RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Trav9d-3A0A075B695 113 aa12.01□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Gm5878E9PUB3 99 aa12.01□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Eif4ebp1Q60876 117 aa12.01□□□□□ -0.49
Clcn3-203ENSMUST00000093490 PrcdQ00LT2 53 aa12.01□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Igkv4-74A0A0B4J1I3 119 aa12.01□□□□□ -0.49
Clcn3-203ENSMUST00000093490 E130116L18RikQ8BMV6 101 aa12.01□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Spink8Q09TK9 105 aa12□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ighv13-2A0A0A6YWN3 119 aa12□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ucn2Q99ML8 113 aa12□□□□□ -0.49
Clcn3-203ENSMUST00000093490 E130114P18RikF6S0S7 154 aa12□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Gata1P17679 413 aa12□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Tm2d2Q8R0I4 213 aa11.99□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ighv1-75A0A075B5Y2 117 aa11.99□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Trav7-6A0A075B640 112 aa11.99□□□□□ -0.49
Clcn3-203ENSMUST00000093490 1810032O08RikE9PZV8 113 aa11.98□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Prp2P05143 317 aa11.98□□□□□ -0.49
Clcn3-203ENSMUST00000093490 PtprsB0V2N1 1907 aa11.98□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ighv1-11A0A0A6YWI9 117 aa11.98□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ly6gP35461 111 aa11.98□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Gm42674D3YUT9 64 aa11.97□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Gm4707V9GXN5 68 aa11.97□□□□□ -0.49
Clcn3-203ENSMUST00000093490 CtrlQ9ER05 264 aa11.97□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ube2bP63147 152 aa11.96□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ncor2Q9WU42 2472 aaKnown RBP11.96□□□□□ -0.49
Clcn3-203ENSMUST00000093490 AW146154Q3TPQ7 468 aa11.96□□□□□ -0.5
Clcn3-203ENSMUST00000093490 MifP34884 115 aaKnown RBP11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm3618D3Z4P5 127 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm2916Q9D9B9 127 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Cspg4Q8VHY0 2327 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Med12A2AGH6 2190 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 PpdpfQ9CR37 115 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Abca4O35600 2310 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Notch4P31695 1964 aa11.95□□□□□ -0.5
Clcn3-203ENSMUST00000093490 CadB2RQC6 2225 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm12353A2AGJ4 60 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Q9D131 166 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm17359A0A0G2JEB7 487 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Trav13n-1A0A0G2JEU8 110 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Pde6gP09174 87 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Cox7a1P56392 80 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Spry2Q9QXV8 315 aa11.94□□□□□ -0.5
Clcn3-203ENSMUST00000093490 4930546C10RikE9Q4Y3 121 aa11.93□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm17472A0A075B683 117 aa11.93□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Tcte2E9PY37 120 aa11.93□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm10226O88253 85 aa11.93□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Cox7b2Q9D2H1 82 aa11.93□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm10518F6UQQ9 182 aa11.92□□□□□ -0.5
Clcn3-203ENSMUST00000093490 BC107364E9Q5A2 140 aa11.92□□□□□ -0.5
Clcn3-203ENSMUST00000093490 P06328 117 aa11.92□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Dennd4cA6H8H2 1906 aa11.92□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Trav13d-4A0A0G2JFX3 110 aa11.92□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Ormdl1Q921I0 153 aa11.92□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Brk1Q91VR8 75 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Igkv1-122A0A140T8M9 119 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Tmem254aP0DN89 123 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Tmem254bP0DN90 123 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Tmem254cP0DN91 123 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Col6a4A2AX52 2309 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Trav13d-1A0A075B606 110 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 1700012A03RikQ9DAF1 130 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 AgrnA2ASQ1 1950 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm10251J3QPM5 127 aa11.91□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Usf3B2RUQ2 2221 aa11.9□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gvin1Q80SU7 2427 aa11.9□□□□□ -0.5
Clcn3-203ENSMUST00000093490 Gm44965A0A0N4SVR3 59 aa11.9□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Smim20D3Z7Q2 69 aa11.9□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Cfc1P97766 202 aa11.9□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Ndufc1Q9CQY9 76 aa11.89□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Fgf6P21658 208 aa11.89□□□□□ -0.51
Clcn3-203ENSMUST00000093490 4930470P17RikQ9D542 155 aa11.89□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Gm10647E9Q8X0 124 aa11.89□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Higd2aQ9CQJ1 106 aa11.88□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Vpreb2P13373 142 aa11.88□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Igkv8-26A0A075B5N5 123 aa11.88□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Gm10735Q3US96 136 aa11.88□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Triap1Q9D8Z2 76 aa11.88□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Ighv1-61P01749 117 aa11.87□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Znf575Q3TXZ1 239 aa11.87□□□□□ -0.51
Clcn3-203ENSMUST00000093490 P01659 112 aa11.86□□□□□ -0.51
Clcn3-203ENSMUST00000093490 SbsponQ3UPR9 264 aa11.86□□□□□ -0.51
Clcn3-203ENSMUST00000093490 B9d2Q3UK10 175 aa11.86□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Ly6c2P0CW03 131 aa11.85□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Col8a2P25318 699 aa11.85□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Tet2Q4JK59 1912 aaKnown RBP11.85□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Reg3bP35230 175 aa11.85□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Prr12E9PYL2 2035 aaKnown RBP11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Trav13-4-dv7A0A075B6C2 110 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Igkv1-35A0A0G2JDE5 120 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Tcl1b3P56842 122 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 P01747 120 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Gm6899Q3USS0 134 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Camk2n2Q78WH7 79 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Ighv1-82A0A0G2JEU7 117 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Gm5629P06327 117 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Psmb8P28063 276 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Rnf185Q91YT2 192 aa11.84□□□□□ -0.51
Clcn3-203ENSMUST00000093490 Gm10542F6XDR3 90 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Mrpl52Q9D0Y8 121 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Igf1P05017 153 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 SonQ9QX47 2444 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms