RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Gm5878E9PUB3 99 aa5.76□□□□□ -1.49
Bdnf-207ENSMUST00000111047 P04219 140 aa5.76□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Edn3P48299 214 aa5.76□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Snrpd3P62320 126 aaKnown RBP5.76□□□□□ -1.49
Bdnf-207ENSMUST00000111047 3110018I06RikQ9CXS0 120 aa5.76□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Srsf9Q9D0B0 222 aaKnown RBP5.76□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Ighv3-8A0A075B5T0 131 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gm15557A6PWY0 234 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Rnf185Q91YT2 192 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Iah1Q9DB29 249 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Ankhd1E9PUR0 2548 aaKnown RBP5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Prrc2aQ7TSC1 2158 aaKnown RBP5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Trav8-1A0A075B641 109 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Defa26Q3L180 93 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 BB014433Q8C5R5 389 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Tmem14cQ9CQN6 114 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Shisa9Q9CZN4 424 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Pkd1l2Q7TN88 2461 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 SpegQ62407 3262 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Igkv4-57-1A0A075B5M4 119 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Esp4A8R0T8 117 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Vsig4F6TUL9 280 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Olfr312Q7TRZ9 308 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 March3Q8BRX9 218 aa5.75□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Scgb1b24B1B0N6 92 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gpr82Q8BZR0 328 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 A130051J06RikQ8CAU1 227 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Cysltr1Q99JA4 352 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gm3618D3Z4P5 127 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Vamp8O70404 101 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Pla2g2cP48076 150 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Runx1Q03347 451 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Sdhaf1Q3U276 118 aa5.74□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gm17732E9Q5I2 61 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 PkigO70139 76 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 P01739 132 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 P01802 115 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gm1968Q3T9I3 115 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Prr3Q811B5 190 aaKnown RBP5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Xlr5cQ9JJR2 179 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 A0A1Y7VLE6 161 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 P06330 118 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Chac1Q8R3J5 223 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Cdip1Q9DB75 208 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Dido1Q8C9B9 2256 aaKnown RBP5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gm45785A0A1B0GT05 94 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Znf575Q3TXZ1 239 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 CnfnQ6PCW6 111 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Spink10Q8CAC8 162 aa5.73□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Brd3osA0A1B0GRB6 84 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 BlcapP62951 87 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Mllt11P97783 90 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Tal2Q62282 108 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 1700056E22RikF7CNM6 234 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Mrps12O35680 139 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Trav7-2Q5R1I3 112 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Samd10Q7TST3 202 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 PmvkQ9D1G2 192 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Ighv14-1A0A075B5R4 117 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Igkv4-59A0A0B4J1I8 117 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 P01750 117 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Gm10735Q3US96 136 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 AY761184Q9D848 116 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Plac1Q9JI83 173 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 HilpdaQ9JLS0 64 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Snai3Q9QY31 287 aa5.72□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Ighv1-64A0A075B5X3 117 aa5.71□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Fhl1P97447 280 aaKnown RBP5.71□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Uqcrfs1Q9CR68 274 aa5.71□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Rnf114Q9ET26 229 aa5.71□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Sdk1Q3UH53 2193 aa5.71□□□□□ -1.49
Bdnf-207ENSMUST00000111047 Tcrg-C1A0A075B5Z0 172 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv1-82A0A0G2JEU7 117 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 SNORCQ9CXL7 121 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Tcrg-C3L7N479 172 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01741 114 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01820 115 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P03985 172 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm21370Q3T9V6 190 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm10251J3QPM5 127 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01643 108 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Lrcol1Q3URS3 161 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm2916Q9D9B9 127 aa5.71□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv1-50A0A075B5W1 117 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm37988J3QM41 62 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Pip4p1Q3TWL2 284 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm9961Q8BNV2 113 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Mustn1Q99JI1 82 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ash1lQ99MY8 2958 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Pradc1Q9D9N8 188 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Rs1Q9Z1L4 224 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ptpn13Q64512 2453 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 RelnQ60841 3461 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm45717A0A1B0GT68 152 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Olfr313Q5NC55 308 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Olfr311Q5NC59 308 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm29666A0A087WQ99 126 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 2310009B15RikA0A0A6YWI4 143 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 NrepQ07475 68 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm1553Q66VB7 94 aa5.7□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms