RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Bdp1Q571C7 2467 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Ndufa1O35683 70 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Defb26Q30KN7 186 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Gm15085Q62012 449 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Crlf1Q9JM58 425 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 P01674 108 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gata1P17679 413 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Spag11Q8K4N2 71 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Igkv4-58A0A0G2JGI6 119 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Spink8Q09TK9 105 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Mrpl52Q9D0Y8 121 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Iglv1A0A075B663 117 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm9961Q8BNV2 113 aa11.14□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Edn3P48299 214 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Ighv1-58A0A075B5W9 117 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Igkv8-34A0A0G2JDU0 121 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm10775Q3V290 127 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Abca1P41233 2261 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Trav11A0A0B4J1J9 114 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Luzp4B1AV09 449 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm15127B1AVZ5 449 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm15107B1B0X0 449 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 P04943 107 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm19410A0A140LJC7 2098 aa11.13□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Ighv2-6A0A075B6A7 116 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 IgipA0A1B0GR74 53 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Acyp1P56376 99 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Atp5g3P56384 141 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Atp5g1Q9CR84 136 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 P04944 107 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Bub3Q9WVA3 326 aa11.12□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Trav7-6A0A075B640 112 aa11.11□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Sp5Q9JHX2 398 aa11.11□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Ighv1-52A0A0A6YXC3 117 aa11.11□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Egr2P08152 470 aa11.11□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Brk1Q91VR8 75 aa11.11□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 GfyJ3KML8 504 aa11.11□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 AngP21570 145 aa11.1□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Rnf114Q9ET26 229 aa11.1□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm21060J3KMU4 56 aa11.1□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Eml5Q8BQM8 1977 aa11.1□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Tmem131O70472 1877 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Trbv16A0A0B4J1H3 115 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Adamts9E9PUN6 1931 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Gm15217A2CG07 155 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Odf1Q61999 247 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Obox8V9GWY9 217 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Ighv1-12A0A0A6YXJ9 117 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Mrpl35Q9CQL6 188 aa11.09□□□□□ -0.63
Pcdha8-201ENSMUST00000194038 Lyrm9Q3UN90 78 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm17359A0A0G2JEB7 487 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 P01753 117 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Rpl39P62892 51 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Ypel4Q65Z93 127 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Fam19a4Q7TPG5 135 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Cep250Q60952 2414 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Crip1P63254 77 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Ndufb4Q9CQC7 129 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 PpdpfQ9CR37 115 aa11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Sptbn1Q62261 2363 aaKnown RBP11.08□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm37988J3QM41 62 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 FancmQ8BGE5 2021 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Parp4E9PYK3 1969 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Igkv4-74A0A0B4J1I3 119 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm7257D3YX25 99 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm20708H3BKF4 155 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Nbl1Q61477 178 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 9230109A22RikQ8BHE6 111 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Trbv13-1A0A0B4J1P8 112 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Znf672Q99LH4 468 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 1700010B08RikQ9DAI7 102 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Cacna1eQ61290 2272 aa11.07□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 P01658 132 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Sslp1Q3UN54 99 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Nop10Q9CQS2 64 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm42674D3YUT9 64 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm17324Q8C6J8 137 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 AcacaQ5SWU9 2345 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Ncor2Q9WU42 2472 aaKnown RBP11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Frem1Q684R7 2191 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 E030018B13RikJ3QMS9 113 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Q99M08 65 aa11.06□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 P01728 117 aa11.05□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm15128A2ADW8 449 aa11.05□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Gm28539A0A087WSL9 92 aa11.05□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 MifP34884 115 aaKnown RBP11.05□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Prp2P05143 317 aa11.05□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Mapk1ip1lQ8BH93 242 aa11.05□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 MyofQ69ZN7 2048 aaKnown RBP11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 OdaphJ3QNT8 126 aa11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Ndufs7Q9DC70 224 aa11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Ccl24Q9JKC0 119 aa11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Armcx4E9PWM3 2356 aa11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Pglyrp1O88593 182 aa11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 CtrlQ9ER05 264 aa11.04□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Trav9-2A0A075B647 113 aa11.03□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Trav9-4A0A0B4J1K2 113 aa11.03□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 BC107364E9Q5A2 140 aa11.03□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Tmem254aP0DN89 123 aa11.03□□□□□ -0.64
Pcdha8-201ENSMUST00000194038 Tmem254bP0DN90 123 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms