RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSC84	YHR016C	SLA2	P33338	968 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	RDH54	P38086	958 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	IST1	P53843	298 aa	Predicted RBP	11.94	□□□□□ -0.5
YSC84	YHR016C	MAM3	Q12296	706 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	ATP2	P00830	511 aa	Known RBP	11.94	□□□□□ -0.5
YSC84	YHR016C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	11.94	□□□□□ -0.5	not detected
YSC84	YHR016C	AFT1	P22149	690 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	YKR078W	P36158	585 aa	Known RBP	11.94	□□□□□ -0.5
YSC84	YHR016C	OTU2	P38747	307 aa	Known RBP	11.94	□□□□□ -0.5
YSC84	YHR016C	RRN7	P40992	514 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	COG2	P53271	262 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	YET2	Q04210	160 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	THI20	Q08224	551 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	AAD15	Q08361	143 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	NRT1	Q08485	598 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	APC9	Q12107	265 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	HRT3	Q12347	344 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	CTF3	Q12748	733 aa		11.94	□□□□□ -0.5
YSC84	YHR016C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
YSC84	YHR016C	SAN1	P22470	610 aa		11.93	□□□□□ -0.5
YSC84	YHR016C	PMI40	P29952	429 aa	Known RBP	11.93	□□□□□ -0.5
YSC84	YHR016C	RPT1	P33299	467 aa	Known RBP	11.93	□□□□□ -0.5
YSC84	YHR016C	YER186C	P40101	306 aa		11.93	□□□□□ -0.5
YSC84	YHR016C	MAF1	P41910	395 aa		11.93	□□□□□ -0.5
YSC84	YHR016C	RSA3	Q05942	220 aa	Known RBP	11.93	□□□□□ -0.5
YSC84	YHR016C	YMR030W-A	Q3E760	96 aa		11.93	□□□□□ -0.5
YSC84	YHR016C	VPS34	P22543	875 aa		11.92	□□□□□ -0.5
YSC84	YHR016C	HRR25	P29295	494 aa	Known RBP	11.92	□□□□□ -0.5
YSC84	YHR016C	BEM3	P32873	1128 aa		11.92	□□□□□ -0.5
YSC84	YHR016C	TBS1	P38114	1094 aa		11.92	□□□□□ -0.5
YSC84	YHR016C	CRP1	P38845	465 aa	Known RBP	11.92	□□□□□ -0.5
YSC84	YHR016C	BUD32	P53323	261 aa		11.92	□□□□□ -0.5
YSC84	YHR016C	YTP1	P53584	459 aa		11.92	□□□□□ -0.5
YSC84	YHR016C	ALG11	P53954	548 aa	Known RBP	11.92	□□□□□ -0.5
YSC84	YHR016C	SLU7	Q02775	382 aa	Known RBP	11.92	□□□□□ -0.5
YSC84	YHR016C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	11.92	□□□□□ -0.5	not detected
YSC84	YHR016C	MSB1	P21339	1137 aa	Known RBP	11.91	□□□□□ -0.5
YSC84	YHR016C	VAC17	P25591	423 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	VPH2	P32341	215 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	RIM1	P32445	135 aa	Known RBP	11.91	□□□□□ -0.5
YSC84	YHR016C	LDH1	P38139	375 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	GGA2	P38817	585 aa	Known RBP	11.91	□□□□□ -0.5
YSC84	YHR016C	YAT2	P40017	923 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	TGL3	P40308	642 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	PDS1	P40316	373 aa	Predicted RBP	11.91	□□□□□ -0.5
YSC84	YHR016C	PFD1	P46988	109 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	YGR127W	P53275	312 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	PRO2	P54885	456 aa	Known RBP	11.91	□□□□□ -0.5
YSC84	YHR016C	MUB1	Q03162	620 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	DOT1	Q04089	582 aa	Known RBP	11.91	□□□□□ -0.5
YSC84	YHR016C	FAR10	Q06001	478 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	ENT4	Q07872	247 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	HOS1	Q12214	470 aa		11.91	□□□□□ -0.5
YSC84	YHR016C	YPR089W	O13585	888 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	ADE4	P04046	510 aa	Known RBP	11.9	□□□□□ -0.5
YSC84	YHR016C	HSP60	P19882	572 aa	Known RBP	11.9	□□□□□ -0.5
YSC84	YHR016C	AMD2	P22580	549 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	YCL068C	P25593	260 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	MSH2	P25847	964 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	TFC1	P32367	649 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	AIM26	P32858	118 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	UIP5	P36137	443 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	ATG12	P38316	186 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	PPE1	P38796	400 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	ISM1	P48526	1002 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	TEL2	P53038	688 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.9	□□□□□ -0.5	not detected
YSC84	YHR016C	VPS9	P54787	451 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	CDC123	Q05791	360 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	ASA1	Q06822	443 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	PEX15	Q08215	383 aa		11.9	□□□□□ -0.5
YSC84	YHR016C	TUB1	P09733	447 aa	Known RBP	11.89	□□□□□ -0.51
YSC84	YHR016C	INO1	P11986	533 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	TYR1	P20049	452 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	LRE1	P25579	583 aa	Known RBP	11.89	□□□□□ -0.51
YSC84	YHR016C	MSS51	P32335	436 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	DUR3	P33413	735 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	PEX5	P35056	612 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	PDX3	P38075	228 aa	Known RBP	11.89	□□□□□ -0.51
YSC84	YHR016C	SHU2	P38957	223 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	SEC31	P38968	1273 aa	Known RBP	11.89	□□□□□ -0.51
YSC84	YHR016C	INP51	P40559	946 aa	Known RBP	11.89	□□□□□ -0.51
YSC84	YHR016C	ASN2	P49090	572 aa	Known RBP	11.89	□□□□□ -0.51
YSC84	YHR016C	INA17	Q02888	182 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	RSC2	Q06488	889 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	GET4	Q12125	312 aa		11.89	□□□□□ -0.51
YSC84	YHR016C	CAR1	P00812	333 aa	Known RBP	11.88	□□□□□ -0.51
YSC84	YHR016C	STE6	P12866	1290 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	ADE2	P21264	571 aa	Known RBP	11.88	□□□□□ -0.51
YSC84	YHR016C	SMI1	P32566	505 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	GDA1	P32621	518 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	BIT2	P38346	545 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	BZZ1	P38822	633 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	PEX31	P53203	462 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	YPL062W	Q02781	134 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	SLD7	Q08457	257 aa		11.88	□□□□□ -0.51
YSC84	YHR016C	ENO1	P00924	437 aa	Known RBP	11.87	□□□□□ -0.51
YSC84	YHR016C	RHO2	P06781	192 aa		11.87	□□□□□ -0.51
YSC84	YHR016C	RAD51	P25454	400 aa		11.87	□□□□□ -0.51
YSC84	YHR016C	SPT16	P32558	1035 aa	Known RBP	11.87	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms