RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W IMA5P40884 581 aa4.38□□□□□ -1.71
SMD2YLR275W CIR1P42940 261 aa4.38□□□□□ -1.71
SMD2YLR275W ASK10P48361 1146 aa4.38□□□□□ -1.71
SMD2YLR275W ACS1Q01574 713 aa4.38□□□□□ -1.71
SMD2YLR275W LCB4Q12246 624 aa4.38□□□□□ -1.71
SMD2YLR275W YER175W-AQ8TGU4 54 aa4.38□□□□□ -1.71
SMD2YLR275W RRP43P25359 394 aaPredicted RBP4.37□□□□□ -1.71
SMD2YLR275W ECM32P32644 1121 aaKnown RBP4.37□□□□□ -1.71
SMD2YLR275W ARO9P38840 513 aaPredicted RBP4.37□□□□□ -1.71
SMD2YLR275W VPS8P39702 1274 aa4.37□□□□□ -1.71
SMD2YLR275W YNL058CP53947 316 aa4.37□□□□□ -1.71
SMD2YLR275W PLM2Q04383 521 aa4.37□□□□□ -1.71
SMD2YLR275W CRF1Q04930 467 aa4.37□□□□□ -1.71
SMD2YLR275W CRD1Q07560 283 aa4.37□□□□□ -1.71
SMD2YLR275W YDL242WQ07746 117 aa4.37□□□□□ -1.71
SMD2YLR275W Q0010Q9ZZX9 128 aa4.37□□□□□ -1.71
SMD2YLR275W KGD2P19262 463 aaPredicted RBP4.36□□□□□ -1.71
SMD2YLR275W SAP1P39955 897 aaKnown RBP4.36□□□□□ -1.71
SMD2YLR275W TGL2P54857 326 aa4.36□□□□□ -1.71
SMD2YLR275W AAT1Q01802 451 aa4.36□□□□□ -1.71
SMD2YLR275W VPS64Q03944 604 aa4.36□□□□□ -1.71
SMD2YLR275W YML053CQ04978 212 aa4.36□□□□□ -1.71
SMD2YLR275W AAD4Q07747 329 aa4.36□□□□□ -1.71
SMD2YLR275W FTH1P38310 465 aa4.35□□□□□ -1.71
SMD2YLR275W ARB1P40024 610 aaKnown RBP4.35□□□□□ -1.71
SMD2YLR275W IRC7P43623 340 aa4.35□□□□□ -1.71
SMD2YLR275W CEG1Q01159 459 aaPredicted RBP4.35□□□□□ -1.71
SMD2YLR275W SND1Q04007 877 aa4.35□□□□□ -1.71
SMD2YLR275W CRC1Q12289 327 aa4.35□□□□□ -1.71
SMD2YLR275W ARP7Q12406 477 aa4.35□□□□□ -1.71
SMD2YLR275W CET1O13297 549 aaPredicted RBP4.34□□□□□ -1.71
SMD2YLR275W YMR085WP0CF18 432 aa4.34□□□□□ -1.71
SMD2YLR275W YAP1P19880 650 aaKnown RBP4.34□□□□□ -1.71
SMD2YLR275W NIC96P34077 839 aa4.34□□□□□ -1.71
SMD2YLR275W KES1P35844 434 aaKnown RBP4.34□□□□□ -1.71
SMD2YLR275W MNT3P40549 630 aa4.34□□□□□ -1.71
SMD2YLR275W MPS1P54199 764 aa4.34□□□□□ -1.71
SMD2YLR275W MPD2Q99316 277 aa4.34□□□□□ -1.71
SMD2YLR275W RTC1Q08281 1341 aa4.34□□□□□ -1.71
SMD2YLR275W MAK32P23060 363 aa4.33□□□□□ -1.72
SMD2YLR275W IMD2P38697 523 aaKnown RBP4.33□□□□□ -1.72
SMD2YLR275W JHD1P40034 492 aa4.33□□□□□ -1.72
SMD2YLR275W IMD3P50095 523 aaKnown RBP4.33□□□□□ -1.72
SMD2YLR275W PEX8P53248 589 aa4.33□□□□□ -1.72
SMD2YLR275W SNU56Q03782 492 aaKnown RBP4.33□□□□□ -1.72
SMD2YLR275W RAD34Q06665 692 aa4.33□□□□□ -1.72
SMD2YLR275W AIM6Q07716 390 aa4.33□□□□□ -1.72
SMD2YLR275W GEP3Q08622 556 aa4.33□□□□□ -1.72
SMD2YLR275W YOR389WQ08912 624 aa4.33□□□□□ -1.72
SMD2YLR275W TMA7Q3E764 64 aaKnown RBP4.33□□□□□ -1.72
SMD2YLR275W NOP2P40991 618 aaKnown RBP4.32□□□□□ -1.72
SMD2YLR275W ESF2P53743 316 aaKnown RBP4.32□□□□□ -1.72
SMD2YLR275W SES1P07284 462 aaKnown RBP4.31□□□□□ -1.72
SMD2YLR275W ILS1P09436 1072 aaKnown RBP4.31□□□□□ -1.72
SMD2YLR275W RPF2P36160 344 aaKnown RBP4.31□□□□□ -1.72
SMD2YLR275W YIL024CP40543 189 aa4.31□□□□□ -1.72
SMD2YLR275W CIN1P40987 1014 aa4.31□□□□□ -1.72
SMD2YLR275W MAD3P47074 515 aa4.31□□□□□ -1.72
SMD2YLR275W YPL191CQ08930 360 aa4.31□□□□□ -1.72
SMD2YLR275W LYS21Q12122 440 aaKnown RBP4.31□□□□□ -1.72
SMD2YLR275W PDE1P22434 369 aa4.3□□□□□ -1.72
SMD2YLR275W COQ3P27680 312 aa4.3□□□□□ -1.72
SMD2YLR275W SIP1P32578 815 aa4.3□□□□□ -1.72
SMD2YLR275W VBA2P38358 474 aaKnown RBP4.3□□□□□ -1.72
SMD2YLR275W SPC97P38863 823 aa4.3□□□□□ -1.72
SMD2YLR275W PCI8P40512 444 aa4.3□□□□□ -1.72
SMD2YLR275W CFD1P40558 293 aa4.3□□□□□ -1.72
SMD2YLR275W COP1P53622 1201 aaKnown RBP4.3□□□□□ -1.72
SMD2YLR275W YAT1P80235 687 aa4.3□□□□□ -1.72
SMD2YLR275W YOL114CQ12322 202 aa4.3□□□□□ -1.72
SMD2YLR275W SST2P11972 698 aaKnown RBP4.29□□□□□ -1.72
SMD2YLR275W SWC3P31376 625 aa4.29□□□□□ -1.72
SMD2YLR275W FRD1P32614 470 aaKnown RBP4.29□□□□□ -1.72
SMD2YLR275W TOM20P35180 183 aa4.29□□□□□ -1.72
SMD2YLR275W ERC1P38767 581 aa4.29□□□□□ -1.72
SMD2YLR275W STT3P39007 718 aaKnown RBP4.29□□□□□ -1.72
SMD2YLR275W YPL068CQ02749 293 aa4.29□□□□□ -1.72
SMD2YLR275W CIR2Q08822 631 aa4.29□□□□□ -1.72
SMD2YLR275W YBR255C-AQ3E776 120 aa4.29□□□□□ -1.72
SMD2YLR275W YPR089WO13585 888 aa4.28□□□□□ -1.72
SMD2YLR275W ILV2P07342 687 aaKnown RBP4.28□□□□□ -1.72
SMD2YLR275W ASK1P35734 292 aa4.28□□□□□ -1.72
SMD2YLR275W YKL133CP36066 463 aa4.28□□□□□ -1.72
SMD2YLR275W SCW4P53334 386 aaKnown RBP4.28□□□□□ -1.72
SMD2YLR275W TEP1P53916 434 aa4.28□□□□□ -1.72
SMD2YLR275W ICL2Q12031 575 aa4.28□□□□□ -1.72
SMD2YLR275W SIR1P21691 654 aa4.27□□□□□ -1.73
SMD2YLR275W YMR124WP39523 943 aaKnown RBP4.27□□□□□ -1.73
SMD2YLR275W ERV46P39727 415 aa4.27□□□□□ -1.73
SMD2YLR275W CAB2P40506 365 aa4.27□□□□□ -1.73
SMD2YLR275W YPL108WQ02872 168 aaPredicted RBP4.27□□□□□ -1.73
SMD2YLR275W GET3Q12154 354 aaKnown RBP4.27□□□□□ -1.73
SMD2YLR275W YER190C-BP0CX94 160 aa4.26□□□□□ -1.73
SMD2YLR275W YEL077W-AP0CX95 160 aa4.26□□□□□ -1.73
SMD2YLR275W YGR296C-BP0CX96 160 aa4.26□□□□□ -1.73
SMD2YLR275W YPL283W-BP0CX97 160 aa4.26□□□□□ -1.73
SMD2YLR275W YPR204C-AP0CX98 160 aa4.26□□□□□ -1.73
SMD2YLR275W GSH1P32477 678 aa4.26□□□□□ -1.73
SMD2YLR275W GRX7P38068 203 aa4.26□□□□□ -1.73
SMD2YLR275W NPA3P47122 385 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 137.3 ms