RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 1810032O08RikE9PZV8 113 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 ThadaA8C756 1938 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Dopey1Q8BL99 2399 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 AcacbE9Q4Z2 2448 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ighv5-8A0A075B676 92 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Gm20604F8WIA3 75 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Cox7bP56393 80 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 B9d2Q3UK10 175 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Csdc2Q91YQ3 154 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Esm1Q9QYY7 184 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Plxnd1Q3UH93 1925 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 H2al1mQ9DAD9 105 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 P04943 107 aa9.24□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Spry4Q9WTP2 300 aa9.24□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ighv12-3A0A075B5T1 117 aa9.24□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Arid2E9Q7E2 1828 aa9.24□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Trav9n-4A0A075B631 113 aa9.24□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 PtprfA2A8L5 1898 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ebi3O35228 228 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 1520401A03RikA0A0J9YVH6 598 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Hoxb4P10284 250 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 2010109I03RikQ9CQ11 111 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Gm21994F6T2D2 329 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 C2cd3Q52KB6 2323 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ufsp1Q9CZP0 217 aa9.23□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 SnurfQ9WU12 71 aa9.22□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 4930432M17RikQ3V0W9 174 aa9.22□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ighv1-62-1A0A075B5U3 116 aa9.22□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ube2aQ9Z255 152 aa9.22□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Gm5878E9PUB3 99 aa9.22□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Znf239P24399 201 aa9.22□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Trbv13-2A0A140T8N6 113 aa9.21□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Gm15557A6PWY0 234 aa9.21□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 BaalcQ8VHV1 145 aa9.21□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Cyyr1Q8VIH7 165 aa9.21□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ighv1-82A0A0G2JEU7 117 aa9.21□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 CdsnQ7TPC1 561 aa9.21□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Defb13Q8R2I4 64 aa9.21□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Cspg4Q8VHY0 2327 aa9.21□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Nup210lQ9D2F7 1881 aa9.2□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Tet1Q3URK3 2007 aaKnown RBP9.2□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Prrc2aQ7TSC1 2158 aaKnown RBP9.2□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Plxna4Q80UG2 1893 aa9.19□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 AcanQ61282 2132 aaKnown RBP9.19□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Defb40Q70KL2 73 aa9.19□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ighv1-85A0A075B5Y6 117 aa9.19□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Itgb4A2A863 1818 aa9.19□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ighv1-75A0A075B5Y2 117 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ighv10-1A0A0B4J1J6 119 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 P01823 113 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 A830005F24RikQ8BRT5 167 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Gm16223Q8CBM3 117 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Gm11011D3Z3L9 86 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Nlrc5C3VPR6 1915 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 DysfQ9ESD7 2090 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Gm9805F6YK59 57 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Gm21748Q3UE70 102 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Dkk4Q8VEJ3 221 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 P01643 108 aa9.18□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Igkv3-3A0A140T8Q0 119 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ppp1r32Q148A4 427 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 SrarpQ3ULG3 163 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Arhgap32Q811P8 2089 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Eif4ebp1Q60876 117 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 LctF8VPT3 1931 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 StrcQ8VIM6 1809 aa9.17□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Nckap5E9QAE1 1909 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 NbasE9Q411 2356 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Spink13Q3UTS8 97 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Cdip1Q9DB75 208 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Pcnx2Q5DU28 2122 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Edn3P48299 214 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 P84750 121 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 4930564D02RikQ9D4S4 103 aa9.16□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Reg3bP35230 175 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ighv2-6-8A0A0A6YWY9 116 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ube2d3P61079 147 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ube2d1P61080 147 aaKnown RBP9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ube2d2P62838 147 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Sbf1Q6ZPE2 1867 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Ighv1-72P01751 139 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Gm10735Q3US96 136 aa9.15□□□□□ -0.94
Pcdhac1-201ENSMUST00000007584 Plxna3P70208 1872 aa9.15□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 TshbP12656 138 aa9.15□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Tcl1b3P56842 122 aa9.15□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Igf2rQ07113 2483 aaKnown RBP9.15□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Col11a1Q61245 1804 aa9.15□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Gm9958Q8C9U4 106 aa9.14□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Tanc2A2A690 1994 aa9.14□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Col4a5Q63ZW6 1691 aa9.14□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Tcte2E9PY37 120 aa9.14□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 AgrnA2ASQ1 1950 aa9.13□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Ighv10-3A0A075B5T6 119 aa9.13□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Ccl21aP84444 133 aa9.13□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Ccl21bP86792 133 aa9.13□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Ccl21cP86793 133 aa9.13□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 CstadQ9D245 104 aa9.13□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Gm37988J3QM41 62 aa9.12□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 E030018B13RikJ3QMS9 113 aa9.12□□□□□ -0.95
Pcdhac1-201ENSMUST00000007584 Fhl1P97447 280 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms