RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm28038F7BCN9 126 aa10.52□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Tcf21O35437 179 aa10.52□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Q3UUX7 111 aa10.52□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Smim7Q5RKS2 75 aa10.52□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Zmat5Q9CQR5 170 aa10.52□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Nop10Q9CQS2 64 aa10.52□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Kmt2aP55200 3966 aa10.51□□□□□ -0.73
Ercc1-201ENSMUST00000003645 1810011H11RikE9PVZ2 95 aa10.51□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Cdx1P18111 268 aa10.51□□□□□ -0.73
Ercc1-201ENSMUST00000003645 1500011B03RikQ3TTH7 73 aa10.51□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm11733Q8BQP1 125 aa10.51□□□□□ -0.73
Ercc1-201ENSMUST00000003645 MNCb-2875Q9DCB3 74 aa10.51□□□□□ -0.73
Ercc1-201ENSMUST00000003645 VwfQ8CIZ8 2813 aa10.5□□□□□ -0.73
Ercc1-201ENSMUST00000003645 P01756 117 aa10.5□□□□□ -0.73
Ercc1-201ENSMUST00000003645 P01757 117 aa10.5□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Rnf185Q91YT2 192 aa10.5□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Tmem14cQ9CQN6 114 aa10.5□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm17359A0A0G2JEB7 487 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Omt2bD3YX29 119 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Foxi3E0CZH3 425 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm17349F7BGH6 99 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Pglyrp1O88593 182 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm21748Q3UE70 102 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm9944Q8C559 102 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Olfr984Q8VFN1 314 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Rab4bQ91ZR1 213 aa10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Tppp3Q9CRB6 176 aaKnown RBP10.49□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm6176J3QK59 301 aa10.48□□□□□ -0.73
Ercc1-201ENSMUST00000003645 P01745 121 aa10.48□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm4567Q3UTA8 301 aa10.48□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Urm1Q9D2P4 101 aa10.48□□□□□ -0.73
Ercc1-201ENSMUST00000003645 HampQ9EQ21 83 aa10.48□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Dnah14A0A140LIJ4 4489 aa10.48□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Trav14-3A0A075B607 120 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Trav12d-3A0A075B6A4 115 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm20379A0A087WR34 119 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Ighv8-6A0A0A6YXA3 118 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Mrps12O35680 139 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Gm10509O88255 85 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Cd24P24807 76 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Rab4aP56371 218 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 S100a1P56565 94 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Borcs7Q9CRC6 105 aa10.47□□□□□ -0.73
Ercc1-201ENSMUST00000003645 Trbv13-1A0A0B4J1P8 112 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gm21834J3QN05 151 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gm12888Q3UW77 119 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Foxc1Q61572 553 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Shisa2Q8QZV2 295 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Leap2Q91V13 76 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Tmem239Q9DA47 151 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 CtrlQ9ER05 264 aa10.46□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Trav13d-1A0A075B606 110 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gm17732E9Q5I2 61 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 SriQ6P069 198 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Olfr975Q8VG91 310 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gpx7Q99LJ6 186 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Iah1Q9DB29 249 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 PdfS4R2K0 231 aa10.45□□□□□ -0.74
Ercc1-201ENSMUST00000003645 A730046J19RikA0A1B0GSN8 89 aa10.44□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Klk9Q32M27 251 aa10.44□□□□□ -0.74
Ercc1-201ENSMUST00000003645 BC048562Q80ZQ7 204 aa10.44□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Ndufa3Q9CQ91 84 aa10.44□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Esp38A8R0X1 80 aa10.43□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Vmn1r149E9PWL6 307 aa10.43□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Vmn1r101E9Q365 307 aa10.43□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Scgb2a2J3KMP9 96 aa10.43□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Tmem140Q8BGY5 185 aa10.43□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Q9D131 166 aa10.43□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gm9887F6RFI0 207 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gm20517G3UVU6 152 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Q24JP4 165 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Htr1dQ61224 374 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Mien1Q9CQ86 115 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Mapk1ip1Q9D7G9 263 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Megf8P60882 2789 aa10.42□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Trdv5A0A075B661 115 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Adcyap1O70176 175 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 P01791 123 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Cox17P56394 63 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Tcl1b4P56844 120 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 P84751 237 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Khdc1cQ4KL78 166 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Ss18Q62280 418 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Ormdl3Q9CPZ6 153 aa10.41□□□□□ -0.74
Ercc1-201ENSMUST00000003645 LalbaP29752 143 aa10.4□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Ceacam12Q3UKP4 300 aa10.4□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Gpha2Q925Q5 128 aa10.4□□□□□ -0.74
Ercc1-201ENSMUST00000003645 Ighv6-7A0A0A6YWU3 119 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Zfp930A0A1D5RM15 441 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Gm6040Q4QY32 63 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Trav6-6A0A075B603 114 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Gm5157A0A087WRH8 301 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Trav3n-3A0A0G2JEM0 114 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 P06334 169 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Dad1P61804 113 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Arl14eplQ3UKZ7 152 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 A530064D06RikQ8BNV8 229 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Q8CF25 301 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Cysltr1Q99JA4 352 aa10.39□□□□□ -0.75
Ercc1-201ENSMUST00000003645 Higd2aQ9CQJ1 106 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 56.3 ms