RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W RTT101P47050 842 aa8□□□□□ -1.13
SHC1YER096W RTA1P53047 317 aa8□□□□□ -1.13
SHC1YER096W TIM13P53299 105 aa8□□□□□ -1.13
SHC1YER096W COQ6P53318 479 aa8□□□□□ -1.13
SHC1YER096W KTR5P53966 522 aaPredicted RBP8□□□□□ -1.13
SHC1YER096W SLU7Q02775 382 aaKnown RBP8□□□□□ -1.13
SHC1YER096W RNY1Q02933 434 aaKnown RBP8□□□□□ -1.13
SHC1YER096W GRX8Q05926 109 aa8□□□□□ -1.13
SHC1YER096W MNL2Q12205 849 aa8□□□□□ -1.13
SHC1YER096W NCA2Q12374 616 aa8□□□□□ -1.13
SHC1YER096W SSC1P0CS90 654 aaKnown RBP7.99□□□□□ -1.13
SHC1YER096W KES1P35844 434 aaKnown RBP7.99□□□□□ -1.13
SHC1YER096W SPC97P38863 823 aa7.99□□□□□ -1.13
SHC1YER096W ASN2P49090 572 aaKnown RBP7.99□□□□□ -1.13
SHC1YER096W MRS2Q01926 470 aa7.99□□□□□ -1.13
SHC1YER096W SPO71Q03868 1245 aa7.99□□□□□ -1.13
SHC1YER096W ECM38Q05902 660 aaPredicted RBP7.99□□□□□ -1.13
SHC1YER096W YET3Q07451 203 aa7.99□□□□□ -1.13
SHC1YER096W AFI1Q99222 893 aa7.99□□□□□ -1.13
SHC1YER096W APE1P14904 514 aa7.98□□□□□ -1.13
SHC1YER096W GDA1P32621 518 aa7.98□□□□□ -1.13
SHC1YER096W MRS6P32864 603 aaKnown RBP7.98□□□□□ -1.13
SHC1YER096W SAF1P38352 637 aa7.98□□□□□ -1.13
SHC1YER096W MMF1P40185 145 aaKnown RBP7.98□□□□□ -1.13
SHC1YER096W BTT1P40314 149 aaPredicted RBP7.98□□□□□ -1.13
SHC1YER096W UFE1P41834 346 aa7.98□□□□□ -1.13
SHC1YER096W BIO4P53630 237 aa7.98□□□□□ -1.13
SHC1YER096W SLT2Q00772 484 aa7.98□□□□□ -1.13
SHC1YER096W ADI1Q03677 179 aa7.98□□□□□ -1.13
SHC1YER096W FAR8Q05040 523 aa7.98□□□□□ -1.13
SHC1YER096W YDL073WQ07454 984 aa7.98□□□□□ -1.13
SHC1YER096W AAD15Q08361 143 aa7.98□□□□□ -1.13
SHC1YER096W PBS2P08018 668 aa7.98□□□□□ -1.13
SHC1YER096W YMR085WP0CF18 432 aa7.98□□□□□ -1.13
SHC1YER096W MRPL25P23369 157 aa7.98□□□□□ -1.13
SHC1YER096W PPH22P23595 377 aa7.98□□□□□ -1.13
SHC1YER096W SEC6P32844 805 aa7.98□□□□□ -1.13
SHC1YER096W YBR062CP38239 180 aa7.98□□□□□ -1.13
SHC1YER096W GDT1P38301 280 aaPredicted RBP7.98□□□□□ -1.13
SHC1YER096W STS1P38637 319 aa7.98□□□□□ -1.13
SHC1YER096W OAF1P39720 1047 aaPredicted RBP7.98□□□□□ -1.13
SHC1YER096W PXA1P41909 870 aa7.98□□□□□ -1.13
SHC1YER096W TRS85P46944 698 aa7.98□□□□□ -1.13
SHC1YER096W YJL132WP47014 750 aa7.98□□□□□ -1.13
SHC1YER096W CCT8P47079 568 aaKnown RBP7.98□□□□□ -1.13
SHC1YER096W MSH6Q03834 1242 aa7.98□□□□□ -1.13
SHC1YER096W SPE3Q12074 293 aaKnown RBP7.98□□□□□ -1.13
SHC1YER096W SLP1Q12232 587 aa7.98□□□□□ -1.13
SHC1YER096W YDR034W-BQ6Q5X2 51 aa7.98□□□□□ -1.13
SHC1YER096W IDI1P15496 288 aa7.97□□□□□ -1.13
SHC1YER096W URA10P30402 227 aa7.97□□□□□ -1.13
SHC1YER096W SET3P36124 751 aa7.97□□□□□ -1.13
SHC1YER096W EDS1P38073 919 aa7.97□□□□□ -1.13
SHC1YER096W MEF2P39677 819 aa7.97□□□□□ -1.13
SHC1YER096W PFK26P40433 827 aaKnown RBP7.97□□□□□ -1.13
SHC1YER096W DPH1P40487 425 aaKnown RBP7.97□□□□□ -1.13
SHC1YER096W YJL107CP42947 387 aa7.97□□□□□ -1.13
SHC1YER096W DLD2P46681 530 aaKnown RBP7.97□□□□□ -1.13
SHC1YER096W BFA1P47113 574 aa7.97□□□□□ -1.13
SHC1YER096W MRX6P48564 524 aa7.97□□□□□ -1.13
SHC1YER096W PCL10P53124 433 aa7.97□□□□□ -1.13
SHC1YER096W HST2P53686 357 aa7.97□□□□□ -1.13
SHC1YER096W ENT5Q03769 411 aaKnown RBP7.97□□□□□ -1.13
SHC1YER096W YCS4Q06156 1176 aa7.97□□□□□ -1.13
SHC1YER096W BUD20Q08004 166 aaPredicted RBP7.97□□□□□ -1.13
SHC1YER096W LDB17Q12342 491 aa7.97□□□□□ -1.13
SHC1YER096W UBR1P19812 1950 aa7.97□□□□□ -1.13
SHC1YER096W ERG20P08524 352 aaKnown RBP7.96□□□□□ -1.14
SHC1YER096W INO1P11986 533 aa7.96□□□□□ -1.14
SHC1YER096W MTF1P14908 341 aaKnown RBP7.96□□□□□ -1.14
SHC1YER096W HSP26P15992 214 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
SHC1YER096W YCL068CP25593 260 aa7.96□□□□□ -1.14
SHC1YER096W KAR9P32526 644 aa7.96□□□□□ -1.14
SHC1YER096W SMI1P32566 505 aa7.96□□□□□ -1.14
SHC1YER096W POL12P38121 705 aaPredicted RBP7.96□□□□□ -1.14
SHC1YER096W FUI1P38196 639 aa7.96□□□□□ -1.14
SHC1YER096W ELO3P40319 345 aa7.96□□□□□ -1.14
SHC1YER096W YIL161WP40449 235 aaKnown RBP7.96□□□□□ -1.14
SHC1YER096W DSN1P40568 576 aa7.96□□□□□ -1.14
SHC1YER096W PRP24P49960 444 aaKnown RBP7.96□□□□□ -1.14
SHC1YER096W AMA1P50082 593 aa7.96□□□□□ -1.14
SHC1YER096W PSP1P50896 841 aaKnown RBP7.96□□□□□ -1.14
SHC1YER096W UBX4P54730 416 aa7.96□□□□□ -1.14
SHC1YER096W YLR053CQ12026 108 aa7.96□□□□□ -1.14
SHC1YER096W ACO1P19414 778 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
SHC1YER096W AMS1P22855 1083 aa7.95□□□□□ -1.14
SHC1YER096W AAT2P23542 418 aaKnown RBP7.95□□□□□ -1.14
SHC1YER096W PEX34P25584 144 aa7.95□□□□□ -1.14
SHC1YER096W MCM5P29496 775 aaKnown RBP7.95□□□□□ -1.14
SHC1YER096W PEX28P38848 579 aa7.95□□□□□ -1.14
SHC1YER096W ROK1P45818 564 aaPredicted RBP7.95□□□□□ -1.14
SHC1YER096W YGL140CP53120 1219 aa7.95□□□□□ -1.14
SHC1YER096W COP1P53622 1201 aaKnown RBP7.95□□□□□ -1.14
SHC1YER096W NDD1Q08887 554 aa7.95□□□□□ -1.14
SHC1YER096W CLN1P20437 546 aa7.94□□□□□ -1.14
SHC1YER096W SEC14P24280 304 aaKnown RBP7.94□□□□□ -1.14
SHC1YER096W SLX5P32828 619 aaKnown RBP7.94□□□□□ -1.14
SHC1YER096W CYM1P32898 989 aa7.94□□□□□ -1.14
SHC1YER096W YHI9P38765 294 aa7.94□□□□□ -1.14
SHC1YER096W TDA10P42938 290 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms