RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM22	YLR228C	ZRG8	P40021	1076 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	UBP7	P40453	1071 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	QDR2	P40474	542 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	YNL115C	P53925	644 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	TDA9	Q04545	1251 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	YMR226C	Q05016	267 aa	Known RBP	4.09	□□□□□ -1.76
ECM22	YLR228C	RSC3	Q06639	885 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	ASA1	Q06822	443 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	MCH5	Q08777	521 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	RCN2	Q12044	265 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	ATG11	Q12527	1178 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	AI5_ALPHA	Q9ZZX1	630 aa		4.09	□□□□□ -1.76
ECM22	YLR228C	YLR278C	Q05854	1341 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	UTP10	P42945	1769 aa	Known RBP	4.08	□□□□□ -1.76
ECM22	YLR228C	YLR462W	O13556	202 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	CDC19	P00549	500 aa	Known RBP	4.08	□□□□□ -1.76
ECM22	YLR228C	RPS3	P05750	240 aa	Known RBP	4.08	□□□□□ -1.76
ECM22	YLR228C	ALG1	P16661	449 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	EXO70	P19658	623 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	MRPL33	P20084	86 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	ISY1	P21374	235 aa	Predicted RBP	4.08	□□□□□ -1.76
ECM22	YLR228C	DBF2	P22204	572 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	PXA2	P34230	853 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	UIP5	P36137	443 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	RDH54	P38086	958 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	ECM31	P38122	312 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	ERG7	P38604	731 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	YHL049C	P38722	271 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	YHR078W	P38799	552 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	YEL075C	P39972	122 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	YER189W	P40104	122 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	PFK26	P40433	827 aa	Known RBP	4.08	□□□□□ -1.76
ECM22	YLR228C	YFL064C	P43540	174 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	BPL1	P48445	690 aa	Predicted RBP	4.08	□□□□□ -1.76
ECM22	YLR228C	YGR021W	P53212	290 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	BSC5	P53755	489 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	VAC7	P53950	1165 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	ORC4	P54791	529 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	GCN5	Q03330	439 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	BRE4	Q07660	1125 aa		4.08	□□□□□ -1.76
ECM22	YLR228C	CTT1	P06115	562 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YGL041W-A	P0C5N3	154 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	STF2	P16965	84 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	NUP2	P32499	720 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	KTR2	P33550	425 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	MDJ1	P35191	511 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	LRG1	P35688	1017 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YBR225W	P38321	900 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	VHC1	P38329	1120 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	RCK2	P38623	610 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	RRF1	P38771	230 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	SEO1	P39709	593 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	PSF2	P40359	213 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YJL070C	P40361	888 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YIL077C	P40508	320 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	PCI8	P40512	444 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	PEF1	P53238	335 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	COG2	P53271	262 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	MRPL13	Q02204	264 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YMR010W	Q03687	405 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YPR078C	Q06813	372 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YLL007C	Q07799	665 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	ICL2	Q12031	575 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	SSF2	Q12153	453 aa	Predicted RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	LDB17	Q12342	491 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	RTR2	Q12378	196 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	FMP16	Q12497	93 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	RPS17A	P02407	136 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	KAR1	P11927	433 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	RPS17B	P14127	136 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	GFD2	P25370	566 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	KIP2	P28743	706 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	TEF4	P36008	412 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	RRN3	P36070	627 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	MET1	P36150	593 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	NAT2	P37293	288 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	TDP1	P38319	544 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	SLX1	P38324	304 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	YBR285W	P38354	144 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	CRG1	P38892	291 aa	RIP-Chip data	4.07	□□□□□ -1.76	not detected
ECM22	YLR228C	EDC3	P39998	551 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	IES5	P40060	125 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	COG5	P53951	403 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	INA17	Q02888	182 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	NAN1	Q02931	896 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	PRP42	Q03776	544 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	RVB1	Q03940	463 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	COQ9	Q05779	260 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	TDA5	Q06417	326 aa	Known RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	YPR196W	Q06595	470 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	IWR1	Q07532	353 aa	Predicted RBP	4.07	□□□□□ -1.76
ECM22	YLR228C	TRE1	Q08919	783 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	FLC1	Q08967	793 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	MED2	Q12124	431 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	ATG31	Q12421	196 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	NSI1	Q12457	570 aa		4.07	□□□□□ -1.76
ECM22	YLR228C	URA3	P03962	267 aa		4.06	□□□□□ -1.76
ECM22	YLR228C	THS1	P04801	734 aa	Known RBP	4.06	□□□□□ -1.76
ECM22	YLR228C	PUT2	P07275	575 aa		4.06	□□□□□ -1.76
ECM22	YLR228C	CUP1-1	P0CX80	61 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms