RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	MFB1	Q04922	465 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	GRS2	Q06817	618 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	GRX6	Q12438	231 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	RPI1	P23250	407 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	SBA1	P28707	216 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	SAC6	P32599	642 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	GDH2	P33327	1092 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	RMA1	P36001	430 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	NUP133	P36161	1157 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	BZZ1	P38822	633 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	CKB2	P38930	258 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	YEL023C	P39992	682 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	RTR1	P40084	226 aa	Predicted RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	LCB2	P40970	561 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	MON1	P53129	644 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	MUK1	Q02866	612 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	FCP1	Q03254	732 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	YPD1	Q07688	167 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	RAD9	P14737	1309 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	FUS1	P11710	512 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	PRP16	P15938	1071 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	SGF29	P25554	259 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	TRK2	P28584	889 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	YKU70	P32807	602 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	SSO1	P32867	290 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	MCD4	P36051	919 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	YHL017W	P38745	532 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	YER010C	P40011	234 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	VMA13	P41807	478 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	OTU1	P43558	301 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	YGL117W	P53133	265 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	IPI3	P53877	555 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NUP133	YKR082W	ECM38	Q05902	660 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	YDL144C	Q07589	356 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	PEX15	Q08215	383 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	TMA46	Q12000	345 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	ULA1	Q12059	462 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	LAM4	P38800	1345 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	RPP2B	P02400	110 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NUP133	YKR082W	MET17	P06106	444 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	SSC1	P0CS90	654 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	RPL19A	P0CX82	189 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	RPL19B	P0CX83	189 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	STE13	P33894	931 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	CHK1	P38147	527 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	SWC5	P38326	303 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	YHL008C	P38750	627 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	ALK1	P43633	760 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	DLD2	P46681	530 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	GCD14	P46959	383 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	SPH1	Q06160	661 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	CMS1	Q07897	291 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	TRM8	Q12009	286 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	SNF2	P22082	1703 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	BI4	P03879	638 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	LEU2	P04173	364 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	HXK2	P04807	486 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	ARG3	P05150	338 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	RSR1	P13856	272 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	NAM9	P27929	486 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	KSP1	P38691	1029 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	YJR096W	P47137	282 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	RMR1	P53060	241 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	YGL242C	P53066	181 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	CAF130	P53280	1122 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	MOT3	P54785	490 aa	Known RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	BET4	Q00618	327 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	VID22	Q05934	901 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	PML1	Q07930	204 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP133	YKR082W	DSE3	Q08729	430 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	ACF2	Q12168	779 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	PCD1	Q12524	340 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	ISN1	Q99312	450 aa		4.18	□□□□□ -1.74
NUP133	YKR082W	TRP3	P00937	484 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	GCR1	P07261	785 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	MSS116	P15424	664 aa	Known RBP	4.17	□□□□□ -1.74
NUP133	YKR082W	YCL049C	P25577	312 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	SYP1	P25623	870 aa	Known RBP	4.17	□□□□□ -1.74
NUP133	YKR082W	MCM5	P29496	775 aa	Known RBP	4.17	□□□□□ -1.74
NUP133	YKR082W	MLS1	P30952	554 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	AFG2	P32794	780 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	SLA2	P33338	968 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	GCS1	P35197	352 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	OCT1	P35999	772 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	VBA5	P36172	582 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	SEA4	P38164	1038 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	YEL068C	P39977	110 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	YER085C	P40058	173 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	STR2	P47164	639 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	TUB4	P53378	473 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	HDA1	P53973	706 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	BUD22	Q04347	519 aa	Known RBP	4.17	□□□□□ -1.74
NUP133	YKR082W	RPP0	P05317	312 aa	Known RBP	4.17	□□□□□ -1.74
NUP133	YKR082W	UTR1	P21373	530 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	ARE1	P25628	610 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	HXT1	P32465	570 aa		4.17	□□□□□ -1.74
NUP133	YKR082W	NCL1	P38205	684 aa	Known RBP	4.17	□□□□□ -1.74
NUP133	YKR082W	REV7	P38927	245 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms