RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	EFR3	Q03653	782 aa	Known RBP	2.58	□□□□□ -2
TOP2	YNL088W	GTO3	Q04806	366 aa		2.58	□□□□□ -2
TOP2	YNL088W	RBS1	Q05672	457 aa	Known RBP	2.58	□□□□□ -2
TOP2	YNL088W	GMC2	Q06201	188 aa		2.58	□□□□□ -2
TOP2	YNL088W	FMP45	Q07651	309 aa		2.58	□□□□□ -2
TOP2	YNL088W	HBT1	Q07653	1046 aa	Known RBP	2.58	□□□□□ -2
TOP2	YNL088W	CMS1	Q07897	291 aa	Known RBP	2.58	□□□□□ -2
TOP2	YNL088W	TUM1	Q08686	304 aa	Known RBP	2.58	□□□□□ -2
TOP2	YNL088W	RPN5	Q12250	445 aa	Known RBP	2.58	□□□□□ -2
TOP2	YNL088W	YOL159C-A	Q3E769	90 aa		2.58	□□□□□ -2
TOP2	YNL088W	SEC53	P07283	254 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	TRK1	P12685	1235 aa		2.57	□□□□□ -2
TOP2	YNL088W	MSD1	P15179	658 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	ADP1	P25371	1049 aa		2.57	□□□□□ -2
TOP2	YNL088W	PEP3	P27801	918 aa		2.57	□□□□□ -2
TOP2	YNL088W	SAC6	P32599	642 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	IFA38	P38286	347 aa		2.57	□□□□□ -2
TOP2	YNL088W	PSD1	P39006	500 aa		2.57	□□□□□ -2
TOP2	YNL088W	PXR1	P53335	271 aa	Predicted RBP	2.57	□□□□□ -2
TOP2	YNL088W	HDA1	P53973	706 aa		2.57	□□□□□ -2
TOP2	YNL088W	NHX1	Q04121	633 aa		2.57	□□□□□ -2
TOP2	YNL088W	SKG3	Q06315	1026 aa		2.57	□□□□□ -2
TOP2	YNL088W	ATG17	Q06410	417 aa		2.57	□□□□□ -2
TOP2	YNL088W	YOR296W	Q08748	1289 aa		2.57	□□□□□ -2
TOP2	YNL088W	GET3	Q12154	354 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	ZRT2	Q12436	422 aa		2.57	□□□□□ -2
TOP2	YNL088W	SKM1	Q12469	655 aa		2.57	□□□□□ -2
TOP2	YNL088W	FLP1	P03870	423 aa		2.57	□□□□□ -2
TOP2	YNL088W	RPS21A	P0C0V8	87 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	YAK1	P14680	807 aa		2.57	□□□□□ -2
TOP2	YNL088W	SEC62	P21825	274 aa		2.57	□□□□□ -2
TOP2	YNL088W	TRK2	P28584	889 aa		2.57	□□□□□ -2
TOP2	YNL088W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
TOP2	YNL088W	SEC31	P38968	1273 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	STT3	P39007	718 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	PUG1	P40100	303 aa		2.57	□□□□□ -2
TOP2	YNL088W	ULP2	P40537	1034 aa	Predicted RBP	2.57	□□□□□ -2
TOP2	YNL088W	SAM50	P53969	484 aa		2.57	□□□□□ -2
TOP2	YNL088W	CSI1	Q04368	295 aa		2.57	□□□□□ -2
TOP2	YNL088W	GIM5	Q04493	163 aa		2.57	□□□□□ -2
TOP2	YNL088W	CRF1	Q04930	467 aa		2.57	□□□□□ -2
TOP2	YNL088W	MSC3	Q05812	728 aa		2.57	□□□□□ -2
TOP2	YNL088W	ATG33	Q06485	197 aa		2.57	□□□□□ -2
TOP2	YNL088W	OMS1	Q06668	471 aa		2.57	□□□□□ -2
TOP2	YNL088W	YPR071W	Q12346	211 aa		2.57	□□□□□ -2
TOP2	YNL088W	YDL206W	Q12424	762 aa		2.57	□□□□□ -2
TOP2	YNL088W	ECM5	Q03214	1411 aa		2.57	□□□□□ -2
TOP2	YNL088W	YLL067C	Q07888	1374 aa		2.57	□□□□□ -2
TOP2	YNL088W	TRP3	P00937	484 aa		2.57	□□□□□ -2
TOP2	YNL088W	PHO3	P24031	467 aa		2.57	□□□□□ -2
TOP2	YNL088W	DPB2	P24482	689 aa	Predicted RBP	2.57	□□□□□ -2
TOP2	YNL088W	AFG2	P32794	780 aa		2.57	□□□□□ -2
TOP2	YNL088W	SQT1	P35184	431 aa		2.57	□□□□□ -2
TOP2	YNL088W	ADE17	P38009	592 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	YIL092W	P40497	633 aa		2.57	□□□□□ -2
TOP2	YNL088W	GPD1	Q00055	391 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	YHM2	Q04013	314 aa		2.57	□□□□□ -2
TOP2	YNL088W	ARP10	Q04549	284 aa		2.57	□□□□□ -2
TOP2	YNL088W	GFD1	Q04839	188 aa	Known RBP	2.57	□□□□□ -2
TOP2	YNL088W	SEC10	Q06245	871 aa		2.57	□□□□□ -2
TOP2	YNL088W	YOR238W	Q08634	303 aa		2.57	□□□□□ -2
TOP2	YNL088W	MCH5	Q08777	521 aa		2.57	□□□□□ -2
TOP2	YNL088W	YDL109C	Q12103	647 aa		2.57	□□□□□ -2
TOP2	YNL088W	RPP2B	P02400	110 aa	Known RBP	2.56	□□□□□ -2
TOP2	YNL088W	CLB3	P24870	427 aa		2.56	□□□□□ -2
TOP2	YNL088W	GID7	P25569	745 aa		2.56	□□□□□ -2
TOP2	YNL088W	TGL1	P34163	548 aa		2.56	□□□□□ -2
TOP2	YNL088W	ERC1	P38767	581 aa		2.56	□□□□□ -2
TOP2	YNL088W	RLP7	P40693	322 aa	Known RBP	2.56	□□□□□ -2
TOP2	YNL088W	RSM26	P47141	266 aa		2.56	□□□□□ -2
TOP2	YNL088W	CTF18	P49956	741 aa		2.56	□□□□□ -2
TOP2	YNL088W	ALT2	P52892	507 aa		2.56	□□□□□ -2
TOP2	YNL088W	NOP15	P53927	220 aa	Predicted RBP	2.56	□□□□□ -2
TOP2	YNL088W	YLR297W	Q05899	129 aa		2.56	□□□□□ -2
TOP2	YNL088W	VPS38	Q05919	439 aa		2.56	□□□□□ -2
TOP2	YNL088W	YLR173W	Q06247	608 aa		2.56	□□□□□ -2
TOP2	YNL088W	MED4	Q12343	284 aa		2.56	□□□□□ -2
TOP2	YNL088W	STE12	P13574	688 aa		2.56	□□□□□ -2
TOP2	YNL088W	PRP16	P15938	1071 aa	Predicted RBP	2.56	□□□□□ -2
TOP2	YNL088W	MRPL33	P20084	86 aa		2.56	□□□□□ -2
TOP2	YNL088W	CLB4	P24871	460 aa		2.56	□□□□□ -2
TOP2	YNL088W	ZUO1	P32527	433 aa	Known RBP	2.56	□□□□□ -2
TOP2	YNL088W	YHR202W	P38887	602 aa		2.56	□□□□□ -2
TOP2	YNL088W	REV7	P38927	245 aa		2.56	□□□□□ -2
TOP2	YNL088W	LYS9	P38999	446 aa		2.56	□□□□□ -2
TOP2	YNL088W	CAF16	P43569	289 aa		2.56	□□□□□ -2
TOP2	YNL088W	MRX6	P48564	524 aa		2.56	□□□□□ -2
TOP2	YNL088W	ECM22	Q05958	814 aa	Predicted RBP	2.56	□□□□□ -2
TOP2	YNL088W	YLR455W	Q06188	304 aa		2.56	□□□□□ -2
TOP2	YNL088W	HDA2	Q06629	674 aa		2.56	□□□□□ -2
TOP2	YNL088W	GUP2	Q08929	609 aa		2.56	□□□□□ -2
TOP2	YNL088W	YOL107W	Q12239	342 aa		2.56	□□□□□ -2
TOP2	YNL088W	MET3	P08536	511 aa		2.56	□□□□□ -2
TOP2	YNL088W	UTR1	P21373	530 aa		2.56	□□□□□ -2
TOP2	YNL088W	BUD5	P25300	642 aa	Predicted RBP	2.56	□□□□□ -2
TOP2	YNL088W	ICL1	P28240	557 aa	Predicted RBP	2.56	□□□□□ -2
TOP2	YNL088W	ATP11	P32453	318 aa		2.56	□□□□□ -2
TOP2	YNL088W	PET10	P36139	283 aa		2.56	□□□□□ -2
TOP2	YNL088W	YMR262W	P38430	313 aa		2.56	□□□□□ -2
TOP2	YNL088W	FLC2	P39719	783 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms