RNA–Protein interactions for RNA: snR190

snR190, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR190, Length 190 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR190snR190 KGD2P19262 463 aaPredicted RBP1.21□□□□□ -2.22
snR190snR190 AIM17P23180 465 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 YCR061WP25639 631 aa1.21□□□□□ -2.22
snR190snR190 PRP45P28004 379 aaPredicted RBP1.21□□□□□ -2.22
snR190snR190 ATO2P32907 282 aa1.21□□□□□ -2.22
snR190snR190 RPT3P33298 428 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 LNP1P38878 278 aa1.21□□□□□ -2.22
snR190snR190 FLO5P38894 1075 aa1.21□□□□□ -2.22
snR190snR190 UBP12P39538 1254 aa1.21□□□□□ -2.22
snR190snR190 VPS8P39702 1274 aa1.21□□□□□ -2.22
snR190snR190 SSP120P39931 234 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 SAP1P39955 897 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 CIN1P40987 1014 aa1.21□□□□□ -2.22
snR190snR190 NOP2P40991 618 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 MAF1P41910 395 aa1.21□□□□□ -2.22
snR190snR190 GSM1P42950 618 aa1.21□□□□□ -2.22
snR190snR190 IDS2P46958 469 aa1.21□□□□□ -2.22
snR190snR190 MDV1P47025 714 aa1.21□□□□□ -2.22
snR190snR190 LYS20P48570 428 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 SLD3P53135 668 aa1.21□□□□□ -2.22
snR190snR190 YGL081WP53156 320 aa1.21□□□□□ -2.22
snR190snR190 HOL1P53389 586 aa1.21□□□□□ -2.22
snR190snR190 UBP16Q02863 499 aa1.21□□□□□ -2.22
snR190snR190 ECM38Q05902 660 aaPredicted RBP1.21□□□□□ -2.22
snR190snR190 PEX15Q08215 383 aa1.21□□□□□ -2.22
snR190snR190 TRE2Q08693 809 aa1.21□□□□□ -2.22
snR190snR190 BUD7Q08754 746 aa1.21□□□□□ -2.22
snR190snR190 YOR389WQ08912 624 aa1.21□□□□□ -2.22
snR190snR190 NEW1Q08972 1196 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 DIN7Q12086 430 aa1.21□□□□□ -2.22
snR190snR190 LYS21Q12122 440 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 PSF3Q12146 194 aa1.21□□□□□ -2.22
snR190snR190 GET3Q12154 354 aaKnown RBP1.21□□□□□ -2.22
snR190snR190 HOS1Q12214 470 aa1.21□□□□□ -2.22
snR190snR190 SES1P07284 462 aaKnown RBP1.2□□□□□ -2.22
snR190snR190 PRE2P30656 287 aaKnown RBP1.2□□□□□ -2.22
snR190snR190 HEM12P32347 362 aaPredicted RBP1.2□□□□□ -2.22
snR190snR190 GCS1P35197 352 aa1.2□□□□□ -2.22
snR190snR190 YBR071WP38243 211 aa1.2□□□□□ -2.22
snR190snR190 GND1P38720 489 aaKnown RBP1.2□□□□□ -2.22
snR190snR190 TOM71P38825 639 aaKnown RBP1.2□□□□□ -2.22
snR190snR190 ARO9P38840 513 aaPredicted RBP1.2□□□□□ -2.22
snR190snR190 ERV46P39727 415 aa1.2□□□□□ -2.22
snR190snR190 EMP65P40085 556 aa1.2□□□□□ -2.22
snR190snR190 YIL152WP40455 235 aa1.2□□□□□ -2.22
snR190snR190 YIR016WP40572 265 aa1.2□□□□□ -2.22
snR190snR190 AAT1Q01802 451 aa1.2□□□□□ -2.22
snR190snR190 VTC3Q02725 835 aa1.2□□□□□ -2.22
snR190snR190 TRS31Q03337 283 aa1.2□□□□□ -2.22
snR190snR190 ARA2Q04212 335 aa1.2□□□□□ -2.22
snR190snR190 YML053CQ04978 212 aa1.2□□□□□ -2.22
snR190snR190 SNA4Q07549 140 aa1.2□□□□□ -2.22
snR190snR190 YDL242WQ07746 117 aa1.2□□□□□ -2.22
snR190snR190 SRL1Q08673 210 aa1.2□□□□□ -2.22
snR190snR190 PFA4Q12006 378 aa1.2□□□□□ -2.22
snR190snR190 PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
snR190snR190 DBP10Q12389 995 aaKnown RBP1.2□□□□□ -2.22
snR190snR190 YER175W-AQ8TGU4 54 aa1.2□□□□□ -2.22
snR190snR190 KAR1P11927 433 aa1.19□□□□□ -2.22
snR190snR190 SEC18P18759 758 aaKnown RBP1.19□□□□□ -2.22
snR190snR190 CNA1P23287 553 aa1.19□□□□□ -2.22
snR190snR190 RPS7AP26786 190 aaKnown RBP1.19□□□□□ -2.22
snR190snR190 GSH1P32477 678 aa1.19□□□□□ -2.22
snR190snR190 ENP1P38333 483 aaKnown RBP1.19□□□□□ -2.22
snR190snR190 ERC1P38767 581 aa1.19□□□□□ -2.22
snR190snR190 YAT2P40017 923 aa1.19□□□□□ -2.22
snR190snR190 ARB1P40024 610 aaKnown RBP1.19□□□□□ -2.22
snR190snR190 YEN1P40028 759 aa1.19□□□□□ -2.22
snR190snR190 VFA1P40080 203 aa1.19□□□□□ -2.22
snR190snR190 UBP7P40453 1071 aa1.19□□□□□ -2.22
snR190snR190 POL31P46957 487 aa1.19□□□□□ -2.22
snR190snR190 BOP3P53958 396 aa1.19□□□□□ -2.22
snR190snR190 COG6P53959 839 aa1.19□□□□□ -2.22
snR190snR190 DOS2P54858 310 aa1.19□□□□□ -2.22
snR190snR190 YAT1P80235 687 aa1.19□□□□□ -2.22
snR190snR190 CRF1Q04930 467 aa1.19□□□□□ -2.22
snR190snR190 TRI1Q05024 226 aa1.19□□□□□ -2.22
snR190snR190 DSE3Q08729 430 aa1.19□□□□□ -2.22
snR190snR190 YPL191CQ08930 360 aa1.19□□□□□ -2.22
snR190snR190 ATX2Q12067 313 aa1.19□□□□□ -2.22
snR190snR190 SLX4Q12098 748 aa1.19□□□□□ -2.22
snR190snR190 UBX3Q12229 455 aa1.19□□□□□ -2.22
snR190snR190 TMA17Q12513 150 aa1.19□□□□□ -2.22
snR190snR190 CTT1P06115 562 aa1.18□□□□□ -2.22
snR190snR190 ILV2P07342 687 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 VAS1P07806 1104 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 PHO3P24031 467 aa1.18□□□□□ -2.22
snR190snR190 YCR043CP25361 127 aa1.18□□□□□ -2.22
snR190snR190 TFC4P33339 1025 aa1.18□□□□□ -2.22
snR190snR190 TGL1P34163 548 aa1.18□□□□□ -2.22
snR190snR190 RPF2P36160 344 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 SCO2P38072 301 aa1.18□□□□□ -2.22
snR190snR190 TAF5P38129 798 aa1.18□□□□□ -2.22
snR190snR190 ARC40P38328 384 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 VBA2P38358 474 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 ARN1P38731 627 aa1.18□□□□□ -2.22
snR190snR190 YLF2P38746 405 aa1.18□□□□□ -2.22
snR190snR190 CCT4P39078 528 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 SCS2P40075 244 aaKnown RBP1.18□□□□□ -2.22
snR190snR190 YJL107CP42947 387 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 144.5 ms