RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	HOS1	Q12214	470 aa		11.93	□□□□□ -0.5
TCD2	YKL027W	PUP3	P25451	205 aa	Known RBP	11.92	□□□□□ -0.5
TCD2	YKL027W	NEM1	P38757	446 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	EXO1	P39875	702 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	DOT6	P40059	670 aa	Known RBP	11.92	□□□□□ -0.5
TCD2	YKL027W	CHS6	P40955	746 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	YJR039W	P47107	1121 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	IMP4	P53941	290 aa	Known RBP	11.92	□□□□□ -0.5
TCD2	YKL027W	COG6	P53959	839 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	YHM2	Q04013	314 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	NDD1	Q08887	554 aa		11.92	□□□□□ -0.5
TCD2	YKL027W	HIS5	P07172	385 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	CBF1	P17106	351 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	KIN3	P22209	435 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	KAR9	P32526	644 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	MRS6	P32864	603 aa	Known RBP	11.91	□□□□□ -0.5
TCD2	YKL027W	YHL041W	P38730	149 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	MED6	P38782	295 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	YNR063W	P53749	607 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	YSH1	Q06224	779 aa	Predicted RBP	11.91	□□□□□ -0.5
TCD2	YKL027W	PGC1	Q08959	321 aa		11.91	□□□□□ -0.5
TCD2	YKL027W	NOP58	Q12499	511 aa	Known RBP	11.91	□□□□□ -0.5
TCD2	YKL027W	ENO1	P00924	437 aa	Known RBP	11.9	□□□□□ -0.5
TCD2	YKL027W	ADH4	P10127	382 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	PYC1	P11154	1178 aa	Known RBP	11.9	□□□□□ -0.5
TCD2	YKL027W	ARF2	P19146	181 aa	Known RBP	11.9	□□□□□ -0.5
TCD2	YKL027W	TSR4	P25040	408 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	KES1	P35844	434 aa	Known RBP	11.9	□□□□□ -0.5
TCD2	YKL027W	APM3	P38153	483 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	YNR014W	P53719	212 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	MET14	Q02196	202 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	RLI1	Q03195	608 aa	Known RBP	11.9	□□□□□ -0.5
TCD2	YKL027W	YMR027W	Q04371	470 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	ARP9	Q05123	467 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	MPD2	Q99316	277 aa		11.9	□□□□□ -0.5
TCD2	YKL027W	CMD1	P06787	147 aa	Known RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	ERR1	P0CX10	437 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	ERR2	P0CX11	437 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	MIH1	P23748	554 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	PMI40	P29952	429 aa	Known RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	TPS2	P31688	896 aa	Known RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	HEM12	P32347	362 aa	Predicted RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	UTR2	P32623	467 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	YME1	P32795	747 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	SWE1	P32944	819 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	TYE7	P33122	291 aa	Predicted RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	DUN1	P39009	513 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	ELO3	P40319	345 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	ERR3	P42222	437 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	SAE2	P46946	345 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	TRF5	P48561	642 aa	Known RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	ASN2	P49090	572 aa	Known RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	YNR065C	P53751	1116 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	NSE1	Q07913	336 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	PEX15	Q08215	383 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	CLP1	Q08685	445 aa	Predicted RBP	11.89	□□□□□ -0.51
TCD2	YKL027W	OCA6	Q12454	224 aa		11.89	□□□□□ -0.51
TCD2	YKL027W	COX5A	P00424	153 aa		11.88	□□□□□ -0.51
TCD2	YKL027W	RPS14A	P06367	137 aa	Known RBP	11.88	□□□□□ -0.51
TCD2	YKL027W	URA7	P28274	579 aa	Known RBP	11.88	□□□□□ -0.51
TCD2	YKL027W	RPS14B	P39516	138 aa	Known RBP	11.88	□□□□□ -0.51
TCD2	YKL027W	IST3	P40565	148 aa	Predicted RBP	11.88	□□□□□ -0.51
TCD2	YKL027W	ERG10	P41338	398 aa	Known RBP	11.88	□□□□□ -0.51
TCD2	YKL027W	TAH11	P47112	604 aa		11.88	□□□□□ -0.51
TCD2	YKL027W	ATH1	P48016	1211 aa		11.88	□□□□□ -0.51
TCD2	YKL027W	YTP1	P53584	459 aa		11.88	□□□□□ -0.51
TCD2	YKL027W	CPR6	P53691	371 aa	Known RBP	11.88	□□□□□ -0.51
TCD2	YKL027W	SHR3	Q02774	210 aa		11.88	□□□□□ -0.51
TCD2	YKL027W	HEM15	P16622	393 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	DAL81	P21657	970 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	AAT2	P23542	418 aa	Known RBP	11.87	□□□□□ -0.51
TCD2	YKL027W	NDI1	P32340	513 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	PEX5	P35056	612 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	TGL4	P36165	910 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	YBP1	P38315	674 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	SMF2	P38778	549 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	CRP1	P38845	465 aa	Known RBP	11.87	□□□□□ -0.51
TCD2	YKL027W	DPH1	P40487	425 aa	Known RBP	11.87	□□□□□ -0.51
TCD2	YKL027W	SIW14	P53965	281 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	YMR160W	Q03823	816 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	PNP1	Q05788	311 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	LDB18	Q07887	179 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	YLR046C	Q12253	270 aa		11.87	□□□□□ -0.51
TCD2	YKL027W	HSF1	P10961	833 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	MRPL8	P22353	238 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	KAR4	P25583	335 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	AMA1	P50082	593 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	FLC3	P53121	802 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	CDC14	Q00684	551 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	SLU7	Q02775	382 aa	Known RBP	11.86	□□□□□ -0.51
TCD2	YKL027W	FRA1	Q07825	749 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	IRC10	Q08118	586 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	PEX11	Q12462	236 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	FUS1	P11710	512 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	SST2	P11972	698 aa	Known RBP	11.86	□□□□□ -0.51
TCD2	YKL027W	MUD2	P36084	527 aa	Known RBP	11.86	□□□□□ -0.51
TCD2	YKL027W	AIM23	P47015	356 aa		11.86	□□□□□ -0.51
TCD2	YKL027W	PYK2	P52489	506 aa	Known RBP	11.86	□□□□□ -0.51
TCD2	YKL027W	STR3	P53101	465 aa	Known RBP	11.86	□□□□□ -0.51
TCD2	YKL027W	GND2	P53319	492 aa		11.86	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms