RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeast

Gene CAP1, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAP1	YKL007W	TPO3	Q06451	622 aa		3.92	□□□□□ -1.78
CAP1	YKL007W	CYK3	Q07533	885 aa		3.92	□□□□□ -1.78
CAP1	YKL007W	YER175W-A	Q8TGU4	54 aa		3.92	□□□□□ -1.78
CAP1	YKL007W	PRE2	P30656	287 aa	Known RBP	3.91	□□□□□ -1.78
CAP1	YKL007W	GAT1	P43574	510 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	RSC9	Q03124	581 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	SND1	Q04007	877 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	PLM2	Q04383	521 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	LCB4	Q12246	624 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	FRE7	Q12333	620 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	YLR111W	Q12528	110 aa		3.91	□□□□□ -1.78
CAP1	YKL007W	PNO1	Q99216	274 aa	Known RBP	3.91	□□□□□ -1.78
CAP1	YKL007W	CET1	O13297	549 aa	Predicted RBP	3.9	□□□□□ -1.79
CAP1	YKL007W	AMD2	P22580	549 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	KES1	P35844	434 aa	Known RBP	3.9	□□□□□ -1.79
CAP1	YKL007W	YKL133C	P36066	463 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	IRC7	P43623	340 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	TAN1	P53072	289 aa	Predicted RBP	3.9	□□□□□ -1.79
CAP1	YKL007W	PEX8	P53248	589 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	YNL034W	P53963	612 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	ACS1	Q01574	713 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	CRF1	Q04930	467 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	YDL242W	Q07746	117 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	YPL191C	Q08930	360 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	RGT2	Q12300	763 aa		3.9	□□□□□ -1.79
CAP1	YKL007W	SST2	P11972	698 aa	Known RBP	3.89	□□□□□ -1.79
CAP1	YKL007W	RPS7A	P26786	190 aa	Known RBP	3.89	□□□□□ -1.79
CAP1	YKL007W	RPF2	P36160	344 aa	Known RBP	3.89	□□□□□ -1.79
CAP1	YKL007W	SPC97	P38863	823 aa		3.89	□□□□□ -1.79
CAP1	YKL007W	IMA5	P40884	581 aa		3.89	□□□□□ -1.79
CAP1	YKL007W	TGL2	P54857	326 aa		3.89	□□□□□ -1.79
CAP1	YKL007W	YML119W	Q03208	357 aa		3.89	□□□□□ -1.79
CAP1	YKL007W	AIM6	Q07716	390 aa		3.89	□□□□□ -1.79
CAP1	YKL007W	PRS5	Q12265	496 aa	Known RBP	3.89	□□□□□ -1.79
CAP1	YKL007W	YBR255C-A	Q3E776	120 aa		3.89	□□□□□ -1.79
CAP1	YKL007W	ILS1	P09436	1072 aa	Known RBP	3.88	□□□□□ -1.79
CAP1	YKL007W	PDE1	P22434	369 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	RRP43	P25359	394 aa	Predicted RBP	3.88	□□□□□ -1.79
CAP1	YKL007W	SIP1	P32578	815 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	GRX7	P38068	203 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	FTH1	P38310	465 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	SAP1	P39955	897 aa	Known RBP	3.88	□□□□□ -1.79
CAP1	YKL007W	ARB1	P40024	610 aa	Known RBP	3.88	□□□□□ -1.79
CAP1	YKL007W	JHD1	P40034	492 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	MNT3	P40549	630 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	MPD2	Q99316	277 aa		3.88	□□□□□ -1.79
CAP1	YKL007W	MAK32	P23060	363 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	VBA2	P38358	474 aa	Known RBP	3.87	□□□□□ -1.79
CAP1	YKL007W	ARO9	P38840	513 aa	Predicted RBP	3.87	□□□□□ -1.79
CAP1	YKL007W	VPS8	P39702	1274 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	TEP1	P53916	434 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	YAT1	P80235	687 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	CEG1	Q01159	459 aa	Predicted RBP	3.87	□□□□□ -1.79
CAP1	YKL007W	YPL108W	Q02872	168 aa	Predicted RBP	3.87	□□□□□ -1.79
CAP1	YKL007W	YML053C	Q04978	212 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	YOR389W	Q08912	624 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	CRC1	Q12289	327 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	YOL114C	Q12322	202 aa		3.87	□□□□□ -1.79
CAP1	YKL007W	CAB2	P40506	365 aa		3.86	□□□□□ -1.79
CAP1	YKL007W	CFD1	P40558	293 aa		3.86	□□□□□ -1.79
CAP1	YKL007W	ESF2	P53743	316 aa	Known RBP	3.86	□□□□□ -1.79
CAP1	YKL007W	MPS1	P54199	764 aa		3.86	□□□□□ -1.79
CAP1	YKL007W	SNU56	Q03782	492 aa	Known RBP	3.86	□□□□□ -1.79
CAP1	YKL007W	ARA2	Q04212	335 aa		3.86	□□□□□ -1.79
CAP1	YKL007W	MLC2	Q06580	163 aa		3.86	□□□□□ -1.79
CAP1	YKL007W	LYS21	Q12122	440 aa	Known RBP	3.86	□□□□□ -1.79
CAP1	YKL007W	ATP4	P05626	244 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	ILV2	P07342	687 aa	Known RBP	3.85	□□□□□ -1.79
CAP1	YKL007W	SIR1	P21691	654 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	ECM32	P32644	1121 aa	Known RBP	3.85	□□□□□ -1.79
CAP1	YKL007W	STT3	P39007	718 aa	Known RBP	3.85	□□□□□ -1.79
CAP1	YKL007W	PCI8	P40512	444 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	MAD3	P47074	515 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	ATG21	Q02887	496 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	MRPL1	Q04599	285 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	Q0010	Q9ZZX9	128 aa		3.85	□□□□□ -1.79
CAP1	YKL007W	SES1	P07284	462 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	MIS1	P09440	975 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	YMR085W	P0CF18	432 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	YAP1	P19880	650 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	COQ3	P27680	312 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	PTP2	P29461	750 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	FRD1	P32614	470 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	IMD2	P38697	523 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	VPS27	P40343	622 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	FAF1	P40546	346 aa	Predicted RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	CIN1	P40987	1014 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	IMD3	P50095	523 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	COP1	P53622	1201 aa	Known RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	MET14	Q02196	202 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	RAD34	Q06665	692 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	IWR1	Q07532	353 aa	Predicted RBP	3.84	□□□□□ -1.79
CAP1	YKL007W	RTC1	Q08281	1341 aa		3.84	□□□□□ -1.79
CAP1	YKL007W	YPR089W	O13585	888 aa		3.83	□□□□□ -1.8
CAP1	YKL007W	PTC6	P25646	442 aa		3.83	□□□□□ -1.8
CAP1	YKL007W	FUN12	P39730	1002 aa	Known RBP	3.83	□□□□□ -1.8
CAP1	YKL007W	YIL024C	P40543	189 aa		3.83	□□□□□ -1.8
CAP1	YKL007W	SKP2	P42843	763 aa		3.83	□□□□□ -1.8
CAP1	YKL007W	PAP2	P53632	584 aa	Known RBP	3.83	□□□□□ -1.8
CAP1	YKL007W	GEP3	Q08622	556 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms