RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 P0C913 63 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Atp5g3P56384 141 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Atp5g1Q9CR84 136 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Lst1O08843 95 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Rnase1P00683 149 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Glrp1E9Q9S8 174 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Gm9925F6T2U3 160 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Gm10553J3QPF1 123 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 1110002E22RikE0CYV9 1786 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Greb1Q3UHK3 1954 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Col4a4Q9QZR9 1682 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Tmem258P61166 79 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Klk11Q9QYN3 276 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Trav9-2A0A075B647 113 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Trav9-4A0A0B4J1K2 113 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Atp5eP56382 52 aa12.15□□□□□ -0.46
Clcn3-203ENSMUST00000093490 IgipA0A1B0GR74 53 aa12.15□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Gm21060J3KMU4 56 aa12.15□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Ndufb4Q9CQC7 129 aa12.15□□□□□ -0.47
Clcn3-203ENSMUST00000093490 P01674 108 aa12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Sdk2Q6V4S5 2176 aa12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Obox8V9GWY9 217 aa12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Sptan1P16546 2472 aaKnown RBP12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Igkv4-79A0A075B5L8 119 aa12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Trbv16A0A0B4J1H3 115 aa12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Defb47Q30KN1 79 aa12.14□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Tmem243B2RVB9 118 aa12.13□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Iglv1A0A075B663 117 aa12.13□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Lmo4P61969 165 aa12.13□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Defb29Q8BGW9 78 aa12.13□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Cyyr1Q8VIH7 165 aa12.12□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Gm20730A0A075B5J6 119 aa12.12□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Spink10Q8CAC8 162 aa12.12□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Ppp1r32Q148A4 427 aa12.12□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Arfgef3Q3UGY8 2170 aa12.11□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Odf1Q61999 247 aa12.11□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Ighv2-6A0A075B6A7 116 aa12.11□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Lce6aD3YV94 81 aa12.11□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Spag11Q8K4N2 71 aa12.11□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Egr2P08152 470 aa12.1□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Acyp1P56376 99 aa12.1□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Igkv4-57A0A0A6YYE7 117 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Tnfrsf23Q9ER63 176 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Abca1P41233 2261 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 C920008G01RikA0A0B4J1N1 112 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 P01658 132 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 P01728 117 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 P01753 117 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Tmem213Q08EA8 116 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Crybg1A0A0G2JG52 2065 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 Wdr90Q6ZPG2 1874 aa12.09□□□□□ -0.47
Clcn3-203ENSMUST00000093490 HelzQ6DFV5 1964 aaKnown RBP12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Zfp951A0A087WRH0 451 aa12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Fer1l4A3KGK3 1992 aa12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 P01729 129 aa12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Gphb5Q812B2 130 aa12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 P01748 117 aa12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 9430069I07RikQ9CX21 111 aa12.08□□□□□ -0.48
Clcn3-203ENSMUST00000093490 FshbQ60687 130 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 CrygcQ61597 174 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Crip1P63254 77 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Foxc1Q61572 553 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Wfdc15bQ9JHY4 80 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Sprr3O09116 238 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Gm9958Q8C9U4 106 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Ndufs7Q9DC70 224 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Mrpl35Q9CQL6 188 aa12.07□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Gm14137Q8CE97 175 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Gm7257D3YX25 99 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 AngP21570 145 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Gm20726G3UX18 150 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Ighv2-7A0A075B5Q8 116 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Ighv1-53A0A075B5W3 117 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Rbm3O89086 153 aaKnown RBP12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Trav11A0A0B4J1J9 114 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Ypel4Q65Z93 127 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Odf3Q920N1 254 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 1700010B08RikQ9DAI7 102 aa12.06□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Pla2g2dQ9WVF6 144 aa12.05□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Znf672Q99LH4 468 aa12.05□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Prpf8Q99PV0 2335 aaKnown RBP12.05□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Odf3l1Q810P2 275 aa12.04□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Gm9949Q8C9F4 104 aa12.04□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Cryba4Q9JJV0 196 aa12.04□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Rpl39P62892 51 aa12.04□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Cfap126Q6P8X9 189 aa12.04□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Ep300B2RWS6 2412 aa12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Trav9n-2A0A0G2JDP3 113 aa12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Ndufa4l2Q4FZG9 87 aa12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Q9CX25 107 aa12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Fam19a4Q7TPG5 135 aa12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Tmem223Q9CQE2 199 aaKnown RBP12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Snai3Q9QY31 287 aa12.03□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Jmjd1cQ69ZK6 2350 aa12.02□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Fxyd5P97808 178 aa12.02□□□□□ -0.48
Clcn3-203ENSMUST00000093490 Trbv13-1A0A0B4J1P8 112 aa12.02□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Igkv4-58A0A0G2JGI6 119 aa12.02□□□□□ -0.49
Clcn3-203ENSMUST00000093490 OdaphJ3QNT8 126 aa12.02□□□□□ -0.49
Clcn3-203ENSMUST00000093490 Ang3P97802 145 aa12.02□□□□□ -0.49
Clcn3-203ENSMUST00000093490 P01820 115 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms