST00000026008 Rpl32-psP17932 135 aa11.9□□□□□ -0.5
Trim8-201ENSMUST00000026008 Gm815Q3UWS2 115 aa11.9□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ifitm1Q9D103 106 aa11.9□□□□□ -0.5
Trim8-201ENSMUST00000026008 Gm29423A0A087WRM1 55 aa11.9□□□□□ -0.5
Trim8-201ENSMUST00000026008 Nhlrc1Q8BR37 401 aa11.9□□□□□ -0.5
Trim8-201ENSMUST00000026008 Anapc13Q8R034 74 aa11.9□□□□□ -0.5
Trim8-201ENSMUST00000026008 Gm7849D3YX03 116 aa11.9□□□□□ -0.51
Trim8-201ENSMUST00000026008 Gata1P17679 413 aa11.9□□□□□ -0.51
Trim8-201ENSMUST00000026008 Gm10509O88255 85 aa11.89□□□□□ -0.51
Trim8-201ENSMUST00000026008 Rbmy1bQ60990 380 aa11.89□□□□□ -0.51
Trim8-201ENSMUST00000026008 4930415O20RikQ8CDT5 131 aa11.89□□□□□ -0.51
Trim8-201ENSMUST00000026008 Phlda3Q9WV95 125 aa11.89□□□□□ -0.51
Trim8-201ENSMUST00000026008 Trbv30A0A0B4J1P1 111 aa11.88□□□□□ -0.51
Trim8-201ENSMUST00000026008 3110070M22RikQ9DAQ7 118 aa11.88□□□□□ -0.51
Trim8-201ENSMUST00000026008 Scgb1b2O35176 93 aa11.88□□□□□ -0.51
Trim8-201ENSMUST00000026008 Ighv1-72P01751 139 aa11.88□□□□□ -0.51
Trim8-201ENSMUST00000026008 P01786 117 aa11.88□□□□□ -0.51
Trim8-201ENSMUST00000026008 Ucn2Q99ML8 113 aa11.88□□□□□ -0.51
Trim8-201ENSMUST00000026008 Brwd1Q921C3 2304 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Epg5Q80TA9 2572 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Ighv2-6-8A0A0A6YWY9 116 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Igkv4-78A0A0A6YYE5 119 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Igkv4-68A0A0B4J1I7 117 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Ifi27l2aQ8R412 90 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Zfp462B1AWL2 2495 aaKnown RBP11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Trdv5A0A075B661 115 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 P01738 130 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Psmb8P28063 276 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Gm4861Q8C5A4 106 aa11.87□□□□□ -0.51
Trim8-201ENSMUST00000026008 Pdzd2E9Q1M1 2796 aa11.86□□□□□ -0.51
Trim8-201ENSMUST00000026008 Col7a1Q63870 2944 aa11.86□□□□□ -0.51
Trim8-201ENSMUST00000026008 Usp9yF8VPU6 2556 aa11.86□□□□□ -0.51
Trim8-201ENSMUST00000026008 Lgals4Q8K419 326 aa11.86□□□□□ -0.51
Trim8-201ENSMUST00000026008 Dmbt1Q60997 2085 aa11.85□□□□□ -0.51
Trim8-201ENSMUST00000026008 Smim10l1A0A087WNQ7 89 aa11.85□□□□□ -0.51
Trim8-201ENSMUST00000026008 Gm9887F6RFI0 207 aa11.85□□□□□ -0.51
Trim8-201ENSMUST00000026008 Ang3P97802 145 aa11.85□□□□□ -0.51
Trim8-201ENSMUST00000026008 Ly86O88188 162 aa11.85□□□□□ -0.51
Trim8-201ENSMUST00000026008 Spink1P09036 80 aa11.85□□□□□ -0.51
Trim8-201ENSMUST00000026008 Gm10542F6XDR3 90 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Atp5g3P56384 141 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Mapk1ip1lQ8BH93 242 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Mast4Q811L6 2618 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Prp2P05143 317 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 RetnQ99P87 114 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Fgf23Q9EPC2 251 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Scgb1b24B1B0N6 92 aa11.84□□□□□ -0.51
Trim8-201ENSMUST00000026008 Helz2E9QAM5 2947 aaKnown RBP11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 Fam110dQ80X91 271 aa11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 Cep192E9Q4Y4 2514 aaKnown RBP11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm6793B2RXM2 351 aa11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 Glrp1E9Q9S8 174 aa11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 1700020N15RikL7MTX3 112 aa11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 Ly6gP35461 111 aa11.83□□□□□ -0.52
Trim8-201ENSMUST00000026008 Trav7-6A0A075B640 112 aa11.82□□□□□ -0.52
Trim8-201ENSMUST00000026008 Ighv1-11A0A0A6YWI9 117 aa11.82□□□□□ -0.52
Trim8-201ENSMUST00000026008 Rnf183Q8QZS5 190 aa11.82□□□□□ -0.52
Trim8-201ENSMUST00000026008 Lyrm7Q9DA03 104 aa11.82□□□□□ -0.52
Trim8-201ENSMUST00000026008 Setd2E9Q5F9 2537 aa11.82□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm9747Q810H1 104 aa11.82□□□□□ -0.52
Trim8-201ENSMUST00000026008 Trav13n-1A0A0G2JEU8 110 aa11.81□□□□□ -0.52
Trim8-201ENSMUST00000026008 Srp14P16254 110 aaKnown RBP11.81□□□□□ -0.52
Trim8-201ENSMUST00000026008 Xirp2Q4U4S6 3784 aa11.81□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm3443F7CCV5 94 aa11.81□□□□□ -0.52
Trim8-201ENSMUST00000026008 Cox17P56394 63 aa11.81□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm9936Q8C864 160 aa11.8□□□□□ -0.52
Trim8-201ENSMUST00000026008 Srsf12Q8C8K3 266 aa11.8□□□□□ -0.52
Trim8-201ENSMUST00000026008 Prelid3aQ8VE85 172 aa11.8□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm5089A1L3C8 106 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm11565A2A4M7 156 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 Fgfbp3Q1HCM0 245 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 Tmem101Q91VP7 257 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 Tenm3Q9WTS6 2715 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 Gm10767Q3TQP0 103 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 Eif4ebp3Q80VV3 101 aa11.79□□□□□ -0.52
Trim8-201ENSMUST00000026008 C2cd3Q52KB6 2323 aa11.78□□□□□ -0.52
Trim8-201ENSMUST00000026008 PrlhG3UWC3 86 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 65.8 ms