RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C RPO41P13433 1351 aaKnown RBP5.09□□□□□ -1.59
RPB7YDR404C MIS1P09440 975 aaKnown RBP5.09□□□□□ -1.59
RPB7YDR404C MTF2P10849 440 aa5.09□□□□□ -1.59
RPB7YDR404C CAF20P12962 161 aaKnown RBP5.09□□□□□ -1.59
RPB7YDR404C CLB4P24871 460 aa5.09□□□□□ -1.59
RPB7YDR404C SWI4P25302 1093 aaKnown RBP5.09□□□□□ -1.59
RPB7YDR404C ERG4P25340 473 aa5.09□□□□□ -1.59
RPB7YDR404C RPN12P32496 274 aa5.09□□□□□ -1.59
RPB7YDR404C XRS2P33301 854 aa5.09□□□□□ -1.59
RPB7YDR404C RRN3P36070 627 aa5.09□□□□□ -1.59
RPB7YDR404C YBR138CP38277 524 aa5.09□□□□□ -1.59
RPB7YDR404C EHT1P38295 451 aa5.09□□□□□ -1.59
RPB7YDR404C SFB3P38810 929 aa5.09□□□□□ -1.59
RPB7YDR404C MNT3P40549 630 aa5.09□□□□□ -1.59
RPB7YDR404C MEP3P53390 489 aa5.09□□□□□ -1.59
RPB7YDR404C OPY2Q06810 360 aa5.09□□□□□ -1.59
RPB7YDR404C IWR1Q07532 353 aaPredicted RBP5.09□□□□□ -1.59
RPB7YDR404C YLR040CQ07988 224 aa5.09□□□□□ -1.59
RPB7YDR404C YOL073CQ08232 322 aa5.09□□□□□ -1.59
RPB7YDR404C MET3P08536 511 aa5.08□□□□□ -1.6
RPB7YDR404C FRD1P32614 470 aaKnown RBP5.08□□□□□ -1.6
RPB7YDR404C ELO3P40319 345 aa5.08□□□□□ -1.6
RPB7YDR404C GSM1P42950 618 aa5.08□□□□□ -1.6
RPB7YDR404C BNA1P47096 177 aa5.08□□□□□ -1.6
RPB7YDR404C BUL1P48524 976 aa5.08□□□□□ -1.6
RPB7YDR404C RFX1P48743 811 aa5.08□□□□□ -1.6
RPB7YDR404C RNT1Q02555 471 aa5.08□□□□□ -1.6
RPB7YDR404C FDC1Q03034 503 aa5.08□□□□□ -1.6
RPB7YDR404C YMR018WQ04364 514 aa5.08□□□□□ -1.6
RPB7YDR404C CRD1Q07560 283 aa5.08□□□□□ -1.6
RPB7YDR404C RRI2Q12348 645 aa5.08□□□□□ -1.6
RPB7YDR404C TRM13Q12383 476 aa5.08□□□□□ -1.6
RPB7YDR404C TUF1P02992 437 aaKnown RBP5.07□□□□□ -1.6
RPB7YDR404C UBC1P21734 215 aaKnown RBP5.07□□□□□ -1.6
RPB7YDR404C RER1P25560 188 aa5.07□□□□□ -1.6
RPB7YDR404C MVD1P32377 396 aaKnown RBP5.07□□□□□ -1.6
RPB7YDR404C OAR1P35731 278 aa5.07□□□□□ -1.6
RPB7YDR404C TMN3P40071 706 aa5.07□□□□□ -1.6
RPB7YDR404C PIG2P40187 538 aa5.07□□□□□ -1.6
RPB7YDR404C RAD26P40352 1085 aa5.07□□□□□ -1.6
RPB7YDR404C PSF2P40359 213 aa5.07□□□□□ -1.6
RPB7YDR404C TIM50Q02776 476 aa5.07□□□□□ -1.6
RPB7YDR404C YDR056CQ12025 205 aa5.07□□□□□ -1.6
RPB7YDR404C IKI3Q06706 1349 aaKnown RBP5.06□□□□□ -1.6
RPB7YDR404C ADE3P07245 946 aaKnown RBP5.06□□□□□ -1.6
RPB7YDR404C RIT1P23796 513 aa5.06□□□□□ -1.6
RPB7YDR404C CHS3P29465 1165 aa5.06□□□□□ -1.6
RPB7YDR404C SLC1P33333 303 aa5.06□□□□□ -1.6
RPB7YDR404C BCD1P38772 366 aa5.06□□□□□ -1.6
RPB7YDR404C UBC11P52492 156 aa5.06□□□□□ -1.6
RPB7YDR404C ENT2Q05785 613 aa5.06□□□□□ -1.6
