RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	SUL2	Q12325	893 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	TRM13	Q12383	476 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	HIR3	P47171	1648 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	PCK1	P10963	549 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	POL3	P15436	1097 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	SEC15	P22224	910 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	BEM3	P32873	1128 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	OAR1	P35731	278 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	DJP1	P40564	432 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	YPL108W	Q02872	168 aa	Predicted RBP	1.61	□□□□□ -2.15
SMC4	YLR086W	VCX1	Q99385	411 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	WHI2	P12611	486 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	PMA2	P19657	947 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	ILV6	P25605	309 aa	Known RBP	1.61	□□□□□ -2.15
SMC4	YLR086W	SWC3	P31376	625 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	ARP2	P32381	391 aa	Known RBP	1.61	□□□□□ -2.15
SMC4	YLR086W	HES1	P35843	434 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	APL3	P38065	1025 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	MAM1	P40065	302 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	YNL195C	P40168	261 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	OPT1	P40897	799 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	TDA10	P42938	290 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	ASE1	P50275	885 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	SAP4	P53036	818 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	YGR151C	P53287	111 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	CPR8	P53728	308 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	ATG21	Q02887	496 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	VPS13	Q07878	3144 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	ESP1	Q03018	1630 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	OLE1	P21147	510 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	PDE1	P22434	369 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	CLB4	P24871	460 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	RNQ1	P25367	405 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	FUB1	P25659	250 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	RPN12	P32496	274 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	PAH1	P32567	862 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	ESL1	P40456	1118 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	NDC80	P40460	691 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	IRC6	P43615	237 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	CTR1	P49573	406 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	YGL117W	P53133	265 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	YNL092W	P53934	400 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	ACS1	Q01574	713 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	MTG1	Q03151	367 aa	Predicted RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	MUB1	Q03162	620 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	YDL086W	Q07505	273 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	TRM3	Q07527	1436 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	GEA2	P39993	1459 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	BUD3	P25558	1636 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	RPS9B	P05755	195 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	YML003W	P0CF16	290 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	PET122	P10355	254 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	URK1	P27515	501 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	MVD1	P32377	396 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	GMH1	P36125	273 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	AAP1	P37898	856 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	YMC2	P38087	329 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	FLC2	P39719	783 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	MSY1	P48527	492 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	COQ6	P53318	479 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	TRM8	Q12009	286 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	1.6	□□□□□ -2.15	not detected
SMC4	YLR086W	LCB4	Q12246	624 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	PRS5	Q12265	496 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	SEC18	P18759	758 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	CAD1	P24813	409 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	CHS3	P29465	1165 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	PDB1	P32473	366 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	SRB5	P32585	307 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	SET3	P36124	751 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	GLG1	P36143	616 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	PIH1	P38768	344 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	NOC2	P39744	710 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	TMN3	P40071	706 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	TMA108	P40462	946 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	ERR3	P42222	437 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	AVT1	P47082	602 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	SGM1	P47166	707 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	PHO23	P50947	330 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	RRT6	P53117	311 aa	Predicted RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	NGL2	Q03264	515 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	GFD1	Q04839	188 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	Q0010	Q9ZZX9	128 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	POL1	P13382	1468 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	ADE3	P07245	946 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	MRP7	P12687	371 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	SRP54	P20424	541 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	RIT1	P23796	513 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	KES1	P35844	434 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	EHT1	P38295	451 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	AXL2	P38928	823 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	IST3	P40565	148 aa	Predicted RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	CCT7	P42943	550 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	SPN1	Q06505	410 aa	Predicted RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	TSR2	Q06672	205 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	YDR056C	Q12025	205 aa		1.6	□□□□□ -2.15
SMC4	YLR086W	NOP58	Q12499	511 aa	Known RBP	1.6	□□□□□ -2.15
SMC4	YLR086W	CAT8	P39113	1433 aa		1.59	□□□□□ -2.15
SMC4	YLR086W	CFT1	Q06632	1357 aa	Known RBP	1.59	□□□□□ -2.15
SMC4	YLR086W	CET1	O13297	549 aa	Predicted RBP	1.59	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms