RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	APC5	Q08683	685 aa		5	□□□□□ -1.61
ROT2	YBR229C	STB3	Q12427	513 aa		5	□□□□□ -1.61
ROT2	YBR229C	CTF3	Q12748	733 aa		5	□□□□□ -1.61
ROT2	YBR229C	SAN1	P22470	610 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	GFD2	P25370	566 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	RAD51	P25454	400 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	AGP2	P38090	596 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	FLR1	P38124	548 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	NMD3	P38861	518 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	CCT7	P42943	550 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	YJL132W	P47014	750 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	VMA10	P48836	114 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	SCS3	P53012	380 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	BUD32	P53323	261 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	ALG11	P53954	548 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	CWC21	Q03375	135 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	MCH5	Q08777	521 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	ATG11	Q12527	1178 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	YDR461C-A	Q2V2P7	80 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	MEF1	P25039	761 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	SPT16	P32558	1035 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	UTR2	P32623	467 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	RGT1	P32862	1170 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	SRP101	P32916	621 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	YAT2	P40017	923 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	PDS1	P40316	373 aa	Predicted RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	GCN20	P43535	752 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	MNN11	P46985	422 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	ADE12	P80210	433 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	YPL062W	Q02781	134 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	DOT1	Q04089	582 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	AAD15	Q08361	143 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	SPE3	Q12074	293 aa	Known RBP	4.99	□□□□□ -1.61
ROT2	YBR229C	YMR030W-A	Q3E760	96 aa		4.99	□□□□□ -1.61
ROT2	YBR229C	MAS2	P11914	482 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	POX1	P13711	748 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	GIP1	P38229	639 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ATG12	P38316	186 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	YBR259W	P38338	688 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	PPE1	P38796	400 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	PFD1	P46988	109 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	TRF5	P48561	642 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	YGL108C	P53139	140 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	PRO2	P54885	456 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	YET2	Q04210	160 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	APC9	Q12107	265 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	CAR1	P00812	333 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	RHO2	P06781	192 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	HSC82	P15108	705 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	HEM12	P32347	362 aa	Predicted RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	AEP1	P32493	518 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	BIT2	P38346	545 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	KSP1	P38691	1029 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	GGA2	P38817	585 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	SEC31	P38968	1273 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	FIR1	P40020	876 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	TGL3	P40308	642 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	SEC28	P40509	296 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	LAM5	P43560	674 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ASN2	P49090	572 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	MUB1	Q03162	620 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ENT4	Q07872	247 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
ROT2	YBR229C	TYW1	Q08960	810 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	TY3A-G	Q12173	290 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ADF1	Q2V2Q1	113 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	TY3A-I	Q99219	290 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ENO1	P00924	437 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	AFT1	P22149	690 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	VAC17	P25591	423 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	YCL068C	P25593	260 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	MSS51	P32335	436 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	TBS1	P38114	1094 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	YGR127W	P53275	312 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ATG26	Q06321	1198 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	ASA1	Q06822	443 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	PSR1	Q07800	427 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	SLD7	Q08457	257 aa		4.98	□□□□□ -1.61
ROT2	YBR229C	EFG1	Q3E705	233 aa	Known RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	HSH49	Q99181	213 aa	Predicted RBP	4.98	□□□□□ -1.61
ROT2	YBR229C	STE2	D6VTK4	431 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	YPR089W	O13585	888 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	TUB1	P09733	447 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	ATR1	P13090	542 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	RGR1	P19263	1082 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	ECM4	P36156	370 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	PDX3	P38075	228 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	YAP1801	P38856	637 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	CUS2	P53830	285 aa	Predicted RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	SLU7	Q02775	382 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	SKY1	Q03656	742 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	INP2	Q03824	705 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	SPC2	Q04969	178 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	ARP9	Q05123	467 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	VPS34	P22543	875 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	LRE1	P25579	583 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	ZIP1	P31111	875 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	GDA1	P32621	518 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
ROT2	YBR229C	ARN1	P38731	627 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 125.8 ms