RPB7YDR404C IRC13Q08630 104 aa5.06□□□□□ -1.6
RPB7YDR404C CHS5Q12114 671 aaKnown RBP5.06□□□□□ -1.6
RPB7YDR404C CLF1Q12309 687 aaPredicted RBP5.06□□□□□ -1.6
RPB7YDR404C ZRT2Q12436 422 aa5.06□□□□□ -1.6
RPB7YDR404C SNF1P06782 633 aaKnown RBP5.05□□□□□ -1.6
RPB7YDR404C PRP28P23394 588 aa5.05□□□□□ -1.6
RPB7YDR404C SMY1P32364 656 aaKnown RBP5.05□□□□□ -1.6
RPB7YDR404C MOH1P38191 138 aa5.05□□□□□ -1.6
RPB7YDR404C IFA38P38286 347 aa5.05□□□□□ -1.6
RPB7YDR404C HRB1P38922 454 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
RPB7YDR404C KAP123P40069 1113 aaKnown RBP5.05□□□□□ -1.6
RPB7YDR404C FAF1P40546 346 aaPredicted RBP5.05□□□□□ -1.6
RPB7YDR404C POL31P46957 487 aa5.05□□□□□ -1.6
RPB7YDR404C RRT6P53117 311 aaPredicted RBP5.05□□□□□ -1.6
RPB7YDR404C TIM44Q01852 431 aa5.05□□□□□ -1.6
RPB7YDR404C TFC6Q06339 672 aa5.05□□□□□ -1.6
RPB7YDR404C CTI6Q08923 506 aa5.05□□□□□ -1.6
RPB7YDR404C PMD1P32634 1753 aa5.04□□□□□ -1.6
RPB7YDR404C ALG7P07286 448 aa5.04□□□□□ -1.6
RPB7YDR404C PCK1P10963 549 aa5.04□□□□□ -1.6
RPB7YDR404C ICL1P28240 557 aaPredicted RBP5.04□□□□□ -1.6
RPB7YDR404C MSS1P32559 526 aaPredicted RBP5.04□□□□□ -1.6
RPB7YDR404C SET3P36124 751 aa5.04□□□□□ -1.6
RPB7YDR404C VFA1P40080 203 aa5.04□□□□□ -1.6
RPB7YDR404C LRO1P40345 661 aa5.04□□□□□ -1.6
RPB7YDR404C CAB2P40506 365 aa5.04□□□□□ -1.6
RPB7YDR404C YJL163CP46996 555 aa5.04□□□□□ -1.6
RPB7YDR404C PAN2P53010 1115 aaPredicted RBP5.04□□□□□ -1.6
RPB7YDR404C TRS31Q03337 283 aa5.04□□□□□ -1.6
RPB7YDR404C YMR206WQ03695 313 aa5.04□□□□□ -1.6
RPB7YDR404C ARA2Q04212 335 aa5.04□□□□□ -1.6
RPB7YDR404C VID22Q05934 901 aa5.04□□□□□ -1.6
RPB7YDR404C ARR3Q06598 404 aa5.04□□□□□ -1.6
RPB7YDR404C TRM8Q12009 286 aa5.04□□□□□ -1.6
RPB7YDR404C YLL067CQ07888 1374 aa5.04□□□□□ -1.6
RPB7YDR404C YLL066CQ99208 1374 aa5.04□□□□□ -1.6
RPB7YDR404C SEC12P11655 471 aa5.03□□□□□ -1.6
RPB7YDR404C VPS33P20795 691 aa5.03□□□□□ -1.6
RPB7YDR404C ARP2P32381 391 aaKnown RBP5.03□□□□□ -1.6
RPB7YDR404C HIS7P33734 552 aaKnown RBP5.03□□□□□ -1.6
RPB7YDR404C STB5P38699 743 aa5.03□□□□□ -1.6
RPB7YDR404C REV7P38927 245 aa5.03□□□□□ -1.6
RPB7YDR404C AXL2P38928 823 aa5.03□□□□□ -1.6
RPB7YDR404C YJL193WP39542 402 aa5.03□□□□□ -1.6
RPB7YDR404C YIL089WP40500 205 aa5.03□□□□□ -1.6
RPB7YDR404C MPS3P47069 682 aa5.03□□□□□ -1.6
RPB7YDR404C CTF18P49956 741 aa5.03□□□□□ -1.6
RPB7YDR404C IMA1P53051 589 aa5.03□□□□□ -1.6
RPB7YDR404C YGR054WP53235 642 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms