RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 P01823 113 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Cox8bP48772 70 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Pde6hP61249 83 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 7420426K07RikQ3UX66 186 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm5617Q91VN2 117 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Q9DAS2 200 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Tnfrsf13bQ9ET35 249 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Pla2g10Q9QXX3 151 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Cyb561d1A2AE42 229 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 P04940 107 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 P04942 107 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 P18532 116 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gngt2Q61017 69 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Fam168aQ8BGZ2 244 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Tctex1d1Q9D5I4 173 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Znf22Q9ERU3 237 aa6.42□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Itpr3P70227 2670 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Trav17A0A075B655 113 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Sh2d1aO88890 126 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Tnfrsf1bP25119 474 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Smim7Q5RKS2 75 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gpha2Q925Q5 128 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Higd1aQ9JLR9 95 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Smg1Q8BKX6 3658 aaKnown RBP6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 SonQ9QX47 2444 aaKnown RBP6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Krtap4-1Q3UUY3 169 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm4763Q8CFJ5 196 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 SostQ99P68 211 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gtsf1lQ9CWD0 151 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 3110070M22RikQ9DAQ7 118 aa6.41□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Dock11A2AF47 2073 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Csmd1Q923L3 3564 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Cep250Q60952 2414 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Igkv3-3A0A140T8Q0 119 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Cypt15B1AXS0 87 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm9970F6ZED4 185 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Gm5108J3QP01 101 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Wfdc5Q4KXB6 126 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Prss3Q792Z0 246 aaKnown RBP6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 MkxQ8BIA3 353 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 D630044L22RikQ8C701 164 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Smim11aQ99J19 55 aa6.4□□□□□ -1.38
Upf3b-201ENSMUST00000076265 Sptan1P16546 2472 aaKnown RBP6.4□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm42674D3YUT9 64 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Zfand2aQ9JII7 171 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Trav6-1A0A075B5Z8 112 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm10135F6TEE5 83 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 ApcsP12246 224 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 NpyP57774 97 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Lyzl4Q9D925 145 aa6.39□□□□□ -1.39
Upf3b-201ENSMUST00000076265 FauP35545 74 aaKnown RBP6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Pate2Q3UW31 111 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 4930415O20RikQ8CDT5 131 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Klk14Q8CGR5 250 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Fam208bQ5DTT3 2382 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Helz2E9QAM5 2947 aaKnown RBP6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Epg5Q80TA9 2572 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm10799F7C7U2 104 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm20696H3BJN7 74 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 P04941 107 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 MiaQ61865 130 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Mrps16Q9CPX7 135 aaKnown RBP6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 MobpQ9D2P8 170 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Cspg4Q8VHY0 2327 aa6.38□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Csmd2V9GX34 3611 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 P06334 169 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 GferP56213 198 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Cks2P56390 79 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gnb1P62874 340 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gpx7Q99LJ6 186 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Igkv6-14A0A140T8P1 115 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Mef2bO55087 349 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 P01806 116 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 NnatQ61979 81 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Jpt2Q6PGH2 190 aaKnown RBP6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 SptssaQ8R207 71 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Zfand6Q9DCH6 223 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Rpl38Q9JJI8 70 aaKnown RBP6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Prok2Q9QXU7 128 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Pla2g1bQ9Z0Y2 146 aa6.37□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Igkv4-57-1A0A075B5M4 119 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Trav6n-5A0A075B621 112 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm44790A0A0N4SV91 103 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Igkv6-23A0A140T8N5 115 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm933J3QPC1 141 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 SelenowP63300 88 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm10549Q3URY4 149 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 AbraclQ4KML4 81 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Zfp866Q6PGD2 520 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm9949Q8C9F4 104 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Defa27F2Z403 93 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Saa2P05367 122 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Rnase9P60154 184 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 P84751 237 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 FshbQ60687 130 aa6.36□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Myo7bQ99MZ6 2113 aa6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Cep192E9Q4Y4 2514 aaKnown RBP6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Gm10203F6QJ09 66 aa6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Rbm3O89086 153 aaKnown RBP6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Svs5P30933 122 aa6.35□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 93.2 ms